RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 FAM212AQ96EL1 285 aa6.78□□□□□ -1.32
RAB3GAP1-207ENST00000539493 KCNF1Q9H3M0 494 aa6.78□□□□□ -1.32
RAB3GAP1-207ENST00000539493 LRRFIP2Q9Y608 721 aaKnown RBP6.78□□□□□ -1.32
RAB3GAP1-207ENST00000539493 NWD1Q149M9 1564 aa6.77□□□□□ -1.32
RAB3GAP1-207ENST00000539493 K7ELQ4 463 aaPredicted RBP6.77□□□□□ -1.32
RAB3GAP1-207ENST00000539493 CHL1O00533 1208 aa6.77□□□□□ -1.32
RAB3GAP1-207ENST00000539493 FOXO3O43524 673 aa6.77□□□□□ -1.32
RAB3GAP1-207ENST00000539493 SMC2O95347 1197 aa6.77□□□□□ -1.32
RAB3GAP1-207ENST00000539493 SLC5A9Q2M3M2 681 aa6.77□□□□□ -1.32
RAB3GAP1-207ENST00000539493 ESCO1Q5FWF5 840 aa6.77□□□□□ -1.32
RAB3GAP1-207ENST00000539493 MSL3Q8N5Y2 521 aaKnown RBP6.77□□□□□ -1.32
RAB3GAP1-207ENST00000539493 CRB1P82279 1406 aa6.77□□□□□ -1.33
RAB3GAP1-207ENST00000539493 FMNL3Q8IVF7 1028 aa6.77□□□□□ -1.33
RAB3GAP1-207ENST00000539493 SLX1AQ9BQ83 275 aa6.77□□□□□ -1.33
RAB3GAP1-207ENST00000539493 ST7Q9NRC1 585 aa6.77□□□□□ -1.33
RAB3GAP1-207ENST00000539493 KCND1Q9NSA2 647 aa6.77□□□□□ -1.33
RAB3GAP1-207ENST00000539493 PDZRN3Q9UPQ7 1066 aa6.77□□□□□ -1.33
RAB3GAP1-207ENST00000539493 TPM1P09493 284 aa6.77□□□□□ -1.33
RAB3GAP1-207ENST00000539493 EFCAB13Q8IY85 973 aa6.77□□□□□ -1.33
RAB3GAP1-207ENST00000539493 NEK11Q8NG66 645 aa6.77□□□□□ -1.33
RAB3GAP1-207ENST00000539493 MMTAG2Q9BU76 263 aaKnown RBP6.77□□□□□ -1.33
RAB3GAP1-207ENST00000539493 ABCC4O15439 1325 aa6.77□□□□□ -1.33
RAB3GAP1-207ENST00000539493 RTL1A6NKG5 1358 aa6.77□□□□□ -1.33
RAB3GAP1-207ENST00000539493 TMCO5BA8MYB1 307 aa6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 KIF2AO00139 706 aaPredicted RBP6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 RWDD2BP57060 319 aa6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 KRT24Q2M2I5 525 aa6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 REXO1L1PQ8IX06 675 aa6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 SDR16C5Q8N3Y7 309 aa6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 CCDC26Q8TAB7 109 aa6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 UTP14AQ9BVJ6 771 aaKnown RBP6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 TTC12Q9H892 705 aaPredicted RBP6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 CWC22Q9HCG8 908 aaKnown RBP6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 KIAA0232Q92628 1395 aa6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 NFAT5O94916 1531 aa6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 ZBTB7BO15156 539 aaPredicted RBP6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 ACTN2P35609 894 aa6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 CCT2P78371 535 aaKnown RBP6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 PSME1Q06323 249 aa6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 CCDC112Q8NEF3 446 aa6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 PYCARDQ9ULZ3 195 aa6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 TBC1D2BQ9UPU7 963 aa6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 NUB1Q9Y5A7 615 aa6.76□□□□□ -1.33
RAB3GAP1-207ENST00000539493 EIF3CLB5ME19 914 aaKnown RBP6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 HTATSF1O43719 755 aaKnown RBP6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 PPFIA2O75334 1257 aa6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 PNMA6AP0CW24 399 aaPredicted RBP6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 TBC1D8BQ0IIM8 1120 aa6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 CCDC186Q7Z3E2 898 aa6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 GAS2L2Q8NHY3 880 aa6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 SMARCE1Q969G3 411 aa6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 ORAI2Q96SN7 254 aa6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 EIF3CQ99613 913 aaKnown RBP6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 SH3GL3Q99963 347 aa6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 SUDS3Q9H7L9 328 aaPredicted RBP6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 DDR1Q08345 913 aa6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 PDIA5Q14554 519 aa6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 CRYMQ14894 314 aa6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 TEX11Q8IYF3 940 aa6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 C17orf53Q8N3J3 647 aaPredicted RBP6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 RTF1Q92541 710 aaKnown RBP6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 LTN1O94822 1766 aa6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 ELP1O95163 1332 aa6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 SYCE3A1L190 88 aa6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 KINO60870 393 aaKnown RBP6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 RTN2O75298 545 aa6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 USP8P40818 1118 aa6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 E2F4Q16254 413 aa6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 CDC37Q16543 378 aaPredicted RBP6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 LEKR1Q6ZMV7 388 aa6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 GNL3LQ9NVN8 582 aaKnown RBP6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 MKRN1Q9UHC7 482 aaKnown RBP6.75□□□□□ -1.33
RAB3GAP1-207ENST00000539493 LRRC37A3O60309 1634 aa6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 ADCY5O95622 1261 aa6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 RBM5P52756 815 aaKnown RBP eCLIP6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 MRPL12P52815 198 aaKnown RBP6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 PDCD2Q16342 344 aaPredicted RBP6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 WWC2Q6AWC2 1192 aa6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 IP6K1Q92551 441 aa6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 LTV1Q96GA3 475 aaPredicted RBP6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 AK7Q96M32 723 aa6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 API5Q9BZZ5 524 aaKnown RBP6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 KDM4CQ9H3R0 1056 aa6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 MIS18AQ9NYP9 233 aa6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 A0A087WUV0 522 aaPredicted RBP6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 KDM4AO75164 1064 aa6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 GCFC2P16383 781 aaKnown RBP6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 MYBPC2Q14324 1141 aa6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 AMOTQ4VCS5 1084 aa6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 DRAXINQ8NBI3 349 aaPredicted RBP6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 KCNH5Q8NCM2 988 aa6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 LARP6Q9BRS8 491 aaKnown RBP6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 MCM8Q9UJA3 840 aa6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 RGS12O14924 1447 aa6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 SOS1Q07889 1333 aaPredicted RBP6.74□□□□□ -1.33
RAB3GAP1-207ENST00000539493 TNNT1P13805 278 aa6.73□□□□□ -1.33
RAB3GAP1-207ENST00000539493 AP1ARQ63HQ0 302 aa6.73□□□□□ -1.33
RAB3GAP1-207ENST00000539493 MCTP1Q6DN14 999 aa6.73□□□□□ -1.33
RAB3GAP1-207ENST00000539493 DDX46Q7L014 1031 aaKnown RBP6.73□□□□□ -1.33
RAB3GAP1-207ENST00000539493 ZNF483Q8TF39 744 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms