RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 SNED1Q8TER0 1413 aa11.63□□□□□ -0.55
SMAD3-203ENST00000537194 GMPSP49915 693 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-203ENST00000537194 CXCL9Q07325 125 aa11.63□□□□□ -0.55
SMAD3-203ENST00000537194 KIAA2012Q0VF49 1180 aa11.63□□□□□ -0.55
SMAD3-203ENST00000537194 C3orf67Q6ZVT6 689 aa11.63□□□□□ -0.55
SMAD3-203ENST00000537194 ZC3H15Q8WU90 426 aaKnown RBP11.63□□□□□ -0.55
SMAD3-203ENST00000537194 RTFDC1Q9BY42 306 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-203ENST00000537194 G3V3G9 751 aa11.62□□□□□ -0.55
SMAD3-203ENST00000537194 CA12O43570 354 aa11.62□□□□□ -0.55
SMAD3-203ENST00000537194 CELF2O95319 508 aaKnown RBP11.62□□□□□ -0.55
SMAD3-203ENST00000537194 HOXB7P09629 217 aa11.62□□□□□ -0.55
SMAD3-203ENST00000537194 HSPA8P11142 646 aaKnown RBP11.62□□□□□ -0.55
SMAD3-203ENST00000537194 MAP2K2P36507 400 aa11.62□□□□□ -0.55
SMAD3-203ENST00000537194 PDIA6Q15084 440 aa11.62□□□□□ -0.55
SMAD3-203ENST00000537194 PROSER3Q2NL68 480 aa11.62□□□□□ -0.55
SMAD3-203ENST00000537194 DCAF8Q5TAQ9 597 aa11.62□□□□□ -0.55
SMAD3-203ENST00000537194 HDGFL1Q5TGJ6 251 aa11.62□□□□□ -0.55
SMAD3-203ENST00000537194 EYA3Q99504 573 aa11.62□□□□□ -0.55
SMAD3-203ENST00000537194 CHMP4AQ9BY43 222 aa11.62□□□□□ -0.55
SMAD3-203ENST00000537194 TLL2Q9Y6L7 1015 aa11.62□□□□□ -0.55
SMAD3-203ENST00000537194 MYBBP1AQ9BQG0 1328 aaKnown RBP11.61□□□□□ -0.55
SMAD3-203ENST00000537194 RAD17O75943 681 aa11.61□□□□□ -0.55
SMAD3-203ENST00000537194 WASHC4Q2M389 1173 aa11.61□□□□□ -0.55
SMAD3-203ENST00000537194 CYP4F22Q6NT55 531 aa11.61□□□□□ -0.55
SMAD3-203ENST00000537194 ANKRD13DQ6ZTN6 518 aa11.61□□□□□ -0.55
SMAD3-203ENST00000537194 CDC37L1Q7L3B6 337 aa11.61□□□□□ -0.55
SMAD3-203ENST00000537194 PLBD2Q8NHP8 589 aa11.61□□□□□ -0.55
SMAD3-203ENST00000537194 RUNDC1Q96C34 613 aa11.61□□□□□ -0.55
SMAD3-203ENST00000537194 ZNF408Q9H9D4 720 aa11.61□□□□□ -0.55
SMAD3-203ENST00000537194 HYPKQ9NX55 129 aa11.61□□□□□ -0.55
SMAD3-203ENST00000537194 DBF4Q9UBU7 674 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-203ENST00000537194 CNOT7Q9UIV1 285 aaKnown RBP11.61□□□□□ -0.55
SMAD3-203ENST00000537194 LAMB2P55268 1798 aa11.61□□□□□ -0.55
SMAD3-203ENST00000537194 COL4A5P29400 1685 aa11.6□□□□□ -0.55
SMAD3-203ENST00000537194 C6orf229H3BNL8 230 aa11.6□□□□□ -0.55
SMAD3-203ENST00000537194 TRAF5O00463 557 aa11.6□□□□□ -0.55
SMAD3-203ENST00000537194 CHL1O00533 1208 aa11.6□□□□□ -0.55
SMAD3-203ENST00000537194 CCDC146Q8IYE0 955 aa11.6□□□□□ -0.55
SMAD3-203ENST00000537194 HHIPL1Q96JK4 782 aa11.6□□□□□ -0.55
SMAD3-203ENST00000537194 CHPF2Q9P2E5 772 aa11.6□□□□□ -0.55
SMAD3-203ENST00000537194 NSFL1CQ9UNZ2 370 aaKnown RBP11.6□□□□□ -0.55
SMAD3-203ENST00000537194 LTBP1Q14766 1721 aa11.6□□□□□ -0.55
SMAD3-203ENST00000537194 CALD1Q05682 793 aaKnown RBP11.59□□□□□ -0.55
SMAD3-203ENST00000537194 GOLGA2Q08379 1002 aa11.59□□□□□ -0.55
SMAD3-203ENST00000537194 CST9Q5W186 159 aa11.59□□□□□ -0.55
SMAD3-203ENST00000537194 LRP10Q7Z4F1 713 aa11.59□□□□□ -0.55
SMAD3-203ENST00000537194 ABHD8Q96I13 439 aa11.59□□□□□ -0.55
SMAD3-203ENST00000537194 GLIS2Q9BZE0 524 aaPredicted RBP11.59□□□□□ -0.55
SMAD3-203ENST00000537194 POLR2AP24928 1970 aaKnown RBP11.58□□□□□ -0.56
SMAD3-203ENST00000537194 RPS12P25398 132 aaKnown RBP11.58□□□□□ -0.56
SMAD3-203ENST00000537194 RIC3Q7Z5B4 369 aa11.58□□□□□ -0.56
SMAD3-203ENST00000537194 SAPCD2Q86UD0 394 aa11.58□□□□□ -0.56
SMAD3-203ENST00000537194 MICALL2Q8IY33 904 aa11.58□□□□□ -0.56
SMAD3-203ENST00000537194 DPF2Q92785 391 aa11.58□□□□□ -0.56
SMAD3-203ENST00000537194 DCPSQ96C86 337 aaKnown RBP11.58□□□□□ -0.56
SMAD3-203ENST00000537194 PGAP2Q9UHJ9 254 aa11.58□□□□□ -0.56
SMAD3-203ENST00000537194 TAF1P21675 1872 aa11.57□□□□□ -0.56
SMAD3-203ENST00000537194 ATP5J2-PTCD1G3V325 749 aa11.57□□□□□ -0.56
SMAD3-203ENST00000537194 IRS4O14654 1257 aaPredicted RBP11.57□□□□□ -0.56
SMAD3-203ENST00000537194 RIMBP2O15034 1052 aa11.57□□□□□ -0.56
SMAD3-203ENST00000537194 FMR1Q06787 632 aaKnown RBP eCLIP11.57□□□□□ -0.56
SMAD3-203ENST00000537194 DDX10Q13206 875 aaKnown RBP11.57□□□□□ -0.56
SMAD3-203ENST00000537194 NOGQ13253 232 aa11.57□□□□□ -0.56
SMAD3-203ENST00000537194 SF3B3Q15393 1217 aaKnown RBP11.57□□□□□ -0.56
SMAD3-203ENST00000537194 C2orf69Q8N8R5 385 aa11.57□□□□□ -0.56
SMAD3-203ENST00000537194 FAM89AQ96GI7 184 aa11.57□□□□□ -0.56
SMAD3-203ENST00000537194 CFAP44Q96MT7 982 aa11.57□□□□□ -0.56
SMAD3-203ENST00000537194 ZC3H12CQ9C0D7 883 aaKnown RBP11.57□□□□□ -0.56
SMAD3-203ENST00000537194 CASP8AP2Q9UKL3 1982 aa11.56□□□□□ -0.56
SMAD3-203ENST00000537194 CCDC85CA6NKD9 419 aa11.56□□□□□ -0.56
SMAD3-203ENST00000537194 DDX58O95786 925 aaKnown RBP11.56□□□□□ -0.56
SMAD3-203ENST00000537194 BRPF1P55201 1214 aaPredicted RBP11.56□□□□□ -0.56
SMAD3-203ENST00000537194 HUNKP57058 714 aa11.56□□□□□ -0.56
SMAD3-203ENST00000537194 RPS8P62241 208 aaKnown RBP11.56□□□□□ -0.56
SMAD3-203ENST00000537194 DUSP27Q5VZP5 1158 aa11.56□□□□□ -0.56
SMAD3-203ENST00000537194 KRT26Q7Z3Y9 468 aa11.56□□□□□ -0.56
SMAD3-203ENST00000537194 USP48Q86UV5 1035 aa11.56□□□□□ -0.56
SMAD3-203ENST00000537194 DBNDD1Q9H9R9 158 aa11.56□□□□□ -0.56
SMAD3-203ENST00000537194 ANKIB1Q9P2G1 1089 aa11.56□□□□□ -0.56
SMAD3-203ENST00000537194 PSMD14O00487 310 aa11.55□□□□□ -0.56
SMAD3-203ENST00000537194 ECE2O60344 883 aa11.55□□□□□ -0.56
SMAD3-203ENST00000537194 AOC2O75106 756 aa11.55□□□□□ -0.56
SMAD3-203ENST00000537194 GNAI1P63096 354 aa11.55□□□□□ -0.56
SMAD3-203ENST00000537194 TRIM28Q13263 835 aaKnown RBP11.55□□□□□ -0.56
SMAD3-203ENST00000537194 KRT24Q2M2I5 525 aa11.55□□□□□ -0.56
SMAD3-203ENST00000537194 CCDC152Q4G0S7 254 aa11.55□□□□□ -0.56
SMAD3-203ENST00000537194 RTL5Q5HYW3 569 aaPredicted RBP11.55□□□□□ -0.56
SMAD3-203ENST00000537194 SLC51AQ86UW1 340 aa11.55□□□□□ -0.56
SMAD3-203ENST00000537194 TRPM4Q8TD43 1214 aa11.55□□□□□ -0.56
SMAD3-203ENST00000537194 ZNF428Q96B54 188 aa11.55□□□□□ -0.56
SMAD3-203ENST00000537194 ISCA1Q9BUE6 129 aa11.55□□□□□ -0.56
SMAD3-203ENST00000537194 THSD7BQ9C0I4 1608 aa11.54□□□□□ -0.56
SMAD3-203ENST00000537194 YDJCA8MPS7 323 aa11.54□□□□□ -0.56
SMAD3-203ENST00000537194 TBC1D10BQ4KMP7 808 aaPredicted RBP11.54□□□□□ -0.56
SMAD3-203ENST00000537194 RBM26Q5T8P6 1007 aaKnown RBP11.54□□□□□ -0.56
SMAD3-203ENST00000537194 SAMD7Q7Z3H4 446 aa11.54□□□□□ -0.56
SMAD3-203ENST00000537194 SULF1Q8IWU6 871 aa11.54□□□□□ -0.56
SMAD3-203ENST00000537194 ZBTB38Q8NAP3 1195 aaPredicted RBP11.54□□□□□ -0.56
SMAD3-203ENST00000537194 CELF1Q92879 486 aaKnown RBP11.54□□□□□ -0.56
SMAD3-203ENST00000537194 CCDC102AQ96A19 550 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms