RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 GRM8O00222 908 aa22.66■■□□□ 1.22
DDX55-204ENST00000536079 PPEF1O14829 653 aaPredicted RBP22.66■■□□□ 1.22
DDX55-204ENST00000536079 NBPF7P0C2Y1 421 aaPredicted RBP22.66■■□□□ 1.22
DDX55-204ENST00000536079 DDX46Q7L014 1031 aaKnown RBP22.66■■□□□ 1.22
DDX55-204ENST00000536079 TTLL11Q8NHH1 800 aa22.66■■□□□ 1.22
DDX55-204ENST00000536079 SNED1Q8TER0 1413 aa22.65■■□□□ 1.22
DDX55-204ENST00000536079 KIF16BQ96L93 1317 aa22.65■■□□□ 1.22
DDX55-204ENST00000536079 TRIM27P14373 513 aa22.65■■□□□ 1.22
DDX55-204ENST00000536079 FOXO4P98177 505 aa22.65■■□□□ 1.22
DDX55-204ENST00000536079 GRAPQ13588 217 aa22.65■■□□□ 1.22
DDX55-204ENST00000536079 GRAPLQ8TC17 118 aaPredicted RBP22.65■■□□□ 1.22
DDX55-204ENST00000536079 ARHGAP45Q92619 1136 aa22.65■■□□□ 1.22
DDX55-204ENST00000536079 PLA2G12BQ9BX93 195 aa22.65■■□□□ 1.22
DDX55-204ENST00000536079 API5Q9BZZ5 524 aaKnown RBP22.65■■□□□ 1.22
DDX55-204ENST00000536079 KAZALD1Q96I82 304 aa22.64■■□□□ 1.21
DDX55-204ENST00000536079 USP44Q9H0E7 712 aa22.64■■□□□ 1.21
DDX55-204ENST00000536079 GREM2Q9H772 168 aa22.64■■□□□ 1.21
DDX55-204ENST00000536079 YY1P25490 414 aa22.63■■□□□ 1.21
DDX55-204ENST00000536079 SUCLG2Q96I99 432 aa22.63■■□□□ 1.21
DDX55-204ENST00000536079 C9orf78Q9NZ63 289 aaPredicted RBP22.63■■□□□ 1.21
DDX55-204ENST00000536079 UTYO14607 1347 aa22.62■■□□□ 1.21
DDX55-204ENST00000536079 CSF1RP07333 972 aa22.62■■□□□ 1.21
DDX55-204ENST00000536079 CCDC152Q4G0S7 254 aa22.62■■□□□ 1.21
DDX55-204ENST00000536079 CCDC93Q567U6 631 aa22.62■■□□□ 1.21
DDX55-204ENST00000536079 ATF7IPQ6VMQ6 1270 aa22.62■■□□□ 1.21
DDX55-204ENST00000536079 CLUAP1Q96AJ1 413 aa22.62■■□□□ 1.21
DDX55-204ENST00000536079 ATP6V0A2Q9Y487 856 aa22.62■■□□□ 1.21
DDX55-204ENST00000536079 BBOX1O75936 387 aa22.61■■□□□ 1.21
DDX55-204ENST00000536079 C9orf131Q5VYM1 1079 aa22.61■■□□□ 1.21
DDX55-204ENST00000536079 HSP90B1P14625 803 aaKnown RBP22.6■■□□□ 1.21
DDX55-204ENST00000536079 FAM161AQ3B820 660 aa22.6■■□□□ 1.21
DDX55-204ENST00000536079 FER1L6Q2WGJ9 1857 aa22.6■■□□□ 1.21
DDX55-204ENST00000536079 CHD4Q14839 1912 aa22.59■■□□□ 1.21
DDX55-204ENST00000536079 IPO8O15397 1037 aaKnown RBP22.59■■□□□ 1.21
DDX55-204ENST00000536079 CCT4P50991 539 aaKnown RBP22.59■■□□□ 1.21
DDX55-204ENST00000536079 RPS8P62241 208 aaKnown RBP22.59■■□□□ 1.21
DDX55-204ENST00000536079 INTS3Q68E01 1043 aaKnown RBP22.59■■□□□ 1.21
DDX55-204ENST00000536079 SP8Q8IXZ3 490 aa22.59■■□□□ 1.21
DDX55-204ENST00000536079 TAOK3Q9H2K8 898 aa22.59■■□□□ 1.21
DDX55-204ENST00000536079 RLBP1P12271 317 aa22.58■■□□□ 1.21
DDX55-204ENST00000536079 SOGA3Q5TF21 947 aa22.58■■□□□ 1.21
DDX55-204ENST00000536079 ZKSCAN2Q63HK3 967 aa22.58■■□□□ 1.21
DDX55-204ENST00000536079 ZNF277Q9NRM2 450 aaPredicted RBP22.58■■□□□ 1.21
DDX55-204ENST00000536079 RNF181Q9P0P0 153 aa22.58■■□□□ 1.21
DDX55-204ENST00000536079 RCAN3Q9UKA8 241 aa22.58■■□□□ 1.21
DDX55-204ENST00000536079 FKBP4Q02790 459 aaKnown RBP eCLIP22.57■■□□□ 1.2
DDX55-204ENST00000536079 LMBR1LQ6UX01 489 aa22.57■■□□□ 1.2
DDX55-204ENST00000536079 RTKN2Q8IZC4 609 aa22.57■■□□□ 1.2
DDX55-204ENST00000536079 ANKRD44Q8N8A2 993 aa22.57■■□□□ 1.2
DDX55-204ENST00000536079 RTL9Q8NET4 1388 aa22.57■■□□□ 1.2
DDX55-204ENST00000536079 LTBP3Q9NS15 1303 aa22.57■■□□□ 1.2
DDX55-204ENST00000536079 LMNB1P20700 586 aa22.56■■□□□ 1.2
DDX55-204ENST00000536079 ITGA6P23229 1130 aa22.56■■□□□ 1.2
DDX55-204ENST00000536079 TMEM57Q8N5G2 664 aa22.56■■□□□ 1.2
DDX55-204ENST00000536079 BICC1Q9H694 974 aaKnown RBP22.56■■□□□ 1.2
DDX55-204ENST00000536079 SBF1O95248 1867 aa22.56■■□□□ 1.2
DDX55-204ENST00000536079 PLIN1O60240 522 aa22.55■■□□□ 1.2
DDX55-204ENST00000536079 GPSM2P81274 684 aa22.55■■□□□ 1.2
DDX55-204ENST00000536079 CC2D2BQ6DHV5 1058 aa22.55■■□□□ 1.2
DDX55-204ENST00000536079 MEIS3Q99687 375 aa22.55■■□□□ 1.2
DDX55-204ENST00000536079 ANKRD18AQ8IVF6 992 aa22.54■■□□□ 1.2
DDX55-204ENST00000536079 PSMD1Q99460 953 aa22.54■■□□□ 1.2
DDX55-204ENST00000536079 MYH3P11055 1940 aa22.54■■□□□ 1.2
DDX55-204ENST00000536079 CHMP3Q9Y3E7 222 aa22.53■■□□□ 1.2
DDX55-204ENST00000536079 COL4A5P29400 1685 aa22.52■■□□□ 1.2
DDX55-204ENST00000536079 WTIPA6NIX2 430 aaPredicted RBP22.52■■□□□ 1.2
DDX55-204ENST00000536079 RABL6Q3YEC7 729 aaPredicted RBP22.52■■□□□ 1.2
DDX55-204ENST00000536079 MPNDQ8N594 471 aa22.52■■□□□ 1.2
DDX55-204ENST00000536079 PANK1Q8TE04 598 aa22.52■■□□□ 1.2
DDX55-204ENST00000536079 ZNF594Q96JF6 807 aaPredicted RBP22.52■■□□□ 1.2
DDX55-204ENST00000536079 CDC5LQ99459 802 aaKnown RBP22.52■■□□□ 1.2
DDX55-204ENST00000536079 LRRC37AA6NMS7 1700 aa22.51■■□□□ 1.19
DDX55-204ENST00000536079 DUOX1Q9NRD9 1551 aa22.51■■□□□ 1.19
DDX55-204ENST00000536079 DPP8Q6V1X1 898 aaPredicted RBP22.51■■□□□ 1.19
DDX55-204ENST00000536079 TMC4Q7Z404 712 aa22.51■■□□□ 1.19
DDX55-204ENST00000536079 DZIP1LQ8IYY4 767 aaKnown RBP22.51■■□□□ 1.19
DDX55-204ENST00000536079 ZNF784Q8NCA9 323 aaPredicted RBP22.51■■□□□ 1.19
DDX55-204ENST00000536079 GPR101Q96P66 508 aaPredicted RBP22.51■■□□□ 1.19
DDX55-204ENST00000536079 RTFDC1Q9BY42 306 aaPredicted RBP22.51■■□□□ 1.19
DDX55-204ENST00000536079 POLLQ9UGP5 575 aa22.51■■□□□ 1.19
DDX55-204ENST00000536079 ANKRD18BA2A2Z9 1011 aa22.5■■□□□ 1.19
DDX55-204ENST00000536079 BSDC1Q9NW68 430 aaPredicted RBP22.5■■□□□ 1.19
DDX55-204ENST00000536079 NSFL1CQ9UNZ2 370 aaKnown RBP22.5■■□□□ 1.19
DDX55-204ENST00000536079 UBTFL1P0CB47 393 aaPredicted RBP22.49■■□□□ 1.19
DDX55-204ENST00000536079 IARSP41252 1262 aaKnown RBP22.49■■□□□ 1.19
DDX55-204ENST00000536079 IFIT5Q13325 482 aaKnown RBP22.49■■□□□ 1.19
DDX55-204ENST00000536079 MINPP1Q9UNW1 487 aa22.49■■□□□ 1.19
DDX55-204ENST00000536079 LRRFIP2Q9Y608 721 aaKnown RBP22.49■■□□□ 1.19
DDX55-204ENST00000536079 CCDC88AQ3V6T2 1871 aa22.49■■□□□ 1.19
DDX55-204ENST00000536079 ZNF526Q8TF50 670 aaPredicted RBP22.48■■□□□ 1.19
DDX55-204ENST00000536079 IGHMBP2P38935 993 aaKnown RBP22.47■■□□□ 1.19
DDX55-204ENST00000536079 AOC3Q16853 763 aa22.47■■□□□ 1.19
DDX55-204ENST00000536079 GRIPAP1Q4V328 841 aa22.47■■□□□ 1.19
DDX55-204ENST00000536079 C20orf194Q5TEA3 1177 aa22.47■■□□□ 1.19
DDX55-204ENST00000536079 TBC1D16Q8TBP0 767 aa22.47■■□□□ 1.19
DDX55-204ENST00000536079 TMX4Q9H1E5 349 aaPredicted RBP22.47■■□□□ 1.19
DDX55-204ENST00000536079 LTBP1Q14766 1721 aa22.47■■□□□ 1.19
DDX55-204ENST00000536079 SPEF2Q9C093 1822 aa22.47■■□□□ 1.19
DDX55-204ENST00000536079 CCDC57Q2TAC2 916 aa22.46■■□□□ 1.19
DDX55-204ENST00000536079 FTSJ3Q8IY81 847 aaKnown RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms