RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CTSWP56202 376 aa15.29■□□□□ 0.04
SCARB1-204ENST00000535005 SF3B3Q15393 1217 aaKnown RBP15.29■□□□□ 0.04
SCARB1-204ENST00000535005 SIRT2Q8IXJ6 389 aa15.29■□□□□ 0.04
SCARB1-204ENST00000535005 TTLL11Q8NHH1 800 aa15.29■□□□□ 0.04
SCARB1-204ENST00000535005 LAMB2P55268 1798 aa15.29■□□□□ 0.04
SCARB1-204ENST00000535005 KLRG2A4D1S0 409 aaPredicted RBP15.29■□□□□ 0.04
SCARB1-204ENST00000535005 LMBR1LQ6UX01 489 aa15.29■□□□□ 0.04
SCARB1-204ENST00000535005 SGIP1Q9BQI5 828 aa15.29■□□□□ 0.04
SCARB1-204ENST00000535005 BRIP1Q9BX63 1249 aa15.29■□□□□ 0.04
SCARB1-204ENST00000535005 DDX60Q8IY21 1712 aaKnown RBP15.28■□□□□ 0.04
SCARB1-204ENST00000535005 NPHP1O15259 732 aa15.28■□□□□ 0.04
SCARB1-204ENST00000535005 PDE4AP27815 886 aa15.28■□□□□ 0.04
SCARB1-204ENST00000535005 HDAC1Q13547 482 aaPredicted RBP15.28■□□□□ 0.04
SCARB1-204ENST00000535005 POLA2Q14181 598 aa15.28■□□□□ 0.04
SCARB1-204ENST00000535005 SSH3Q8TE77 659 aa15.28■□□□□ 0.04
SCARB1-204ENST00000535005 NLRP3Q96P20 1036 aa15.28■□□□□ 0.04
SCARB1-204ENST00000535005 ATF5Q9Y2D1 282 aaPredicted RBP15.28■□□□□ 0.04
SCARB1-204ENST00000535005 RTL9Q8NET4 1388 aa15.28■□□□□ 0.04
SCARB1-204ENST00000535005 HMMRO75330 724 aa15.27■□□□□ 0.04
SCARB1-204ENST00000535005 POLD1P28340 1107 aa15.27■□□□□ 0.04
SCARB1-204ENST00000535005 PNMA6EA0A0J9YXQ4 647 aa15.27■□□□□ 0.03
SCARB1-204ENST00000535005 CCDC24Q8N4L8 307 aa15.27■□□□□ 0.03
SCARB1-204ENST00000535005 SRGAP3O43295 1099 aa15.26■□□□□ 0.03
SCARB1-204ENST00000535005 CRY2Q49AN0 593 aa15.26■□□□□ 0.03
SCARB1-204ENST00000535005 CCDC152Q4G0S7 254 aa15.26■□□□□ 0.03
SCARB1-204ENST00000535005 C3orf67Q6ZVT6 689 aa15.26■□□□□ 0.03
SCARB1-204ENST00000535005 RWDD1Q9H446 243 aaPredicted RBP15.26■□□□□ 0.03
SCARB1-204ENST00000535005 PTGER2P43116 358 aa15.25■□□□□ 0.03
SCARB1-204ENST00000535005 RFX5P48382 616 aaPredicted RBP15.25■□□□□ 0.03
SCARB1-204ENST00000535005 MYH3P11055 1940 aa15.25■□□□□ 0.03
SCARB1-204ENST00000535005 PDE6BP35913 854 aa15.24■□□□□ 0.03
SCARB1-204ENST00000535005 GREM2Q9H772 168 aa15.24■□□□□ 0.03
SCARB1-204ENST00000535005 PDZRN3Q9UPQ7 1066 aa15.24■□□□□ 0.03
SCARB1-204ENST00000535005 C10orf71Q711Q0 1435 aa15.24■□□□□ 0.03
SCARB1-204ENST00000535005 FAM161AQ3B820 660 aa15.24■□□□□ 0.03
SCARB1-204ENST00000535005 SPON1Q9HCB6 807 aa15.24■□□□□ 0.03
SCARB1-204ENST00000535005 COPRSQ9NQ92 184 aa15.24■□□□□ 0.03
SCARB1-204ENST00000535005 TNRC6CQ9HCJ0 1690 aaKnown RBP15.23■□□□□ 0.03
SCARB1-204ENST00000535005 IGHDP01880 384 aa15.23■□□□□ 0.03
SCARB1-204ENST00000535005 HOXA10P31260 410 aaPredicted RBP15.23■□□□□ 0.03
SCARB1-204ENST00000535005 IFIT5Q13325 482 aaKnown RBP15.23■□□□□ 0.03
SCARB1-204ENST00000535005 CCDC57Q2TAC2 916 aa15.23■□□□□ 0.03
SCARB1-204ENST00000535005 DCTPP1Q9H773 170 aa15.23■□□□□ 0.03
SCARB1-204ENST00000535005 ANKRD18BA2A2Z9 1011 aa15.22■□□□□ 0.03
SCARB1-204ENST00000535005 ITGA6P23229 1130 aa15.22■□□□□ 0.03
SCARB1-204ENST00000535005 PTPN12Q05209 780 aaKnown RBP15.22■□□□□ 0.03
SCARB1-204ENST00000535005 CHMP3Q9Y3E7 222 aa15.22■□□□□ 0.03
SCARB1-204ENST00000535005 ANKRD31Q8N7Z5 1873 aa15.22■□□□□ 0.03
SCARB1-204ENST00000535005 CCDC85AQ96PX6 553 aaPredicted RBP15.22■□□□□ 0.03
SCARB1-204ENST00000535005 FBXO3Q9UK99 471 aa15.22■□□□□ 0.03
SCARB1-204ENST00000535005 SRGNP10124 158 aa15.21■□□□□ 0.03
SCARB1-204ENST00000535005 CRAMP1Q96RY5 1269 aa15.21■□□□□ 0.03
SCARB1-204ENST00000535005 DDX46Q7L014 1031 aaKnown RBP15.2■□□□□ 0.02
SCARB1-204ENST00000535005 SMC5Q8IY18 1101 aa15.2■□□□□ 0.02
SCARB1-204ENST00000535005 GCC1Q96CN9 775 aa15.2■□□□□ 0.02
SCARB1-204ENST00000535005 CDC5LQ99459 802 aaKnown RBP15.2■□□□□ 0.02
SCARB1-204ENST00000535005 SEC31BQ9NQW1 1179 aa15.2■□□□□ 0.02
SCARB1-204ENST00000535005 KDM2BQ8NHM5 1336 aa15.2■□□□□ 0.02
SCARB1-204ENST00000535005 NPR1P16066 1061 aa15.2■□□□□ 0.02
SCARB1-204ENST00000535005 HSP90AB4PQ58FF6 505 aa15.2■□□□□ 0.02
SCARB1-204ENST00000535005 RPGRQ92834 1020 aaKnown RBP15.2■□□□□ 0.02
SCARB1-204ENST00000535005 RBM17Q96I25 401 aaKnown RBP15.2■□□□□ 0.02
SCARB1-204ENST00000535005 CD2APQ9Y5K6 639 aa15.2■□□□□ 0.02
SCARB1-204ENST00000535005 KIF13BQ9NQT8 1826 aa15.19■□□□□ 0.02
SCARB1-204ENST00000535005 H0YIN7 160 aa15.19■□□□□ 0.02
SCARB1-204ENST00000535005 SURF6O75683 361 aaKnown RBP15.19■□□□□ 0.02
SCARB1-204ENST00000535005 CIAO1O76071 339 aa15.19■□□□□ 0.02
SCARB1-204ENST00000535005 CENPQQ7L2Z9 268 aaPredicted RBP15.19■□□□□ 0.02
SCARB1-204ENST00000535005 C2CD5Q86YS7 1000 aa15.19■□□□□ 0.02
SCARB1-204ENST00000535005 MASTLQ96GX5 879 aa15.19■□□□□ 0.02
SCARB1-204ENST00000535005 PA2G4Q9UQ80 394 aaKnown RBP15.19■□□□□ 0.02
SCARB1-204ENST00000535005 EYA2O00167 538 aa15.18■□□□□ 0.02
SCARB1-204ENST00000535005 RAB11FIP3O75154 756 aa15.18■□□□□ 0.02
SCARB1-204ENST00000535005 TGFB2P61812 414 aa15.18■□□□□ 0.02
SCARB1-204ENST00000535005 RPS8P62241 208 aaKnown RBP15.18■□□□□ 0.02
SCARB1-204ENST00000535005 GRAPQ13588 217 aa15.18■□□□□ 0.02
SCARB1-204ENST00000535005 TAF7LQ5H9L4 462 aa15.18■□□□□ 0.02
SCARB1-204ENST00000535005 STYK1Q6J9G0 422 aa15.18■□□□□ 0.02
SCARB1-204ENST00000535005 KLHDC4Q8TBB5 520 aa15.18■□□□□ 0.02
SCARB1-204ENST00000535005 GRAPLQ8TC17 118 aaPredicted RBP15.18■□□□□ 0.02
SCARB1-204ENST00000535005 ZNF594Q96JF6 807 aaPredicted RBP15.18■□□□□ 0.02
SCARB1-204ENST00000535005 ANKRD18AQ8IVF6 992 aa15.17■□□□□ 0.02
SCARB1-204ENST00000535005 CELF1Q92879 486 aaKnown RBP15.17■□□□□ 0.02
SCARB1-204ENST00000535005 LRP5O75197 1615 aa15.17■□□□□ 0.02
SCARB1-204ENST00000535005 BBOX1O75936 387 aa15.17■□□□□ 0.02
SCARB1-204ENST00000535005 ALDH1B1P30837 517 aa15.17■□□□□ 0.02
SCARB1-204ENST00000535005 IGHMBP2P38935 993 aaKnown RBP15.17■□□□□ 0.02
SCARB1-204ENST00000535005 G3BP1Q13283 466 aaKnown RBP eCLIP15.17■□□□□ 0.02
SCARB1-204ENST00000535005 LDHAL6AQ6ZMR3 332 aa15.17■□□□□ 0.02
SCARB1-204ENST00000535005 ATG9AQ7Z3C6 839 aa15.17■□□□□ 0.02
SCARB1-204ENST00000535005 BSDC1Q9NW68 430 aaPredicted RBP15.17■□□□□ 0.02
SCARB1-204ENST00000535005 EXOC6BQ9Y2D4 811 aa15.17■□□□□ 0.02
SCARB1-204ENST00000535005 RIPOR2Q9Y4F9 1068 aa15.17■□□□□ 0.02
SCARB1-204ENST00000535005 IL15P40933 162 aaPredicted RBP15.16■□□□□ 0.02
SCARB1-204ENST00000535005 ERC1Q8IUD2 1116 aa15.16■□□□□ 0.02
SCARB1-204ENST00000535005 TMC4Q7Z404 712 aa15.15■□□□□ 0.02
SCARB1-204ENST00000535005 MPHOSPH8Q99549 860 aa15.15■□□□□ 0.02
SCARB1-204ENST00000535005 PUS3Q9BZE2 481 aaKnown RBP15.15■□□□□ 0.02
SCARB1-204ENST00000535005 SIL1Q9H173 461 aa15.15■□□□□ 0.02
SCARB1-204ENST00000535005 COL11A2P13942 1736 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms