RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 XBP1P17861 261 aa16.92■□□□□ 0.3
GCFC2-211ENST00000541687 TYRO3Q06418 890 aa16.92■□□□□ 0.3
GCFC2-211ENST00000541687 ZSCAN25Q6NSZ9 544 aa16.92■□□□□ 0.3
GCFC2-211ENST00000541687 RAI14Q9P0K7 980 aa16.92■□□□□ 0.3
GCFC2-211ENST00000541687 TULP4Q9NRJ4 1543 aa16.92■□□□□ 0.3
GCFC2-211ENST00000541687 FAM200AQ8TCP9 573 aa16.92■□□□□ 0.3
GCFC2-211ENST00000541687 EAF2Q96CJ1 260 aaPredicted RBP16.92■□□□□ 0.3
GCFC2-211ENST00000541687 IBTKQ9P2D0 1353 aaPredicted RBP16.92■□□□□ 0.3
GCFC2-211ENST00000541687 ATP7BP35670 1465 aa16.92■□□□□ 0.3
GCFC2-211ENST00000541687 KLF18A0A0U1RQI7 1052 aa16.92■□□□□ 0.3
GCFC2-211ENST00000541687 PDCL3Q9H2J4 239 aa16.92■□□□□ 0.3
GCFC2-211ENST00000541687 NSFL1CQ9UNZ2 370 aaKnown RBP16.92■□□□□ 0.3
GCFC2-211ENST00000541687 NUTM2BA6NNL0 878 aaPredicted RBP16.91■□□□□ 0.3
GCFC2-211ENST00000541687 NUTM2EB1AL46 878 aaPredicted RBP16.91■□□□□ 0.3
GCFC2-211ENST00000541687 BEND3Q5T5X7 828 aa16.91■□□□□ 0.3
GCFC2-211ENST00000541687 NUTM2AQ8IVF1 878 aaPredicted RBP16.91■□□□□ 0.3
GCFC2-211ENST00000541687 ZNF496Q96IT1 587 aaPredicted RBP16.91■□□□□ 0.3
GCFC2-211ENST00000541687 KIF2CQ99661 725 aa16.91■□□□□ 0.3
GCFC2-211ENST00000541687 NAPBQ9H115 298 aa16.91■□□□□ 0.3
GCFC2-211ENST00000541687 ANKRD20A12PQ8NF67 263 aa16.91■□□□□ 0.3
GCFC2-211ENST00000541687 PKNOX2Q96KN3 472 aa16.91■□□□□ 0.3
GCFC2-211ENST00000541687 UBAC1Q9BSL1 405 aa16.91■□□□□ 0.3
GCFC2-211ENST00000541687 PAG1Q9NWQ8 432 aa16.91■□□□□ 0.3
GCFC2-211ENST00000541687 ADCK5Q3MIX3 580 aa16.9■□□□□ 0.3
GCFC2-211ENST00000541687 HSP90AA4PQ58FG1 418 aa16.9■□□□□ 0.3
GCFC2-211ENST00000541687 ZNF594Q96JF6 807 aaPredicted RBP16.9■□□□□ 0.3
GCFC2-211ENST00000541687 CEP89Q96ST8 783 aa16.9■□□□□ 0.3
GCFC2-211ENST00000541687 NOL7Q9UMY1 257 aaKnown RBP16.9■□□□□ 0.3
GCFC2-211ENST00000541687 IPO7O95373 1038 aaKnown RBP16.9■□□□□ 0.3
GCFC2-211ENST00000541687 PTCH1Q13635 1447 aa16.9■□□□□ 0.3
GCFC2-211ENST00000541687 PTPN14Q15678 1187 aa16.9■□□□□ 0.3
GCFC2-211ENST00000541687 NOL10Q9BSC4 688 aaKnown RBP16.9■□□□□ 0.3
GCFC2-211ENST00000541687 NCOA5Q9HCD5 579 aaKnown RBP16.9■□□□□ 0.3
GCFC2-211ENST00000541687 GIGYF1O75420 1035 aaPredicted RBP16.89■□□□□ 0.3
GCFC2-211ENST00000541687 CDKL5O76039 1030 aa16.89■□□□□ 0.3
GCFC2-211ENST00000541687 PTGS1P23219 599 aa16.89■□□□□ 0.3
GCFC2-211ENST00000541687 ME3Q16798 604 aa16.89■□□□□ 0.3
GCFC2-211ENST00000541687 CDC37L1Q7L3B6 337 aa16.89■□□□□ 0.3
GCFC2-211ENST00000541687 SIRT1Q96EB6 747 aa16.89■□□□□ 0.29
GCFC2-211ENST00000541687 BRMS1Q9HCU9 246 aa16.89■□□□□ 0.29
GCFC2-211ENST00000541687 JAK2O60674 1132 aa16.89■□□□□ 0.29
GCFC2-211ENST00000541687 IQSEC3Q9UPP2 1182 aaPredicted RBP16.89■□□□□ 0.29
GCFC2-211ENST00000541687 ADGRB3O60242 1522 aa16.89■□□□□ 0.29
GCFC2-211ENST00000541687 LAMC1P11047 1609 aa16.89■□□□□ 0.29
GCFC2-211ENST00000541687 IGSF1Q8N6C5 1336 aa16.89■□□□□ 0.29
GCFC2-211ENST00000541687 SPDYE4A6NLX3 237 aa16.89■□□□□ 0.29
GCFC2-211ENST00000541687 SFPQP23246 707 aaKnown RBP eCLIP16.89■□□□□ 0.29
GCFC2-211ENST00000541687 QRICH2Q9H0J4 1663 aa16.89■□□□□ 0.29
GCFC2-211ENST00000541687 RXRAP19793 462 aa16.88■□□□□ 0.29
GCFC2-211ENST00000541687 TEX35Q5T0J7 233 aa16.88■□□□□ 0.29
GCFC2-211ENST00000541687 KLHL10Q6JEL2 608 aa16.88■□□□□ 0.29
GCFC2-211ENST00000541687 AMOTL1Q8IY63 956 aa16.88■□□□□ 0.29
GCFC2-211ENST00000541687 PNPLA6Q8IY17 1366 aa16.88■□□□□ 0.29
GCFC2-211ENST00000541687 A0A0D9SFI3 127 aa16.88■□□□□ 0.29
GCFC2-211ENST00000541687 IFIT3O14879 490 aaKnown RBP16.88■□□□□ 0.29
GCFC2-211ENST00000541687 SLC3A2P08195 630 aaKnown RBP16.88■□□□□ 0.29
GCFC2-211ENST00000541687 MARCKSP29966 332 aaPredicted RBP16.88■□□□□ 0.29
GCFC2-211ENST00000541687 HELBQ8NG08 1087 aaPredicted RBP16.88■□□□□ 0.29
GCFC2-211ENST00000541687 ZCRB1Q8TBF4 217 aaKnown RBP16.88■□□□□ 0.29
GCFC2-211ENST00000541687 SEC62Q99442 399 aaKnown RBP16.88■□□□□ 0.29
GCFC2-211ENST00000541687 OSBPL3Q9H4L5 887 aa16.88■□□□□ 0.29
GCFC2-211ENST00000541687 USP6P35125 1406 aa16.88■□□□□ 0.29
GCFC2-211ENST00000541687 TMX1Q9H3N1 280 aa16.87■□□□□ 0.29
GCFC2-211ENST00000541687 CEP152O94986 1710 aa16.87■□□□□ 0.29
GCFC2-211ENST00000541687 PTPDC1A2A3K4 754 aa16.87■□□□□ 0.29
GCFC2-211ENST00000541687 RPS6KB1P23443 525 aa16.87■□□□□ 0.29
GCFC2-211ENST00000541687 TNNI3KQ59H18 835 aa16.87■□□□□ 0.29
GCFC2-211ENST00000541687 FPGT-TNNI3KV9GXZ4 949 aa16.87■□□□□ 0.29
GCFC2-211ENST00000541687 LRRC7Q96NW7 1537 aa16.87■□□□□ 0.29
GCFC2-211ENST00000541687 NPHP3Q7Z494 1330 aa16.87■□□□□ 0.29
GCFC2-211ENST00000541687 A1BGP04217 495 aa16.87■□□□□ 0.29
GCFC2-211ENST00000541687 ZSCAN16Q9H4T2 348 aaPredicted RBP16.87■□□□□ 0.29
GCFC2-211ENST00000541687 ANKRD18BA2A2Z9 1011 aa16.87■□□□□ 0.29
GCFC2-211ENST00000541687 GCKRQ14397 625 aa16.87■□□□□ 0.29
GCFC2-211ENST00000541687 OTUD7BQ6GQQ9 843 aa16.87■□□□□ 0.29
GCFC2-211ENST00000541687 BABAM1Q9NWV8 329 aa16.87■□□□□ 0.29
GCFC2-211ENST00000541687 TLR7Q9NYK1 1049 aaKnown RBP16.87■□□□□ 0.29
GCFC2-211ENST00000541687 HOXB7P09629 217 aa16.86■□□□□ 0.29
GCFC2-211ENST00000541687 STX1AQ16623 288 aa16.86■□□□□ 0.29
GCFC2-211ENST00000541687 TMC6Q7Z403 805 aa16.86■□□□□ 0.29
GCFC2-211ENST00000541687 ARGLU1Q9NWB6 273 aaPredicted RBP16.86■□□□□ 0.29
GCFC2-211ENST00000541687 GOLGA8AA7E2F4 631 aa16.86■□□□□ 0.29
GCFC2-211ENST00000541687 HS1BP3Q53T59 392 aa16.86■□□□□ 0.29
GCFC2-211ENST00000541687 CDK12Q9NYV4 1490 aaPredicted RBP16.86■□□□□ 0.29
GCFC2-211ENST00000541687 PPRC1Q5VV67 1664 aaKnown RBP16.86■□□□□ 0.29
GCFC2-211ENST00000541687 AOX1Q06278 1338 aa16.86■□□□□ 0.29
GCFC2-211ENST00000541687 ARAP3Q8WWN8 1544 aa16.86■□□□□ 0.29
GCFC2-211ENST00000541687 IL15P40933 162 aaPredicted RBP16.86■□□□□ 0.29
GCFC2-211ENST00000541687 TSC1Q92574 1164 aa16.86■□□□□ 0.29
GCFC2-211ENST00000541687 METTL22Q9BUU2 404 aaPredicted RBP16.86■□□□□ 0.29
GCFC2-211ENST00000541687 FAM89AQ96GI7 184 aa16.85■□□□□ 0.29
GCFC2-211ENST00000541687 SLC12A7Q9Y666 1083 aa16.85■□□□□ 0.29
GCFC2-211ENST00000541687 NCOA7Q8NI08 942 aa16.85■□□□□ 0.29
GCFC2-211ENST00000541687 ERCC4Q92889 916 aaPredicted RBP16.85■□□□□ 0.29
GCFC2-211ENST00000541687 SLC9C2Q5TAH2 1124 aa16.85■□□□□ 0.29
GCFC2-211ENST00000541687 STAP2Q9UGK3 403 aa16.85■□□□□ 0.29
GCFC2-211ENST00000541687 TPCN1Q9ULQ1 816 aa16.85■□□□□ 0.29
GCFC2-211ENST00000541687 DYNC1I1O14576 645 aa16.84■□□□□ 0.29
GCFC2-211ENST00000541687 IGHMBP2P38935 993 aaKnown RBP16.84■□□□□ 0.29
GCFC2-211ENST00000541687 ATP2B3Q16720 1220 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms