RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 NMIQ13287 307 aaPredicted RBP20.71■□□□□ 0.91
RAB40C-205ENST00000539661 TOB2Q14106 344 aaPredicted RBP20.71■□□□□ 0.91
RAB40C-205ENST00000539661 STX1AQ16623 288 aa20.71■□□□□ 0.91
RAB40C-205ENST00000539661 RESTQ13127 1097 aa20.71■□□□□ 0.91
RAB40C-205ENST00000539661 A0A0U1RQG5 324 aaPredicted RBP20.7■□□□□ 0.9
RAB40C-205ENST00000539661 PI4KAP2A4QPH2 592 aa20.7■□□□□ 0.9
RAB40C-205ENST00000539661 KMT5BQ4FZB7 885 aa20.7■□□□□ 0.9
RAB40C-205ENST00000539661 PI4KAP1Q8N8J0 262 aa20.7■□□□□ 0.9
RAB40C-205ENST00000539661 DDX54Q8TDD1 881 aaKnown RBP20.7■□□□□ 0.9
RAB40C-205ENST00000539661 ZNF592Q92610 1267 aa20.7■□□□□ 0.9
RAB40C-205ENST00000539661 ZNF215Q9UL58 517 aaPredicted RBP20.7■□□□□ 0.9
RAB40C-205ENST00000539661 MED1Q15648 1581 aaPredicted RBP20.69■□□□□ 0.9
RAB40C-205ENST00000539661 SKILP12757 684 aa20.69■□□□□ 0.9
RAB40C-205ENST00000539661 FAM227BQ96M60 508 aa20.69■□□□□ 0.9
RAB40C-205ENST00000539661 CEMIPQ8WUJ3 1361 aa20.69■□□□□ 0.9
RAB40C-205ENST00000539661 MED23Q9ULK4 1368 aa20.69■□□□□ 0.9
RAB40C-205ENST00000539661 ALDH1L1O75891 902 aa20.69■□□□□ 0.9
RAB40C-205ENST00000539661 DIP2AQ14689 1571 aa20.69■□□□□ 0.9
RAB40C-205ENST00000539661 KRT32Q14532 448 aa20.68■□□□□ 0.9
RAB40C-205ENST00000539661 KDM3BQ7LBC6 1761 aa20.68■□□□□ 0.9
RAB40C-205ENST00000539661 EIF4A1P60842 406 aaKnown RBP20.68■□□□□ 0.9
RAB40C-205ENST00000539661 AACSQ86V21 672 aa20.68■□□□□ 0.9
RAB40C-205ENST00000539661 GTF3C6Q969F1 213 aa20.68■□□□□ 0.9
RAB40C-205ENST00000539661 PIK3C2AO00443 1686 aa20.67■□□□□ 0.9
RAB40C-205ENST00000539661 ADCY9O60503 1353 aa20.67■□□□□ 0.9
RAB40C-205ENST00000539661 SLU7O95391 586 aaKnown RBP20.67■□□□□ 0.9
RAB40C-205ENST00000539661 GSDMDP57764 484 aa20.67■□□□□ 0.9
RAB40C-205ENST00000539661 CCAR2Q8N163 923 aaKnown RBP20.67■□□□□ 0.9
RAB40C-205ENST00000539661 CHPF2Q9P2E5 772 aa20.67■□□□□ 0.9
RAB40C-205ENST00000539661 CCZ1BP86790 482 aa20.67■□□□□ 0.9
RAB40C-205ENST00000539661 CCZ1P86791 482 aaPredicted RBP20.67■□□□□ 0.9
RAB40C-205ENST00000539661 CCDC69A6NI79 296 aa20.66■□□□□ 0.9
RAB40C-205ENST00000539661 USP27XA6NNY8 438 aa20.66■□□□□ 0.9
RAB40C-205ENST00000539661 EIF2S2P20042 333 aaKnown RBP20.66■□□□□ 0.9
RAB40C-205ENST00000539661 HOXC9P31274 260 aa20.66■□□□□ 0.9
RAB40C-205ENST00000539661 C11orf57Q6ZUT1 292 aaPredicted RBP20.66■□□□□ 0.9
RAB40C-205ENST00000539661 PLEKHG1Q9ULL1 1385 aa20.65■□□□□ 0.9
RAB40C-205ENST00000539661 NGDNQ8NEJ9 315 aaKnown RBP20.65■□□□□ 0.9
RAB40C-205ENST00000539661 ANO10Q9NW15 660 aa20.65■□□□□ 0.9
RAB40C-205ENST00000539661 RGPD8O14715 1765 aaPredicted RBP20.65■□□□□ 0.9
RAB40C-205ENST00000539661 BECN2A8MW95 431 aa20.65■□□□□ 0.9
RAB40C-205ENST00000539661 FBXO38Q6PIJ6 1188 aa20.65■□□□□ 0.9
RAB40C-205ENST00000539661 BRF1Q92994 677 aa20.65■□□□□ 0.9
RAB40C-205ENST00000539661 MYH15Q9Y2K3 1946 aa20.65■□□□□ 0.9
RAB40C-205ENST00000539661 A0A0D9SFI3 127 aa20.64■□□□□ 0.9
RAB40C-205ENST00000539661 H3BQV1 296 aa20.64■□□□□ 0.9
RAB40C-205ENST00000539661 TUBB4AP04350 444 aa20.64■□□□□ 0.9
RAB40C-205ENST00000539661 IFFO2Q5TF58 517 aa20.64■□□□□ 0.9
RAB40C-205ENST00000539661 USPL1Q5W0Q7 1092 aa20.64■□□□□ 0.9
RAB40C-205ENST00000539661 ATL3Q6DD88 541 aa20.64■□□□□ 0.9
RAB40C-205ENST00000539661 IMPACTQ9P2X3 320 aa20.64■□□□□ 0.9
RAB40C-205ENST00000539661 RCOR1Q9UKL0 485 aa20.64■□□□□ 0.9
RAB40C-205ENST00000539661 COL9A3Q14050 684 aaPredicted RBP20.64■□□□□ 0.89
RAB40C-205ENST00000539661 DHX8Q14562 1220 aaKnown RBP20.64■□□□□ 0.89
RAB40C-205ENST00000539661 C9orf78Q9NZ63 289 aaPredicted RBP20.64■□□□□ 0.89
RAB40C-205ENST00000539661 USP54Q70EL1 1684 aa20.64■□□□□ 0.89
RAB40C-205ENST00000539661 C14orf37Q86TY3 774 aa20.63■□□□□ 0.89
RAB40C-205ENST00000539661 ARID5BQ14865 1188 aa20.63■□□□□ 0.89
RAB40C-205ENST00000539661 TCEANC2Q96MN5 208 aa20.63■□□□□ 0.89
RAB40C-205ENST00000539661 LLPHQ9BRT6 129 aaKnown RBP20.63■□□□□ 0.89
RAB40C-205ENST00000539661 FSD1Q9BTV5 496 aa20.63■□□□□ 0.89
RAB40C-205ENST00000539661 OSBPL5Q9H0X9 879 aaPredicted RBP20.63■□□□□ 0.89
RAB40C-205ENST00000539661 STK3Q13188 491 aa20.62■□□□□ 0.89
RAB40C-205ENST00000539661 ELF2Q15723 593 aa20.62■□□□□ 0.89
RAB40C-205ENST00000539661 DHX40Q8IX18 779 aaKnown RBP20.62■□□□□ 0.89
RAB40C-205ENST00000539661 L2HGDHQ9H9P8 463 aa20.62■□□□□ 0.89
RAB40C-205ENST00000539661 KCNJ6P48051 423 aa20.62■□□□□ 0.89
RAB40C-205ENST00000539661 NAA16Q6N069 864 aaPredicted RBP20.62■□□□□ 0.89
RAB40C-205ENST00000539661 LTV1Q96GA3 475 aaPredicted RBP20.62■□□□□ 0.89
RAB40C-205ENST00000539661 NAT10Q9H0A0 1025 aaKnown RBP20.62■□□□□ 0.89
RAB40C-205ENST00000539661 PA2G4Q9UQ80 394 aaKnown RBP20.62■□□□□ 0.89
RAB40C-205ENST00000539661 SLIT1O75093 1534 aa20.62■□□□□ 0.89
RAB40C-205ENST00000539661 BMS1Q14692 1282 aaKnown RBP20.61■□□□□ 0.89
RAB40C-205ENST00000539661 CCDC73Q6ZRK6 1079 aa20.61■□□□□ 0.89
RAB40C-205ENST00000539661 CCAR1Q8IX12 1150 aaKnown RBP20.61■□□□□ 0.89
RAB40C-205ENST00000539661 CEP57L1Q8IYX8 460 aa20.61■□□□□ 0.89
RAB40C-205ENST00000539661 USP16Q9Y5T5 823 aa20.61■□□□□ 0.89
RAB40C-205ENST00000539661 JAK2O60674 1132 aa20.61■□□□□ 0.89
RAB40C-205ENST00000539661 G3BP1Q13283 466 aaKnown RBP eCLIP20.61■□□□□ 0.89
RAB40C-205ENST00000539661 SMARCC2Q8TAQ2 1214 aa20.61■□□□□ 0.89
RAB40C-205ENST00000539661 EAF2Q96CJ1 260 aaPredicted RBP20.61■□□□□ 0.89
RAB40C-205ENST00000539661 DBF4Q9UBU7 674 aaPredicted RBP20.61■□□□□ 0.89
RAB40C-205ENST00000539661 ERBB3P21860 1342 aa20.61■□□□□ 0.89
RAB40C-205ENST00000539661 SASH1O94885 1247 aa20.6■□□□□ 0.89
RAB40C-205ENST00000539661 ADD1P35611 737 aaKnown RBP20.6■□□□□ 0.89
RAB40C-205ENST00000539661 FGD1P98174 961 aa20.6■□□□□ 0.89
RAB40C-205ENST00000539661 THEMISQ8N1K5 641 aaPredicted RBP20.6■□□□□ 0.89
RAB40C-205ENST00000539661 KINO60870 393 aaKnown RBP20.6■□□□□ 0.89
RAB40C-205ENST00000539661 TAF5LO75529 589 aa20.6■□□□□ 0.89
RAB40C-205ENST00000539661 FILIP1Q7Z7B0 1213 aa20.6■□□□□ 0.89
RAB40C-205ENST00000539661 NEK1Q96PY6 1258 aa20.6■□□□□ 0.89
RAB40C-205ENST00000539661 TAF6LQ9Y6J9 622 aa20.6■□□□□ 0.89
RAB40C-205ENST00000539661 H2AFXP16104 143 aaPredicted RBP20.59■□□□□ 0.89
RAB40C-205ENST00000539661 SNW1Q13573 536 aaKnown RBP20.59■□□□□ 0.89
RAB40C-205ENST00000539661 CALCOCO1Q9P1Z2 691 aa20.59■□□□□ 0.89
RAB40C-205ENST00000539661 PSDA5PKW4 1024 aaPredicted RBP20.59■□□□□ 0.89
RAB40C-205ENST00000539661 FAM160A1Q05DH4 1040 aa20.59■□□□□ 0.89
RAB40C-205ENST00000539661 ENGASEQ8NFI3 743 aa20.59■□□□□ 0.89
RAB40C-205ENST00000539661 UTYO14607 1347 aa20.59■□□□□ 0.89
RAB40C-205ENST00000539661 RFX7Q2KHR2 1363 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms