RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 RFX5P48382 616 aaPredicted RBP14.99□□□□□ -0.01
SFSWAP-208ENST00000539506 NAA30Q147X3 362 aaPredicted RBP14.99□□□□□ -0.01
SFSWAP-208ENST00000539506 VPS53Q5VIR6 699 aa14.99□□□□□ -0.01
SFSWAP-208ENST00000539506 TATP17735 454 aaPredicted RBP14.98□□□□□ -0.01
SFSWAP-208ENST00000539506 ANKRD13DQ6ZTN6 518 aa14.98□□□□□ -0.01
SFSWAP-208ENST00000539506 CKAP2LQ8IYA6 745 aa14.98□□□□□ -0.01
SFSWAP-208ENST00000539506 MAP7D2Q96T17 732 aa14.98□□□□□ -0.01
SFSWAP-208ENST00000539506 TPCN1Q9ULQ1 816 aa14.98□□□□□ -0.01
SFSWAP-208ENST00000539506 U2AF2P26368 475 aaKnown RBP eCLIP14.98□□□□□ -0.01
SFSWAP-208ENST00000539506 SNRKQ9NRH2 765 aa14.98□□□□□ -0.01
SFSWAP-208ENST00000539506 KIF1AQ12756 1690 aa14.98□□□□□ -0.01
SFSWAP-208ENST00000539506 COL15A1P39059 1388 aa14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 ATP5J2-PTCD1G3V325 749 aa14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 SLC27A2O14975 620 aa14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 PTCD1O75127 700 aaKnown RBP14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 GJB2P29033 226 aa14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 IFNL2Q8IZJ0 200 aa14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 TMEM87AQ8NBN3 555 aa14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 BCL2L12Q9HB09 334 aa14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 PPFIA3O75145 1194 aa14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 MCM5P33992 734 aa14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 PTPN12Q05209 780 aaKnown RBP14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 PIBF1Q8WXW3 757 aa14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 CCDC94Q9BW85 323 aaPredicted RBP14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 TM6SF1Q9BZW5 370 aa14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 SMC3Q9UQE7 1217 aa14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 TMEM94Q12767 1356 aa14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 F13A1P00488 732 aa14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 DBNLQ9UJU6 430 aaKnown RBP14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 HDAC5Q9UQL6 1122 aa14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 CYP46A1Q9Y6A2 500 aa14.97□□□□□ -0.01
SFSWAP-208ENST00000539506 MRC1P22897 1456 aa14.96□□□□□ -0.01
SFSWAP-208ENST00000539506 CCDC183Q5T5S1 534 aa14.96□□□□□ -0.01
SFSWAP-208ENST00000539506 TFIP11Q9UBB9 837 aaKnown RBP14.96□□□□□ -0.01
SFSWAP-208ENST00000539506 MTMR6Q9Y217 621 aa14.96□□□□□ -0.01
SFSWAP-208ENST00000539506 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.96□□□□□ -0.01
SFSWAP-208ENST00000539506 SNRPA1P09661 255 aaKnown RBP14.96□□□□□ -0.02
SFSWAP-208ENST00000539506 CSB-PGBD3P0DP91 1061 aa14.96□□□□□ -0.02
SFSWAP-208ENST00000539506 NEXNQ0ZGT2 675 aa14.96□□□□□ -0.02
SFSWAP-208ENST00000539506 TFCP2Q12800 502 aa14.96□□□□□ -0.02
SFSWAP-208ENST00000539506 LRMPQ12912 555 aa14.96□□□□□ -0.02
SFSWAP-208ENST00000539506 KCNF1Q9H3M0 494 aa14.96□□□□□ -0.02
SFSWAP-208ENST00000539506 RIOK3O14730 519 aaKnown RBP14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 UBE3BQ7Z3V4 1068 aa14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 DRC7Q8IY82 874 aa14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 FSD1Q9BTV5 496 aa14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 NRBP1Q9UHY1 535 aa14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 KIF3AQ9Y496 699 aa14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 MED23Q9ULK4 1368 aa14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 KDM4AO75164 1064 aa14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 FOSBP53539 338 aa14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 LUZP1Q86V48 1076 aa14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 STRCP1A6NGW2 1772 aa14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 PHF14O94880 888 aa14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 PDIA4P13667 645 aaKnown RBP14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 PTGS1P23219 599 aa14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 CASP7P55210 303 aa14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 FBXW7Q969H0 707 aa14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 DCAF5Q96JK2 942 aa14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 COPRSQ9NQ92 184 aa14.95□□□□□ -0.02
SFSWAP-208ENST00000539506 GLI3P10071 1580 aa14.94□□□□□ -0.02
SFSWAP-208ENST00000539506 A0A087WWV3 80 aa14.94□□□□□ -0.02
SFSWAP-208ENST00000539506 ATF3P18847 181 aa14.94□□□□□ -0.02
SFSWAP-208ENST00000539506 STK3Q13188 491 aa14.94□□□□□ -0.02
SFSWAP-208ENST00000539506 RABL6Q3YEC7 729 aaPredicted RBP14.93□□□□□ -0.02
SFSWAP-208ENST00000539506 TNNI3KQ59H18 835 aa14.93□□□□□ -0.02
SFSWAP-208ENST00000539506 ZNF592Q92610 1267 aa14.93□□□□□ -0.02
SFSWAP-208ENST00000539506 C16orf45Q96MC5 204 aaPredicted RBP14.93□□□□□ -0.02
SFSWAP-208ENST00000539506 FPGT-TNNI3KV9GXZ4 949 aa14.93□□□□□ -0.02
SFSWAP-208ENST00000539506 NBPF26B4DH59 902 aa14.93□□□□□ -0.02
SFSWAP-208ENST00000539506 ZKSCAN1P17029 563 aaPredicted RBP14.93□□□□□ -0.02
SFSWAP-208ENST00000539506 ZSCAN20P17040 1043 aaPredicted RBP14.93□□□□□ -0.02
SFSWAP-208ENST00000539506 NBPF14Q5TI25 921 aa14.93□□□□□ -0.02
SFSWAP-208ENST00000539506 NBPF10Q6P3W6 841 aaKnown RBP14.93□□□□□ -0.02
SFSWAP-208ENST00000539506 TTC5Q8N0Z6 440 aa14.93□□□□□ -0.02
SFSWAP-208ENST00000539506 NBPF15Q8N660 670 aa14.93□□□□□ -0.02
SFSWAP-208ENST00000539506 TAF5LO75529 589 aa14.92□□□□□ -0.02
SFSWAP-208ENST00000539506 ADRA2BP18089 450 aa14.92□□□□□ -0.02
SFSWAP-208ENST00000539506 KCNJ4P48050 445 aa14.92□□□□□ -0.02
SFSWAP-208ENST00000539506 TOB2Q14106 344 aaPredicted RBP14.92□□□□□ -0.02
SFSWAP-208ENST00000539506 FMNL2Q96PY5 1086 aa14.92□□□□□ -0.02
SFSWAP-208ENST00000539506 SEC62Q99442 399 aaKnown RBP14.92□□□□□ -0.02
SFSWAP-208ENST00000539506 JCADQ9P266 1359 aa14.92□□□□□ -0.02
SFSWAP-208ENST00000539506 CCDC129Q6ZRS4 1044 aa14.92□□□□□ -0.02
SFSWAP-208ENST00000539506 DBNDD2Q9BQY9 259 aa14.92□□□□□ -0.02
SFSWAP-208ENST00000539506 A0A087WZG4 1122 aa14.92□□□□□ -0.02
SFSWAP-208ENST00000539506 CEBPZQ03701 1054 aaKnown RBP14.92□□□□□ -0.02
SFSWAP-208ENST00000539506 SLFNL1Q499Z3 407 aa14.92□□□□□ -0.02
SFSWAP-208ENST00000539506 SH2B1Q9NRF2 756 aaPredicted RBP14.92□□□□□ -0.02
SFSWAP-208ENST00000539506 HIP1O00291 1037 aa14.91□□□□□ -0.02
SFSWAP-208ENST00000539506 LIG1P18858 919 aa14.91□□□□□ -0.02
SFSWAP-208ENST00000539506 SMAP1Q8IYB5 467 aaPredicted RBP14.91□□□□□ -0.02
SFSWAP-208ENST00000539506 PDCL2Q8N4E4 241 aa14.91□□□□□ -0.02
SFSWAP-208ENST00000539506 ZSCAN31Q96LW9 406 aaPredicted RBP14.91□□□□□ -0.02
SFSWAP-208ENST00000539506 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.91□□□□□ -0.02
SFSWAP-208ENST00000539506 TAOK2Q9UL54 1235 aa14.91□□□□□ -0.02
SFSWAP-208ENST00000539506 V9GYY5 206 aaPredicted RBP14.91□□□□□ -0.02
SFSWAP-208ENST00000539506 NPHP1O15259 732 aa14.91□□□□□ -0.02
SFSWAP-208ENST00000539506 ATP5JP18859 108 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms