RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 RALBP1Q15311 655 aa27.92■■■□□ 2.06
SSH3-211ENST00000534112 TLL2Q9Y6L7 1015 aa27.92■■■□□ 2.06
SSH3-211ENST00000534112 SH3TC1Q8TE82 1336 aa27.92■■■□□ 2.06
SSH3-211ENST00000534112 GRAPQ13588 217 aa27.91■■■□□ 2.06
SSH3-211ENST00000534112 CIAPIN1Q6FI81 312 aa27.91■■■□□ 2.06
SSH3-211ENST00000534112 GRAPLQ8TC17 118 aaPredicted RBP27.91■■■□□ 2.06
SSH3-211ENST00000534112 CHL1O00533 1208 aa27.9■■■□□ 2.06
SSH3-211ENST00000534112 KRT24Q2M2I5 525 aa27.9■■■□□ 2.06
SSH3-211ENST00000534112 RAD17O75943 681 aa27.89■■■□□ 2.06
SSH3-211ENST00000534112 TNIP1Q15025 636 aa27.89■■■□□ 2.06
SSH3-211ENST00000534112 BEGAINQ9BUH8 593 aa27.89■■■□□ 2.06
SSH3-211ENST00000534112 PGAP2Q9UHJ9 254 aa27.89■■■□□ 2.06
SSH3-211ENST00000534112 NEUROD2Q15784 382 aa27.88■■■□□ 2.05
SSH3-211ENST00000534112 BCL2L13Q9BXK5 485 aa27.88■■■□□ 2.05
SSH3-211ENST00000534112 CELF2O95319 508 aaKnown RBP27.87■■■□□ 2.05
SSH3-211ENST00000534112 SAPCD2Q86UD0 394 aa27.87■■■□□ 2.05
SSH3-211ENST00000534112 ABHD8Q96I13 439 aa27.87■■■□□ 2.05
SSH3-211ENST00000534112 GLIS2Q9BZE0 524 aaPredicted RBP27.87■■■□□ 2.05
SSH3-211ENST00000534112 CDHR2Q9BYE9 1310 aa27.87■■■□□ 2.05
SSH3-211ENST00000534112 HIRAP54198 1017 aaPredicted RBP27.86■■■□□ 2.05
SSH3-211ENST00000534112 TMC4Q7Z404 712 aa27.86■■■□□ 2.05
SSH3-211ENST00000534112 CCDC146Q8IYE0 955 aa27.86■■■□□ 2.05
SSH3-211ENST00000534112 ZC3H15Q8WU90 426 aaKnown RBP27.86■■■□□ 2.05
SSH3-211ENST00000534112 ZNF428Q96B54 188 aa27.86■■■□□ 2.05
SSH3-211ENST00000534112 CHPF2Q9P2E5 772 aa27.86■■■□□ 2.05
SSH3-211ENST00000534112 LAS1LQ9Y4W2 734 aaKnown RBP27.86■■■□□ 2.05
SSH3-211ENST00000534112 YDJCA8MPS7 323 aa27.85■■■□□ 2.05
SSH3-211ENST00000534112 MAP2K2P36507 400 aa27.85■■■□□ 2.05
SSH3-211ENST00000534112 AOC2O75106 756 aa27.84■■■□□ 2.05
SSH3-211ENST00000534112 CNOT7Q9UIV1 285 aaKnown RBP27.84■■■□□ 2.05
SSH3-211ENST00000534112 PLBD2Q8NHP8 589 aa27.83■■■□□ 2.05
SSH3-211ENST00000534112 TRPM4Q8TD43 1214 aa27.83■■■□□ 2.05
SSH3-211ENST00000534112 TRIM35Q9UPQ4 493 aa27.83■■■□□ 2.05
SSH3-211ENST00000534112 HDGFL1Q5TGJ6 251 aa27.82■■■□□ 2.04
SSH3-211ENST00000534112 ANKRD13DQ6ZTN6 518 aa27.82■■■□□ 2.04
SSH3-211ENST00000534112 SHTN1A0MZ66 631 aa27.81■■■□□ 2.04
SSH3-211ENST00000534112 H7C1D1 291 aa27.81■■■□□ 2.04
SSH3-211ENST00000534112 CDC37L1Q7L3B6 337 aa27.81■■■□□ 2.04
SSH3-211ENST00000534112 FAM89AQ96GI7 184 aa27.81■■■□□ 2.04
SSH3-211ENST00000534112 HHIPL1Q96JK4 782 aa27.81■■■□□ 2.04
SSH3-211ENST00000534112 ISCA1Q9BUE6 129 aa27.81■■■□□ 2.04
SSH3-211ENST00000534112 THSD7BQ9C0I4 1608 aa27.81■■■□□ 2.04
SSH3-211ENST00000534112 SF3B3Q15393 1217 aaKnown RBP27.8■■■□□ 2.04
SSH3-211ENST00000534112 RUNDC1Q96C34 613 aa27.8■■■□□ 2.04
SSH3-211ENST00000534112 ZNF408Q9H9D4 720 aa27.8■■■□□ 2.04
SSH3-211ENST00000534112 TRPM7Q96QT4 1865 aa27.8■■■□□ 2.04
SSH3-211ENST00000534112 ANKRD36CQ5JPF3 1778 aa27.79■■■□□ 2.04
SSH3-211ENST00000534112 ATP5J2-PTCD1G3V325 749 aa27.79■■■□□ 2.04
SSH3-211ENST00000534112 HOXB7P09629 217 aa27.79■■■□□ 2.04
SSH3-211ENST00000534112 WASHC4Q2M389 1173 aa27.79■■■□□ 2.04
SSH3-211ENST00000534112 MICALL2Q8IY33 904 aa27.79■■■□□ 2.04
SSH3-211ENST00000534112 CELF1Q92879 486 aaKnown RBP27.79■■■□□ 2.04
SSH3-211ENST00000534112 DBF4Q9UBU7 674 aaPredicted RBP27.79■■■□□ 2.04
SSH3-211ENST00000534112 TSKSQ9UJT2 592 aa27.79■■■□□ 2.04
SSH3-211ENST00000534112 NSFL1CQ9UNZ2 370 aaKnown RBP27.79■■■□□ 2.04
SSH3-211ENST00000534112 ZBTB12Q9Y330 459 aaPredicted RBP27.79■■■□□ 2.04
SSH3-211ENST00000534112 LAMB2P55268 1798 aa27.78■■■□□ 2.04
SSH3-211ENST00000534112 MYBBP1AQ9BQG0 1328 aaKnown RBP27.78■■■□□ 2.04
SSH3-211ENST00000534112 DPF2Q92785 391 aa27.77■■■□□ 2.04
SSH3-211ENST00000534112 PSMD14O00487 310 aa27.76■■■□□ 2.03
SSH3-211ENST00000534112 USP48Q86UV5 1035 aa27.76■■■□□ 2.03
SSH3-211ENST00000534112 DBNDD1Q9H9R9 158 aa27.76■■■□□ 2.03
SSH3-211ENST00000534112 POLLQ9UGP5 575 aa27.76■■■□□ 2.03
SSH3-211ENST00000534112 DUOX1Q9NRD9 1551 aa27.76■■■□□ 2.03
SSH3-211ENST00000534112 C6orf229H3BNL8 230 aa27.75■■■□□ 2.03
SSH3-211ENST00000534112 RIMBP2O15034 1052 aa27.75■■■□□ 2.03
SSH3-211ENST00000534112 CA12O43570 354 aa27.75■■■□□ 2.03
SSH3-211ENST00000534112 WDR43Q15061 677 aaKnown RBP eCLIP27.75■■■□□ 2.03
SSH3-211ENST00000534112 RTL5Q5HYW3 569 aaPredicted RBP27.75■■■□□ 2.03
SSH3-211ENST00000534112 SAMD7Q7Z3H4 446 aa27.75■■■□□ 2.03
SSH3-211ENST00000534112 HYPKQ9NX55 129 aa27.75■■■□□ 2.03
SSH3-211ENST00000534112 BRPF1P55201 1214 aaPredicted RBP27.74■■■□□ 2.03
SSH3-211ENST00000534112 GPSM2P81274 684 aa27.74■■■□□ 2.03
SSH3-211ENST00000534112 TRIM28Q13263 835 aaKnown RBP27.74■■■□□ 2.03
SSH3-211ENST00000534112 DUSP27Q5VZP5 1158 aa27.74■■■□□ 2.03
SSH3-211ENST00000534112 CFAP44Q96MT7 982 aa27.74■■■□□ 2.03
SSH3-211ENST00000534112 DDX10Q13206 875 aaKnown RBP27.73■■■□□ 2.03
SSH3-211ENST00000534112 ADAMTS8Q9UP79 889 aa27.73■■■□□ 2.03
SSH3-211ENST00000534112 TAF1P21675 1872 aa27.72■■■□□ 2.03
SSH3-211ENST00000534112 IRS4O14654 1257 aaPredicted RBP27.72■■■□□ 2.03
SSH3-211ENST00000534112 DLK2Q6UY11 383 aa27.72■■■□□ 2.03
SSH3-211ENST00000534112 KCNQ5Q9NR82 932 aa27.72■■■□□ 2.03
SSH3-211ENST00000534112 CCDC85CA6NKD9 419 aa27.71■■■□□ 2.03
SSH3-211ENST00000534112 RPS8P62241 208 aaKnown RBP27.71■■■□□ 2.03
SSH3-211ENST00000534112 DOK7Q18PE1 504 aa27.71■■■□□ 2.03
SSH3-211ENST00000534112 TBC1D10BQ4KMP7 808 aaPredicted RBP27.71■■■□□ 2.03
SSH3-211ENST00000534112 EYA3Q99504 573 aa27.71■■■□□ 2.03
SSH3-211ENST00000534112 ECE2O60344 883 aa27.7■■■□□ 2.02
SSH3-211ENST00000534112 EGFRP00533 1210 aa27.7■■■□□ 2.02
SSH3-211ENST00000534112 RPS12P25398 132 aaKnown RBP27.7■■■□□ 2.02
SSH3-211ENST00000534112 HUNKP57058 714 aa27.7■■■□□ 2.02
SSH3-211ENST00000534112 NOGQ13253 232 aa27.69■■■□□ 2.02
SSH3-211ENST00000534112 FAM161AQ3B820 660 aa27.69■■■□□ 2.02
SSH3-211ENST00000534112 KRT26Q7Z3Y9 468 aa27.69■■■□□ 2.02
SSH3-211ENST00000534112 TBC1D16Q8TBP0 767 aa27.69■■■□□ 2.02
SSH3-211ENST00000534112 MBIPQ9NS73 344 aa27.69■■■□□ 2.02
SSH3-211ENST00000534112 LRRC37AA6NMS7 1700 aa27.69■■■□□ 2.02
SSH3-211ENST00000534112 ZIC5Q96T25 663 aa27.68■■■□□ 2.02
SSH3-211ENST00000534112 RTL9Q8NET4 1388 aa27.68■■■□□ 2.02
SSH3-211ENST00000534112 DDX60Q8IY21 1712 aaKnown RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms