RNA–Protein interactions for RNA: ENST00000539455.5

CELF1-220, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 5

Gene CELF1, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-220ENST00000539455 RTKN2Q8IZC4 609 aa7.18□□□□□ -1.26
CELF1-220ENST00000539455 C2orf69Q8N8R5 385 aa7.18□□□□□ -1.26
CELF1-220ENST00000539455 TMEM106CQ9BVX2 250 aa7.18□□□□□ -1.26
CELF1-220ENST00000539455 AKAP11Q9UKA4 1901 aa7.18□□□□□ -1.26
CELF1-220ENST00000539455 COL15A1P39059 1388 aa7.18□□□□□ -1.26
CELF1-220ENST00000539455 C19orf67A6NJJ6 358 aa7.17□□□□□ -1.26
CELF1-220ENST00000539455 MYCP01106 439 aaPredicted RBP7.17□□□□□ -1.26
CELF1-220ENST00000539455 MTHFSP49914 203 aa7.17□□□□□ -1.26
CELF1-220ENST00000539455 RRS1Q15050 365 aaKnown RBP7.17□□□□□ -1.26
CELF1-220ENST00000539455 IFNL2Q8IZJ0 200 aa7.17□□□□□ -1.26
CELF1-220ENST00000539455 TRPM4Q8TD43 1214 aa7.17□□□□□ -1.26
CELF1-220ENST00000539455 ZC3H15Q8WU90 426 aaKnown RBP7.17□□□□□ -1.26
CELF1-220ENST00000539455 DPF3Q92784 378 aa7.17□□□□□ -1.26
CELF1-220ENST00000539455 YTHDC1Q96MU7 727 aaKnown RBP7.17□□□□□ -1.26
CELF1-220ENST00000539455 RBBP6Q7Z6E9 1792 aaKnown RBP7.17□□□□□ -1.26
CELF1-220ENST00000539455 COL3A1P02461 1466 aaPredicted RBP7.17□□□□□ -1.26
CELF1-220ENST00000539455 TBC1D9BQ66K14 1250 aa7.16□□□□□ -1.26
CELF1-220ENST00000539455 ZNF467Q7Z7K2 595 aaPredicted RBP7.16□□□□□ -1.26
CELF1-220ENST00000539455 SLC51AQ86UW1 340 aa7.16□□□□□ -1.26
CELF1-220ENST00000539455 FAM9BQ8IZU0 186 aa7.16□□□□□ -1.26
CELF1-220ENST00000539455 PNISRQ8TF01 805 aaKnown RBP7.16□□□□□ -1.26
CELF1-220ENST00000539455 POLKQ9UBT6 870 aa7.16□□□□□ -1.26
CELF1-220ENST00000539455 PTPN22Q9Y2R2 807 aa7.16□□□□□ -1.26
CELF1-220ENST00000539455 EMILIN1Q9Y6C2 1016 aa7.16□□□□□ -1.26
CELF1-220ENST00000539455 SYNGAP1Q96PV0 1343 aa7.16□□□□□ -1.26
CELF1-220ENST00000539455 SNED1Q8TER0 1413 aa7.16□□□□□ -1.26
CELF1-220ENST00000539455 EYSQ5T1H1 3165 aa7.16□□□□□ -1.26
CELF1-220ENST00000539455 WTIPA6NIX2 430 aaPredicted RBP7.15□□□□□ -1.26
CELF1-220ENST00000539455 ERVV-2B6SEH9 535 aa7.15□□□□□ -1.26
CELF1-220ENST00000539455 PPM1GO15355 546 aaPredicted RBP7.15□□□□□ -1.26
CELF1-220ENST00000539455 MAP3K12Q12852 859 aa7.15□□□□□ -1.26
CELF1-220ENST00000539455 HSP90AB2PQ58FF8 381 aa7.15□□□□□ -1.26
CELF1-220ENST00000539455 ZNF333Q96JL9 665 aa7.15□□□□□ -1.26
CELF1-220ENST00000539455 PSMD1Q99460 953 aa7.15□□□□□ -1.26
CELF1-220ENST00000539455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.15□□□□□ -1.26
CELF1-220ENST00000539455 NCAPD2Q15021 1401 aa7.15□□□□□ -1.27
CELF1-220ENST00000539455 MUC3AQ02505 3323 aa7.15□□□□□ -1.27
CELF1-220ENST00000539455 SHTN1A0MZ66 631 aa7.14□□□□□ -1.27
CELF1-220ENST00000539455 GMPSP49915 693 aaPredicted RBP7.14□□□□□ -1.27
CELF1-220ENST00000539455 DNAJC10Q8IXB1 793 aa7.14□□□□□ -1.27
CELF1-220ENST00000539455 CNBD1Q8NA66 436 aa7.14□□□□□ -1.27
CELF1-220ENST00000539455 CFHR5Q9BXR6 569 aa7.14□□□□□ -1.27
CELF1-220ENST00000539455 ZBTB1Q9Y2K1 713 aa7.14□□□□□ -1.27
CELF1-220ENST00000539455 TJP1Q07157 1748 aa7.13□□□□□ -1.27
CELF1-220ENST00000539455 LAMA2P24043 3122 aaKnown RBP7.13□□□□□ -1.27
CELF1-220ENST00000539455 MRC1P22897 1456 aa7.13□□□□□ -1.27
CELF1-220ENST00000539455 RPTORQ8N122 1335 aa7.13□□□□□ -1.27
CELF1-220ENST00000539455 ADM5C9JUS6 153 aa7.13□□□□□ -1.27
CELF1-220ENST00000539455 ZBTB7BO15156 539 aaPredicted RBP7.13□□□□□ -1.27
CELF1-220ENST00000539455 NPR1P16066 1061 aa7.13□□□□□ -1.27
CELF1-220ENST00000539455 ST5P78524 1137 aa7.13□□□□□ -1.27
CELF1-220ENST00000539455 SLC4A8Q2Y0W8 1093 aa7.13□□□□□ -1.27
CELF1-220ENST00000539455 KRT26Q7Z3Y9 468 aa7.13□□□□□ -1.27
CELF1-220ENST00000539455 HS6ST3Q8IZP7 471 aa7.13□□□□□ -1.27
CELF1-220ENST00000539455 LARGE2Q8N3Y3 721 aa7.13□□□□□ -1.27
CELF1-220ENST00000539455 ZNF579Q8NAF0 562 aaKnown RBP7.13□□□□□ -1.27
CELF1-220ENST00000539455 CFAP53Q96M91 514 aa7.13□□□□□ -1.27
CELF1-220ENST00000539455 ARFGEF2Q9Y6D5 1785 aa7.13□□□□□ -1.27
CELF1-220ENST00000539455 TNFRSF10AO00220 468 aa7.12□□□□□ -1.27
CELF1-220ENST00000539455 CYP19A1P11511 503 aaPredicted RBP7.12□□□□□ -1.27
CELF1-220ENST00000539455 TM4SF4P48230 202 aa7.12□□□□□ -1.27
CELF1-220ENST00000539455 CABP4P57796 275 aa7.12□□□□□ -1.27
CELF1-220ENST00000539455 WDR43Q15061 677 aaKnown RBP eCLIP7.12□□□□□ -1.27
CELF1-220ENST00000539455 BBXQ8WY36 941 aaPredicted RBP7.12□□□□□ -1.27
CELF1-220ENST00000539455 SYMPKQ92797 1274 aaKnown RBP7.12□□□□□ -1.27
CELF1-220ENST00000539455 KIF12Q96FN5 646 aa7.12□□□□□ -1.27
CELF1-220ENST00000539455 STAP2Q9UGK3 403 aa7.12□□□□□ -1.27
CELF1-220ENST00000539455 ADAMTS8Q9UP79 889 aa7.12□□□□□ -1.27
CELF1-220ENST00000539455 PRUNE2Q8WUY3 3088 aa7.12□□□□□ -1.27
CELF1-220ENST00000539455 FLT4P35916 1363 aa7.11□□□□□ -1.27
CELF1-220ENST00000539455 NPHP1O15259 732 aa7.11□□□□□ -1.27
CELF1-220ENST00000539455 DIAPH1O60610 1272 aaKnown RBP7.11□□□□□ -1.27
CELF1-220ENST00000539455 CAP1Q01518 475 aa7.11□□□□□ -1.27
CELF1-220ENST00000539455 CXCL9Q07325 125 aa7.11□□□□□ -1.27
CELF1-220ENST00000539455 MKRN3Q13064 507 aaKnown RBP7.11□□□□□ -1.27
CELF1-220ENST00000539455 ALYREFQ86V81 257 aaKnown RBP7.11□□□□□ -1.27
CELF1-220ENST00000539455 NIM1KQ8IY84 436 aa7.11□□□□□ -1.27
CELF1-220ENST00000539455 GUCD1Q96NT3 240 aa7.11□□□□□ -1.27
CELF1-220ENST00000539455 PCDHB13Q9Y5F0 798 aa7.11□□□□□ -1.27
CELF1-220ENST00000539455 NR2E3Q9Y5X4 410 aa7.11□□□□□ -1.27
CELF1-220ENST00000539455 ZNF609O15014 1411 aa7.1□□□□□ -1.27
CELF1-220ENST00000539455 KIF24Q5T7B8 1368 aa7.1□□□□□ -1.27
CELF1-220ENST00000539455 CDHR2Q9BYE9 1310 aa7.1□□□□□ -1.27
CELF1-220ENST00000539455 KLRG2A4D1S0 409 aaPredicted RBP7.1□□□□□ -1.27
CELF1-220ENST00000539455 HAX1O00165 279 aa7.1□□□□□ -1.27
CELF1-220ENST00000539455 U2SURPO15042 1029 aaKnown RBP7.1□□□□□ -1.27
CELF1-220ENST00000539455 MAP3K13O43283 966 aa7.1□□□□□ -1.27
CELF1-220ENST00000539455 IL13P35225 146 aa7.1□□□□□ -1.27
CELF1-220ENST00000539455 HNRNPUQ00839 825 aaKnown RBP eCLIP7.1□□□□□ -1.27
CELF1-220ENST00000539455 EIF4A2Q14240 407 aaKnown RBP7.1□□□□□ -1.27
CELF1-220ENST00000539455 SHISA4Q96DD7 197 aa7.1□□□□□ -1.27
CELF1-220ENST00000539455 FAM161BQ96MY7 647 aa7.1□□□□□ -1.27
CELF1-220ENST00000539455 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.1□□□□□ -1.27
CELF1-220ENST00000539455 PPEF1O14829 653 aaPredicted RBP7.09□□□□□ -1.27
CELF1-220ENST00000539455 U2AF1L5P0DN76 240 aaPredicted RBP7.09□□□□□ -1.27
CELF1-220ENST00000539455 U2AF1Q01081 240 aaKnown RBP eCLIP7.09□□□□□ -1.278e-7■■■■□ 21.7
CELF1-220ENST00000539455 PDAP1Q13442 181 aaKnown RBP7.09□□□□□ -1.27
CELF1-220ENST00000539455 LRIT3Q3SXY7 679 aa7.09□□□□□ -1.27
CELF1-220ENST00000539455 CCDC146Q8IYE0 955 aa7.09□□□□□ -1.27
CELF1-220ENST00000539455 CD99L2Q8TCZ2 262 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms