RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 FAM161AQ3B820 660 aa23.12■■□□□ 1.29
LTBR-206ENST00000536876 SAPCD2Q86UD0 394 aa23.12■■□□□ 1.29
LTBR-206ENST00000536876 NLRP10Q86W26 655 aa23.12■■□□□ 1.29
LTBR-206ENST00000536876 TRPM4Q8TD43 1214 aa23.12■■□□□ 1.29
LTBR-206ENST00000536876 SCN9AQ15858 1988 aa23.12■■□□□ 1.29
LTBR-206ENST00000536876 CDHR2Q9BYE9 1310 aa23.11■■□□□ 1.29
LTBR-206ENST00000536876 CELF2O95319 508 aaKnown RBP23.1■■□□□ 1.29
LTBR-206ENST00000536876 DPP8Q6V1X1 898 aaPredicted RBP23.1■■□□□ 1.29
LTBR-206ENST00000536876 SP8Q8IXZ3 490 aa23.1■■□□□ 1.29
LTBR-206ENST00000536876 TNRC18O15417 2968 aaPredicted RBP23.09■■□□□ 1.29
LTBR-206ENST00000536876 RAD17O75943 681 aa23.09■■□□□ 1.29
LTBR-206ENST00000536876 CIAPIN1Q6FI81 312 aa23.09■■□□□ 1.29
LTBR-206ENST00000536876 SUPT20HQ8NEM7 779 aa23.09■■□□□ 1.29
LTBR-206ENST00000536876 XAGE3Q8WTP9 111 aa23.09■■□□□ 1.29
LTBR-206ENST00000536876 KRT24Q2M2I5 525 aa23.08■■□□□ 1.29
LTBR-206ENST00000536876 COPS6Q7L5N1 327 aa23.08■■□□□ 1.29
LTBR-206ENST00000536876 MPNDQ8N594 471 aa23.08■■□□□ 1.29
LTBR-206ENST00000536876 NECTIN2Q92692 538 aa23.08■■□□□ 1.29
LTBR-206ENST00000536876 BBOX1O75936 387 aa23.07■■□□□ 1.28
LTBR-206ENST00000536876 MAP2K2P36507 400 aa23.07■■□□□ 1.28
LTBR-206ENST00000536876 GRAPQ13588 217 aa23.07■■□□□ 1.28
LTBR-206ENST00000536876 GRAPLQ8TC17 118 aaPredicted RBP23.07■■□□□ 1.28
LTBR-206ENST00000536876 ZNF428Q96B54 188 aa23.07■■□□□ 1.28
LTBR-206ENST00000536876 PSME4Q14997 1843 aa23.07■■□□□ 1.28
LTBR-206ENST00000536876 RIPK4P57078 832 aa23.06■■□□□ 1.28
LTBR-206ENST00000536876 DLK2Q6UY11 383 aa23.06■■□□□ 1.28
LTBR-206ENST00000536876 HHIPL1Q96JK4 782 aa23.06■■□□□ 1.28
LTBR-206ENST00000536876 BABAM1Q9NWV8 329 aa23.06■■□□□ 1.28
LTBR-206ENST00000536876 AIMP1Q12904 312 aaKnown RBP23.05■■□□□ 1.28
LTBR-206ENST00000536876 TCIRG1Q13488 830 aa23.05■■□□□ 1.28
LTBR-206ENST00000536876 ZIC5Q96T25 663 aa23.05■■□□□ 1.28
LTBR-206ENST00000536876 SH3TC1Q8TE82 1336 aa23.05■■□□□ 1.28
LTBR-206ENST00000536876 TMPOP42166 694 aaKnown RBP23.04■■□□□ 1.28
LTBR-206ENST00000536876 HSP90AB3PQ58FF7 597 aa23.04■■□□□ 1.28
LTBR-206ENST00000536876 ZC3H15Q8WU90 426 aaKnown RBP23.04■■□□□ 1.28
LTBR-206ENST00000536876 BEGAINQ9BUH8 593 aa23.04■■□□□ 1.28
LTBR-206ENST00000536876 TRMT112Q9UI30 125 aaKnown RBP23.04■■□□□ 1.28
LTBR-206ENST00000536876 SLC34A2O95436 690 aa23.03■■□□□ 1.28
LTBR-206ENST00000536876 EGFRP00533 1210 aa23.03■■□□□ 1.28
LTBR-206ENST00000536876 BRPF1P55201 1214 aaPredicted RBP23.03■■□□□ 1.28
LTBR-206ENST00000536876 DDX46Q7L014 1031 aaKnown RBP23.03■■□□□ 1.28
LTBR-206ENST00000536876 BCL2L13Q9BXK5 485 aa23.03■■□□□ 1.28
LTBR-206ENST00000536876 TMX4Q9H1E5 349 aaPredicted RBP23.03■■□□□ 1.28
LTBR-206ENST00000536876 RGS19P49795 217 aa23.02■■□□□ 1.28
LTBR-206ENST00000536876 MICALL2Q8IY33 904 aa23.02■■□□□ 1.28
LTBR-206ENST00000536876 PNNQ9H307 717 aaKnown RBP23.02■■□□□ 1.28
LTBR-206ENST00000536876 ZNF408Q9H9D4 720 aa23.02■■□□□ 1.28
LTBR-206ENST00000536876 CNOT7Q9UIV1 285 aaKnown RBP23.02■■□□□ 1.28
LTBR-206ENST00000536876 ZBTB12Q9Y330 459 aaPredicted RBP23.02■■□□□ 1.28
LTBR-206ENST00000536876 ZNF646O15015 1829 aaPredicted RBP23.02■■□□□ 1.28
LTBR-206ENST00000536876 RTL9Q8NET4 1388 aa23.01■■□□□ 1.27
LTBR-206ENST00000536876 CCDC85CA6NKD9 419 aa23.01■■□□□ 1.27
LTBR-206ENST00000536876 TNIP1Q15025 636 aa23.01■■□□□ 1.27
LTBR-206ENST00000536876 CELF1Q92879 486 aaKnown RBP23.01■■□□□ 1.27
LTBR-206ENST00000536876 CHPF2Q9P2E5 772 aa23.01■■□□□ 1.27
LTBR-206ENST00000536876 PSMD14O00487 310 aa23■■□□□ 1.27
LTBR-206ENST00000536876 ISCA1Q9BUE6 129 aa23■■□□□ 1.27
LTBR-206ENST00000536876 MCOLN1Q9GZU1 580 aa23■■□□□ 1.27
LTBR-206ENST00000536876 CHL1O00533 1208 aa22.99■■□□□ 1.27
LTBR-206ENST00000536876 CDC37L1Q7L3B6 337 aa22.99■■□□□ 1.27
LTBR-206ENST00000536876 SAMD7Q7Z3H4 446 aa22.99■■□□□ 1.27
LTBR-206ENST00000536876 DBNDD1Q9H9R9 158 aa22.99■■□□□ 1.27
LTBR-206ENST00000536876 CA12O43570 354 aa22.98■■□□□ 1.27
LTBR-206ENST00000536876 TMC4Q7Z404 712 aa22.98■■□□□ 1.27
LTBR-206ENST00000536876 USP48Q86UV5 1035 aa22.98■■□□□ 1.27
LTBR-206ENST00000536876 POLLQ9UGP5 575 aa22.98■■□□□ 1.27
LTBR-206ENST00000536876 AKAP11Q9UKA4 1901 aa22.98■■□□□ 1.27
LTBR-206ENST00000536876 FAM155AB1AL88 458 aaPredicted RBP22.97■■□□□ 1.27
LTBR-206ENST00000536876 DPF2Q92785 391 aa22.97■■□□□ 1.27
LTBR-206ENST00000536876 KCNQ5Q9NR82 932 aa22.97■■□□□ 1.27
LTBR-206ENST00000536876 TRIM35Q9UPQ4 493 aa22.97■■□□□ 1.27
LTBR-206ENST00000536876 GPSM2P81274 684 aa22.96■■□□□ 1.27
LTBR-206ENST00000536876 LMOD3Q0VAK6 560 aa22.96■■□□□ 1.27
LTBR-206ENST00000536876 SF3B3Q15393 1217 aaKnown RBP22.96■■□□□ 1.27
LTBR-206ENST00000536876 CCDC146Q8IYE0 955 aa22.96■■□□□ 1.27
LTBR-206ENST00000536876 PLBD2Q8NHP8 589 aa22.96■■□□□ 1.27
LTBR-206ENST00000536876 FAM89AQ96GI7 184 aa22.96■■□□□ 1.27
LTBR-206ENST00000536876 ADM5C9JUS6 153 aa22.95■■□□□ 1.26
LTBR-206ENST00000536876 ATP5J2-PTCD1G3V325 749 aa22.95■■□□□ 1.26
LTBR-206ENST00000536876 HUNKP57058 714 aa22.95■■□□□ 1.26
LTBR-206ENST00000536876 MLLT1Q03111 559 aaPredicted RBP22.95■■□□□ 1.26
LTBR-206ENST00000536876 TBC1D10BQ4KMP7 808 aaPredicted RBP22.95■■□□□ 1.26
LTBR-206ENST00000536876 SPEF2Q9C093 1822 aa22.94■■□□□ 1.26
LTBR-206ENST00000536876 H7C1D1 291 aa22.94■■□□□ 1.26
LTBR-206ENST00000536876 NOGQ13253 232 aa22.94■■□□□ 1.26
LTBR-206ENST00000536876 WASHC4Q2M389 1173 aa22.94■■□□□ 1.26
LTBR-206ENST00000536876 RIMBP2O15034 1052 aa22.93■■□□□ 1.26
LTBR-206ENST00000536876 ECE2O60344 883 aa22.93■■□□□ 1.26
LTBR-206ENST00000536876 HDGFL1Q5TGJ6 251 aa22.93■■□□□ 1.26
LTBR-206ENST00000536876 NSFL1CQ9UNZ2 370 aaKnown RBP22.93■■□□□ 1.26
LTBR-206ENST00000536876 ZNF609O15014 1411 aa22.92■■□□□ 1.26
LTBR-206ENST00000536876 ASTN2O75129 1339 aaPredicted RBP22.92■■□□□ 1.26
LTBR-206ENST00000536876 NEUROD2Q15784 382 aa22.92■■□□□ 1.26
LTBR-206ENST00000536876 KRT26Q7Z3Y9 468 aa22.92■■□□□ 1.26
LTBR-206ENST00000536876 PDE4DIPQ5VU43 2346 aa22.91■■□□□ 1.26
LTBR-206ENST00000536876 HOXB7P09629 217 aa22.91■■□□□ 1.26
LTBR-206ENST00000536876 DOK7Q18PE1 504 aa22.91■■□□□ 1.26
LTBR-206ENST00000536876 ANKRD13DQ6ZTN6 518 aa22.91■■□□□ 1.26
LTBR-206ENST00000536876 RPS12P25398 132 aaKnown RBP22.9■■□□□ 1.26
LTBR-206ENST00000536876 DGKZQ13574 1117 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms