RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 MMP10P09238 476 aa14.2□□□□□ -0.14
FAM60A-206ENST00000539409 EXOC6BQ9Y2D4 811 aa14.2□□□□□ -0.14
FAM60A-206ENST00000539409 C3orf67Q6ZVT6 689 aa14.19□□□□□ -0.14
FAM60A-206ENST00000539409 CCDC24Q8N4L8 307 aa14.19□□□□□ -0.14
FAM60A-206ENST00000539409 CCDC85AQ96PX6 553 aaPredicted RBP14.19□□□□□ -0.14
FAM60A-206ENST00000539409 GREM2Q9H772 168 aa14.19□□□□□ -0.14
FAM60A-206ENST00000539409 PA2G4Q9UQ80 394 aaKnown RBP14.19□□□□□ -0.14
FAM60A-206ENST00000539409 KLHDC4Q8TBB5 520 aa14.19□□□□□ -0.14
FAM60A-206ENST00000539409 LRP5O75197 1615 aa14.19□□□□□ -0.14
FAM60A-206ENST00000539409 NPHP1O15259 732 aa14.18□□□□□ -0.14
FAM60A-206ENST00000539409 PTPN12Q05209 780 aaKnown RBP14.18□□□□□ -0.14
FAM60A-206ENST00000539409 COPRSQ9NQ92 184 aa14.18□□□□□ -0.14
FAM60A-206ENST00000539409 NOP58Q9Y2X3 529 aaKnown RBP14.18□□□□□ -0.14
FAM60A-206ENST00000539409 RTL9Q8NET4 1388 aa14.18□□□□□ -0.14
FAM60A-206ENST00000539409 SURF6O75683 361 aaKnown RBP14.18□□□□□ -0.14
FAM60A-206ENST00000539409 SLC16A10Q8TF71 515 aa14.18□□□□□ -0.14
FAM60A-206ENST00000539409 ANKRD31Q8N7Z5 1873 aa14.17□□□□□ -0.14
FAM60A-206ENST00000539409 NUCB1Q02818 461 aa14.17□□□□□ -0.14
FAM60A-206ENST00000539409 R3HDM1Q15032 1099 aaKnown RBP14.17□□□□□ -0.14
FAM60A-206ENST00000539409 PDZRN3Q9UPQ7 1066 aa14.17□□□□□ -0.14
FAM60A-206ENST00000539409 COL4A1P02462 1669 aa14.17□□□□□ -0.14
FAM60A-206ENST00000539409 ITGA6P23229 1130 aa14.17□□□□□ -0.14
FAM60A-206ENST00000539409 ST5P78524 1137 aa14.17□□□□□ -0.14
FAM60A-206ENST00000539409 IFIT5Q13325 482 aaKnown RBP14.17□□□□□ -0.14
FAM60A-206ENST00000539409 SF3B3Q15393 1217 aaKnown RBP14.17□□□□□ -0.14
FAM60A-206ENST00000539409 CCDC57Q2TAC2 916 aa14.17□□□□□ -0.14
FAM60A-206ENST00000539409 CCDC152Q4G0S7 254 aa14.17□□□□□ -0.14
FAM60A-206ENST00000539409 SKAP1Q86WV1 359 aa14.17□□□□□ -0.14
FAM60A-206ENST00000539409 PARP3Q9Y6F1 533 aa14.17□□□□□ -0.14
FAM60A-206ENST00000539409 APBB1O00213 710 aa14.16□□□□□ -0.14
FAM60A-206ENST00000539409 SIL1Q9H173 461 aa14.16□□□□□ -0.14
FAM60A-206ENST00000539409 ZNF594Q96JF6 807 aaPredicted RBP14.16□□□□□ -0.14
FAM60A-206ENST00000539409 NLRP3Q96P20 1036 aa14.16□□□□□ -0.14
FAM60A-206ENST00000539409 HSP90AB4PQ58FF6 505 aa14.15□□□□□ -0.14
FAM60A-206ENST00000539409 ANKRD45Q5TZF3 282 aa14.15□□□□□ -0.14
FAM60A-206ENST00000539409 ANKRD18BA2A2Z9 1011 aa14.15□□□□□ -0.14
FAM60A-206ENST00000539409 RAB11FIP3O75154 756 aa14.15□□□□□ -0.14
FAM60A-206ENST00000539409 CHD1LQ86WJ1 897 aa14.15□□□□□ -0.14
FAM60A-206ENST00000539409 SPEF2Q9C093 1822 aa14.15□□□□□ -0.14
FAM60A-206ENST00000539409 LRRCC1Q9C099 1032 aa14.14□□□□□ -0.15
FAM60A-206ENST00000539409 LNPKQ9C0E8 428 aa14.14□□□□□ -0.15
FAM60A-206ENST00000539409 SEC31BQ9NQW1 1179 aa14.14□□□□□ -0.15
FAM60A-206ENST00000539409 TAF1P21675 1872 aa14.14□□□□□ -0.15
FAM60A-206ENST00000539409 SMARCA5O60264 1052 aaPredicted RBP14.14□□□□□ -0.15
FAM60A-206ENST00000539409 OS9Q13438 667 aaPredicted RBP14.14□□□□□ -0.15
FAM60A-206ENST00000539409 COL11A2P13942 1736 aaPredicted RBP14.13□□□□□ -0.15
FAM60A-206ENST00000539409 G3BP1Q13283 466 aaKnown RBP eCLIP14.13□□□□□ -0.15
FAM60A-206ENST00000539409 CRY2Q49AN0 593 aa14.13□□□□□ -0.15
FAM60A-206ENST00000539409 ATG9AQ7Z3C6 839 aa14.13□□□□□ -0.15
FAM60A-206ENST00000539409 RHPN1Q8TCX5 695 aa14.13□□□□□ -0.15
FAM60A-206ENST00000539409 PSDA5PKW4 1024 aaPredicted RBP14.13□□□□□ -0.15
FAM60A-206ENST00000539409 CIAO1O76071 339 aa14.13□□□□□ -0.15
FAM60A-206ENST00000539409 SASH1O94885 1247 aa14.13□□□□□ -0.15
FAM60A-206ENST00000539409 ZBTB7AO95365 584 aa14.13□□□□□ -0.15
FAM60A-206ENST00000539409 TAF7LQ5H9L4 462 aa14.13□□□□□ -0.15
FAM60A-206ENST00000539409 ERC1Q8IUD2 1116 aa14.13□□□□□ -0.15
FAM60A-206ENST00000539409 KIF1BPQ96EK5 621 aa14.13□□□□□ -0.15
FAM60A-206ENST00000539409 KLRG2A4D1S0 409 aaPredicted RBP14.12□□□□□ -0.15
FAM60A-206ENST00000539409 EYA2O00167 538 aa14.12□□□□□ -0.15
FAM60A-206ENST00000539409 PDE4AP27815 886 aa14.12□□□□□ -0.15
FAM60A-206ENST00000539409 LRRC24Q50LG9 513 aa14.12□□□□□ -0.15
FAM60A-206ENST00000539409 BRIP1Q9BX63 1249 aa14.12□□□□□ -0.15
FAM60A-206ENST00000539409 PUS3Q9BZE2 481 aaKnown RBP14.12□□□□□ -0.15
FAM60A-206ENST00000539409 MTFR1LQ9H019 292 aa14.12□□□□□ -0.15
FAM60A-206ENST00000539409 FBXO3Q9UK99 471 aa14.12□□□□□ -0.15
FAM60A-206ENST00000539409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.12□□□□□ -0.15
FAM60A-206ENST00000539409 IL1RAPL2Q9NP60 686 aa14.11□□□□□ -0.15
FAM60A-206ENST00000539409 C10orf71Q711Q0 1435 aa14.11□□□□□ -0.15
FAM60A-206ENST00000539409 IL15P40933 162 aaPredicted RBP14.11□□□□□ -0.15
FAM60A-206ENST00000539409 CDC5LQ99459 802 aaKnown RBP14.11□□□□□ -0.15
FAM60A-206ENST00000539409 LDHAL6AQ6ZMR3 332 aa14.1□□□□□ -0.15
FAM60A-206ENST00000539409 ZBTB47Q9UFB7 747 aaPredicted RBP14.1□□□□□ -0.15
FAM60A-206ENST00000539409 RIPOR2Q9Y4F9 1068 aa14.1□□□□□ -0.15
FAM60A-206ENST00000539409 A0A1B0GUL6 1792 aa14.1□□□□□ -0.15
FAM60A-206ENST00000539409 CELF1Q92879 486 aaKnown RBP14.1□□□□□ -0.15
FAM60A-206ENST00000539409 RGS3P49796 1198 aa14.09□□□□□ -0.15
FAM60A-206ENST00000539409 TFCP2Q12800 502 aa14.09□□□□□ -0.15
FAM60A-206ENST00000539409 DDX46Q7L014 1031 aaKnown RBP14.09□□□□□ -0.15
FAM60A-206ENST00000539409 C16orf71Q8IYS4 520 aaPredicted RBP14.09□□□□□ -0.15
FAM60A-206ENST00000539409 RPGRQ92834 1020 aaKnown RBP14.09□□□□□ -0.15
FAM60A-206ENST00000539409 BCL11AQ9H165 835 aa14.09□□□□□ -0.15
FAM60A-206ENST00000539409 CNNM1Q9NRU3 951 aa14.09□□□□□ -0.15
FAM60A-206ENST00000539409 ATF5Q9Y2D1 282 aaPredicted RBP14.09□□□□□ -0.15
FAM60A-206ENST00000539409 KIF13BQ9NQT8 1826 aa14.09□□□□□ -0.15
FAM60A-206ENST00000539409 PDE6BP35913 854 aa14.09□□□□□ -0.15
FAM60A-206ENST00000539409 IGHMBP2P38935 993 aaKnown RBP14.09□□□□□ -0.15
FAM60A-206ENST00000539409 ANKRD18AQ8IVF6 992 aa14.09□□□□□ -0.15
FAM60A-206ENST00000539409 OTUD7AQ8TE49 926 aaPredicted RBP14.09□□□□□ -0.15
FAM60A-206ENST00000539409 MPHOSPH8Q99549 860 aa14.09□□□□□ -0.15
FAM60A-206ENST00000539409 HOXA10P31260 410 aaPredicted RBP14.08□□□□□ -0.15
FAM60A-206ENST00000539409 SRGNP10124 158 aa14.08□□□□□ -0.16
FAM60A-206ENST00000539409 SGIP1Q9BQI5 828 aa14.08□□□□□ -0.16
FAM60A-206ENST00000539409 SALL3Q9BXA9 1300 aa14.08□□□□□ -0.16
FAM60A-206ENST00000539409 ZNF609O15014 1411 aa14.07□□□□□ -0.16
FAM60A-206ENST00000539409 RPS8P62241 208 aaKnown RBP14.07□□□□□ -0.16
FAM60A-206ENST00000539409 GRAPQ13588 217 aa14.07□□□□□ -0.16
FAM60A-206ENST00000539409 CLASRPQ8N2M8 674 aaKnown RBP14.07□□□□□ -0.16
FAM60A-206ENST00000539409 VGLL2Q8N8G2 317 aa14.07□□□□□ -0.16
FAM60A-206ENST00000539409 GRAPLQ8TC17 118 aaPredicted RBP14.07□□□□□ -0.16
FAM60A-206ENST00000539409 BSDC1Q9NW68 430 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms