RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 ZBTB12Q9Y330 459 aaPredicted RBP20.76■□□□□ 0.91
PUDP-206ENST00000540122 ABCC4O15439 1325 aa20.76■□□□□ 0.91
PUDP-206ENST00000540122 EGFRP00533 1210 aa20.75■□□□□ 0.91
PUDP-206ENST00000540122 TBC1D10BQ4KMP7 808 aaPredicted RBP20.75■□□□□ 0.91
PUDP-206ENST00000540122 HSPA5P11021 654 aaKnown RBP20.74■□□□□ 0.91
PUDP-206ENST00000540122 RASAL3Q86YV0 1011 aa20.74■□□□□ 0.91
PUDP-206ENST00000540122 MPNDQ8N594 471 aa20.74■□□□□ 0.91
PUDP-206ENST00000540122 ZNF296Q8WUU4 475 aaPredicted RBP20.74■□□□□ 0.91
PUDP-206ENST00000540122 DPF2Q92785 391 aa20.74■□□□□ 0.91
PUDP-206ENST00000540122 DCPSQ96C86 337 aaKnown RBP20.74■□□□□ 0.91
PUDP-206ENST00000540122 MKI67P46013 3256 aaKnown RBP20.74■□□□□ 0.91
PUDP-206ENST00000540122 NUP98P52948 1817 aa20.74■□□□□ 0.91
PUDP-206ENST00000540122 FXR1P51114 621 aaKnown RBP eCLIP20.73■□□□□ 0.91
PUDP-206ENST00000540122 KIF6Q6ZMV9 814 aa20.73■□□□□ 0.91
PUDP-206ENST00000540122 TTLL7Q6ZT98 887 aa20.73■□□□□ 0.91
PUDP-206ENST00000540122 NLRP3Q96P20 1036 aa20.73■□□□□ 0.91
PUDP-206ENST00000540122 EIF4G2P78344 907 aaKnown RBP eCLIP20.72■□□□□ 0.91
PUDP-206ENST00000540122 MCM10Q7L590 875 aa20.72■□□□□ 0.91
PUDP-206ENST00000540122 SP8Q8IXZ3 490 aa20.72■□□□□ 0.91
PUDP-206ENST00000540122 ZNF34Q8IZ26 560 aa20.72■□□□□ 0.91
PUDP-206ENST00000540122 ZBTB3Q9H5J0 574 aa20.72■□□□□ 0.91
PUDP-206ENST00000540122 FBXO46Q6PJ61 603 aaPredicted RBP20.71■□□□□ 0.91
PUDP-206ENST00000540122 LAMB4A4D0S4 1761 aa20.71■□□□□ 0.91
PUDP-206ENST00000540122 PSMD14O00487 310 aa20.7■□□□□ 0.9
PUDP-206ENST00000540122 BBOX1O75936 387 aa20.7■□□□□ 0.9
PUDP-206ENST00000540122 TBC1D8O95759 1140 aa20.7■□□□□ 0.9
PUDP-206ENST00000540122 PRKAR2BP31323 418 aa20.7■□□□□ 0.9
PUDP-206ENST00000540122 RBM26Q5T8P6 1007 aaKnown RBP20.7■□□□□ 0.9
PUDP-206ENST00000540122 RTF1Q92541 710 aaKnown RBP20.69■□□□□ 0.9
PUDP-206ENST00000540122 CDCA5Q96FF9 252 aa20.69■□□□□ 0.9
PUDP-206ENST00000540122 DUOX1Q9NRD9 1551 aa20.68■□□□□ 0.9
PUDP-206ENST00000540122 PPP1R42Q7Z4L9 355 aa20.68■□□□□ 0.9
PUDP-206ENST00000540122 SULF1Q8IWU6 871 aa20.68■□□□□ 0.9
PUDP-206ENST00000540122 RSPH6AQ9H0K4 717 aa20.68■□□□□ 0.9
PUDP-206ENST00000540122 GGA3Q9NZ52 723 aa20.68■□□□□ 0.9
PUDP-206ENST00000540122 DCTN1Q14203 1278 aa20.67■□□□□ 0.9
PUDP-206ENST00000540122 SLC10A5Q5PT55 438 aa20.67■□□□□ 0.9
PUDP-206ENST00000540122 CC2D1BQ5T0F9 858 aaKnown RBP20.67■□□□□ 0.9
PUDP-206ENST00000540122 TIMELESSQ9UNS1 1208 aa20.67■□□□□ 0.9
PUDP-206ENST00000540122 RRP7AQ9Y3A4 280 aaKnown RBP20.67■□□□□ 0.9
PUDP-206ENST00000540122 GPR25O00155 361 aa20.66■□□□□ 0.9
PUDP-206ENST00000540122 RPS12P25398 132 aaKnown RBP20.66■□□□□ 0.9
PUDP-206ENST00000540122 KIF4BQ2VIQ3 1234 aa20.66■□□□□ 0.9
PUDP-206ENST00000540122 PARP10Q53GL7 1025 aa20.66■□□□□ 0.9
PUDP-206ENST00000540122 ASTN2O75129 1339 aaPredicted RBP20.66■□□□□ 0.9
PUDP-206ENST00000540122 POLR2AP24928 1970 aaKnown RBP20.66■□□□□ 0.9
PUDP-206ENST00000540122 MYL6BP14649 208 aa20.65■□□□□ 0.9
PUDP-206ENST00000540122 NOM1Q5C9Z4 860 aaKnown RBP20.65■□□□□ 0.9
PUDP-206ENST00000540122 GIGYF2Q6Y7W6 1299 aaKnown RBP20.65■□□□□ 0.9
PUDP-206ENST00000540122 UTP14AQ9BVJ6 771 aaKnown RBP20.65■□□□□ 0.9
PUDP-206ENST00000540122 DBNDD1Q9H9R9 158 aa20.65■□□□□ 0.9
PUDP-206ENST00000540122 MIS18AQ9NYP9 233 aa20.64■□□□□ 0.89
PUDP-206ENST00000540122 FKBP1BP68106 108 aa20.63■□□□□ 0.89
PUDP-206ENST00000540122 GRAPQ13588 217 aa20.63■□□□□ 0.89
PUDP-206ENST00000540122 GRAPLQ8TC17 118 aaPredicted RBP20.63■□□□□ 0.89
PUDP-206ENST00000540122 PAPPA2Q9BXP8 1791 aa20.62■□□□□ 0.89
PUDP-206ENST00000540122 RTL9Q8NET4 1388 aa20.62■□□□□ 0.89
PUDP-206ENST00000540122 POTEFA5A3E0 1075 aa20.62■□□□□ 0.89
PUDP-206ENST00000540122 TAF7Q15545 349 aaPredicted RBP20.62■□□□□ 0.89
PUDP-206ENST00000540122 HTTP42858 3142 aa20.62■□□□□ 0.89
PUDP-206ENST00000540122 WASHC4Q2M389 1173 aa20.61■□□□□ 0.89
PUDP-206ENST00000540122 DDX46Q7L014 1031 aaKnown RBP20.61■□□□□ 0.89
PUDP-206ENST00000540122 KCNQ5Q9NR82 932 aa20.61■□□□□ 0.89
PUDP-206ENST00000540122 PER1O15534 1290 aaPredicted RBP20.6■□□□□ 0.89
PUDP-206ENST00000540122 FKTNO75072 461 aa20.6■□□□□ 0.89
PUDP-206ENST00000540122 MOB2Q70IA6 237 aa20.6■□□□□ 0.89
PUDP-206ENST00000540122 LAMB2P55268 1798 aa20.59■□□□□ 0.89
PUDP-206ENST00000540122 LRRC37AA6NMS7 1700 aa20.59■□□□□ 0.89
PUDP-206ENST00000540122 RIMBP2O15034 1052 aa20.59■□□□□ 0.89
PUDP-206ENST00000540122 HTATSF1O43719 755 aaKnown RBP20.59■□□□□ 0.89
PUDP-206ENST00000540122 ECE2O60344 883 aa20.59■□□□□ 0.89
PUDP-206ENST00000540122 HCLS1P14317 486 aaPredicted RBP20.59■□□□□ 0.89
PUDP-206ENST00000540122 TM4SF4P48230 202 aa20.59■□□□□ 0.89
PUDP-206ENST00000540122 ANGEL2Q5VTE6 544 aaKnown RBP20.59■□□□□ 0.89
PUDP-206ENST00000540122 ANKRD36CQ5JPF3 1778 aa20.59■□□□□ 0.89
PUDP-206ENST00000540122 TMC4Q7Z404 712 aa20.58■□□□□ 0.89
PUDP-206ENST00000540122 DOK7Q18PE1 504 aa20.57■□□□□ 0.88
PUDP-206ENST00000540122 INTS3Q68E01 1043 aaKnown RBP20.57■□□□□ 0.88
PUDP-206ENST00000540122 R3HDMLQ9H3Y0 253 aa20.57■□□□□ 0.88
PUDP-206ENST00000540122 COLQQ9Y215 455 aaPredicted RBP20.57■□□□□ 0.88
PUDP-206ENST00000540122 UBE2Q2LH0YL09 131 aa20.56■□□□□ 0.88
PUDP-206ENST00000540122 SCARF1Q14162 830 aa20.56■□□□□ 0.88
PUDP-206ENST00000540122 CFHR5Q9BXR6 569 aa20.56■□□□□ 0.88
PUDP-206ENST00000540122 POLLQ9UGP5 575 aa20.56■□□□□ 0.88
PUDP-206ENST00000540122 NSFL1CQ9UNZ2 370 aaKnown RBP20.56■□□□□ 0.88
PUDP-206ENST00000540122 BRCA2P51587 3418 aa20.56■□□□□ 0.88
PUDP-206ENST00000540122 VIL1P09327 827 aaKnown RBP20.55■□□□□ 0.88
PUDP-206ENST00000540122 EIF4A1P60842 406 aaKnown RBP20.55■□□□□ 0.88
PUDP-206ENST00000540122 CENPFP49454 3210 aa20.54■□□□□ 0.88
PUDP-206ENST00000540122 C6orf229H3BNL8 230 aa20.54■□□□□ 0.88
PUDP-206ENST00000540122 ZNF280AP59817 542 aaPredicted RBP20.54■□□□□ 0.88
PUDP-206ENST00000540122 MKRN3Q13064 507 aaKnown RBP20.54■□□□□ 0.88
PUDP-206ENST00000540122 CNGB1Q14028 1251 aaPredicted RBP20.54■□□□□ 0.88
PUDP-206ENST00000540122 PNISRQ8TF01 805 aaKnown RBP20.54■□□□□ 0.88
PUDP-206ENST00000540122 KDM3BQ7LBC6 1761 aa20.54■□□□□ 0.88
PUDP-206ENST00000540122 ERBB4Q15303 1308 aa20.53■□□□□ 0.88
PUDP-206ENST00000540122 DDX60Q8IY21 1712 aaKnown RBP20.53■□□□□ 0.88
PUDP-206ENST00000540122 SZT2Q5T011 3432 aa20.53■□□□□ 0.88
PUDP-206ENST00000540122 SREBF2Q12772 1141 aa20.53■□□□□ 0.88
PUDP-206ENST00000540122 LRP10Q7Z4F1 713 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms