RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 PDPK1O15530 556 aa5.89□□□□□ -1.47
C11orf54-213ENST00000533585 BPNT1O95861 308 aa5.89□□□□□ -1.47
C11orf54-213ENST00000533585 FOSP01100 380 aaPredicted RBP5.89□□□□□ -1.47
C11orf54-213ENST00000533585 HSP90AA1P07900 732 aaKnown RBP5.89□□□□□ -1.47
C11orf54-213ENST00000533585 ATF3P18847 181 aa5.89□□□□□ -1.47
C11orf54-213ENST00000533585 EPHA4P54764 986 aa5.89□□□□□ -1.47
C11orf54-213ENST00000533585 PPP4CP60510 307 aa5.89□□□□□ -1.47
C11orf54-213ENST00000533585 HLTFQ14527 1009 aaKnown RBP eCLIP5.89□□□□□ -1.47
C11orf54-213ENST00000533585 TTF1Q15361 905 aaPredicted RBP5.89□□□□□ -1.47
C11orf54-213ENST00000533585 ERFEQ4G0M1 354 aa5.89□□□□□ -1.47
C11orf54-213ENST00000533585 C2orf27AQ580R0 203 aa5.89□□□□□ -1.47
C11orf54-213ENST00000533585 AXDND1Q5T1B0 1012 aaPredicted RBP5.89□□□□□ -1.47
C11orf54-213ENST00000533585 CHAC2Q8WUX2 184 aa5.89□□□□□ -1.47
C11orf54-213ENST00000533585 PPM1EQ8WY54 764 aa5.89□□□□□ -1.47
C11orf54-213ENST00000533585 EAF1Q96JC9 268 aaPredicted RBP5.89□□□□□ -1.47
C11orf54-213ENST00000533585 NAP1L5Q96NT1 182 aaPredicted RBP5.89□□□□□ -1.47
C11orf54-213ENST00000533585 ARPC5LQ9BPX5 153 aa5.89□□□□□ -1.47
C11orf54-213ENST00000533585 ZBED2Q9BTP6 218 aa5.89□□□□□ -1.47
C11orf54-213ENST00000533585 RSRP1Q9BUV0 290 aa5.89□□□□□ -1.47
C11orf54-213ENST00000533585 ST7Q9NRC1 585 aa5.89□□□□□ -1.47
C11orf54-213ENST00000533585 PCDH10Q9P2E7 1040 aa5.89□□□□□ -1.47
C11orf54-213ENST00000533585 RABGEF1Q9UJ41 708 aa5.89□□□□□ -1.47
C11orf54-213ENST00000533585 CHMP3Q9Y3E7 222 aa5.89□□□□□ -1.47
C11orf54-213ENST00000533585 NRDCO43847 1150 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 RGS20O76081 388 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 ASMTLO95671 621 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 CD53P19397 219 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 BDNFP23560 247 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 SCNN1DP51172 638 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 RAB15P59190 212 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 POU5F1BQ06416 359 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 RASGRF1Q13972 1273 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 DALRD3Q5D0E6 543 aaKnown RBP5.88□□□□□ -1.47
C11orf54-213ENST00000533585 CT47A1Q5JQC4 288 aaPredicted RBP5.88□□□□□ -1.47
C11orf54-213ENST00000533585 TBCELQ5QJ74 424 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 MAMSTRQ6ZN01 415 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 BPHLQ86WA6 291 aaPredicted RBP5.88□□□□□ -1.47
C11orf54-213ENST00000533585 DDX42Q86XP3 938 aaKnown RBP eCLIP5.88□□□□□ -1.47
C11orf54-213ENST00000533585 SLC9A9Q8IVB4 645 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 CELF2-AS1Q8N7Q2 184 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 EPS8L3Q8TE67 593 aaKnown RBP5.88□□□□□ -1.47
C11orf54-213ENST00000533585 THAP3Q8WTV1 239 aaPredicted RBP5.88□□□□□ -1.47
C11orf54-213ENST00000533585 CCDC74AQ96AQ1 378 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 ZNF512BQ96KM6 892 aaPredicted RBP5.88□□□□□ -1.47
C11orf54-213ENST00000533585 NOC4LQ9BVI4 516 aaKnown RBP5.88□□□□□ -1.47
C11orf54-213ENST00000533585 PRR14Q9BWN1 585 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 SRRTQ9BXP5 876 aaKnown RBP5.88□□□□□ -1.47
C11orf54-213ENST00000533585 SRCIN1Q9C0H9 1055 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 RBSNQ9H1K0 784 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 ZSWIM6Q9HCJ5 1215 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 AVENQ9NQS1 362 aaPredicted RBP5.88□□□□□ -1.47
C11orf54-213ENST00000533585 PLAAQ9Y263 795 aa5.88□□□□□ -1.47
C11orf54-213ENST00000533585 WASLO00401 505 aaPredicted RBP5.87□□□□□ -1.47
C11orf54-213ENST00000533585 NPHP1O15259 732 aa5.87□□□□□ -1.47
C11orf54-213ENST00000533585 DXOO77932 396 aaKnown RBP5.87□□□□□ -1.47
C11orf54-213ENST00000533585 LIG1P18858 919 aa5.87□□□□□ -1.47
C11orf54-213ENST00000533585 PMLP29590 882 aa5.87□□□□□ -1.47
C11orf54-213ENST00000533585 GBP2P32456 591 aaPredicted RBP5.87□□□□□ -1.47
C11orf54-213ENST00000533585 IRS1P35568 1242 aa5.87□□□□□ -1.47
C11orf54-213ENST00000533585 PDE6BP35913 854 aa5.87□□□□□ -1.47
C11orf54-213ENST00000533585 EIF4A3P38919 411 aaKnown RBP5.87□□□□□ -1.47
C11orf54-213ENST00000533585 DDR2Q16832 855 aa5.87□□□□□ -1.47
C11orf54-213ENST00000533585 GPR153Q6NV75 609 aa5.87□□□□□ -1.47
C11orf54-213ENST00000533585 SH3RF1Q7Z6J0 888 aa5.87□□□□□ -1.47
C11orf54-213ENST00000533585 SCUBE3Q8IX30 993 aa5.87□□□□□ -1.47
C11orf54-213ENST00000533585 ETFBKMTQ8IXQ9 262 aa5.87□□□□□ -1.47
C11orf54-213ENST00000533585 SYNPOQ8N3V7 929 aa5.87□□□□□ -1.47
C11orf54-213ENST00000533585 PAF1Q8N7H5 531 aa5.87□□□□□ -1.47
C11orf54-213ENST00000533585 ZNF296Q8WUU4 475 aaPredicted RBP5.87□□□□□ -1.47
C11orf54-213ENST00000533585 THAP11Q96EK4 314 aa5.87□□□□□ -1.47
C11orf54-213ENST00000533585 SLC39A13Q96H72 371 aa5.87□□□□□ -1.47
C11orf54-213ENST00000533585 NGLY1Q96IV0 654 aa5.87□□□□□ -1.47
C11orf54-213ENST00000533585 UNC93B1Q9H1C4 597 aa5.87□□□□□ -1.47
C11orf54-213ENST00000533585 JADE2Q9NQC1 790 aa5.87□□□□□ -1.47
C11orf54-213ENST00000533585 MCM8Q9UJA3 840 aa5.87□□□□□ -1.47
C11orf54-213ENST00000533585 KCNQ2O43526 872 aa5.86□□□□□ -1.47
C11orf54-213ENST00000533585 FGAP02671 866 aa5.86□□□□□ -1.47
C11orf54-213ENST00000533585 INHAP05111 366 aa5.86□□□□□ -1.47
C11orf54-213ENST00000533585 RPLP1P05386 114 aaKnown RBP5.86□□□□□ -1.47
C11orf54-213ENST00000533585 SCTRP47872 440 aa5.86□□□□□ -1.47
C11orf54-213ENST00000533585 PSMA6P60900 246 aaKnown RBP5.86□□□□□ -1.47
C11orf54-213ENST00000533585 LRRC41Q15345 812 aa5.86□□□□□ -1.47
C11orf54-213ENST00000533585 C11orf91Q3C1V1 193 aa5.86□□□□□ -1.47
C11orf54-213ENST00000533585 MTERF2Q49AM1 385 aa5.86□□□□□ -1.47
C11orf54-213ENST00000533585 TTC39BQ5VTQ0 682 aaPredicted RBP5.86□□□□□ -1.47
C11orf54-213ENST00000533585 KSR2Q6VAB6 950 aa5.86□□□□□ -1.47
C11orf54-213ENST00000533585 C14orf80Q86SX3 495 aa5.86□□□□□ -1.47
C11orf54-213ENST00000533585 MYO1HQ8N1T3 1032 aa5.86□□□□□ -1.47
C11orf54-213ENST00000533585 GPR152Q8TDT2 470 aa5.86□□□□□ -1.47
C11orf54-213ENST00000533585 SLC39A7Q92504 469 aa5.86□□□□□ -1.47
C11orf54-213ENST00000533585 NUDT16Q96DE0 195 aaKnown RBP5.86□□□□□ -1.47
C11orf54-213ENST00000533585 NT5C1AQ9BXI3 368 aa5.86□□□□□ -1.47
C11orf54-213ENST00000533585 FAM126AQ9BYI3 521 aaPredicted RBP5.86□□□□□ -1.47
C11orf54-213ENST00000533585 ZNF700Q9H0M5 742 aa5.86□□□□□ -1.47
C11orf54-213ENST00000533585 GGNBP2Q9H3C7 697 aa5.86□□□□□ -1.47
C11orf54-213ENST00000533585 CHST12Q9NRB3 414 aa5.86□□□□□ -1.47
C11orf54-213ENST00000533585 CDV3Q9UKY7 258 aaKnown RBP5.86□□□□□ -1.47
C11orf54-213ENST00000533585 CD2APQ9Y5K6 639 aa5.86□□□□□ -1.47
C11orf54-213ENST00000533585 WASHC2CQ9Y4E1 1318 aa5.85□□□□□ -1.47
C11orf54-213ENST00000533585 A6NHS1 94 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms