RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 SLC10A5Q5PT55 438 aa16.46■□□□□ 0.23
CAPN1-223ENST00000533079 BCL2L13Q9BXK5 485 aa16.46■□□□□ 0.23
CAPN1-223ENST00000533079 RRP7AQ9Y3A4 280 aaKnown RBP16.46■□□□□ 0.23
CAPN1-223ENST00000533079 DUOX1Q9NRD9 1551 aa16.46■□□□□ 0.23
CAPN1-223ENST00000533079 TCERG1O14776 1098 aaKnown RBP16.45■□□□□ 0.22
CAPN1-223ENST00000533079 BBOX1O75936 387 aa16.45■□□□□ 0.22
CAPN1-223ENST00000533079 CNGB1Q14028 1251 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-223ENST00000533079 SP8Q8IXZ3 490 aa16.45■□□□□ 0.22
CAPN1-223ENST00000533079 ZNF408Q9H9D4 720 aa16.45■□□□□ 0.22
CAPN1-223ENST00000533079 C3orf67Q6ZVT6 689 aa16.44■□□□□ 0.22
CAPN1-223ENST00000533079 TMC4Q7Z404 712 aa16.44■□□□□ 0.22
CAPN1-223ENST00000533079 SLC51AQ86UW1 340 aa16.44■□□□□ 0.22
CAPN1-223ENST00000533079 MPNDQ8N594 471 aa16.44■□□□□ 0.22
CAPN1-223ENST00000533079 UTP14AQ9BVJ6 771 aaKnown RBP16.44■□□□□ 0.22
CAPN1-223ENST00000533079 MIS18AQ9NYP9 233 aa16.44■□□□□ 0.22
CAPN1-223ENST00000533079 H7C1D1 291 aa16.43■□□□□ 0.22
CAPN1-223ENST00000533079 PPP2R1AP30153 589 aa16.43■□□□□ 0.22
CAPN1-223ENST00000533079 HUNKP57058 714 aa16.43■□□□□ 0.22
CAPN1-223ENST00000533079 TRPM4Q8TD43 1214 aa16.43■□□□□ 0.22
CAPN1-223ENST00000533079 HIRAP54198 1017 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-223ENST00000533079 DPF2Q92785 391 aa16.42■□□□□ 0.22
CAPN1-223ENST00000533079 CNOT7Q9UIV1 285 aaKnown RBP16.42■□□□□ 0.22
CAPN1-223ENST00000533079 CASP8AP2Q9UKL3 1982 aa16.42■□□□□ 0.22
CAPN1-223ENST00000533079 RAD17O75943 681 aa16.41■□□□□ 0.22
CAPN1-223ENST00000533079 GRAPQ13588 217 aa16.41■□□□□ 0.22
CAPN1-223ENST00000533079 HSP90AB3PQ58FF7 597 aa16.41■□□□□ 0.22
CAPN1-223ENST00000533079 GRAPLQ8TC17 118 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-223ENST00000533079 CCDC102AQ96A19 550 aa16.41■□□□□ 0.22
CAPN1-223ENST00000533079 RGMBQ6NW40 437 aa16.4■□□□□ 0.22
CAPN1-223ENST00000533079 DDX46Q7L014 1031 aaKnown RBP16.4■□□□□ 0.22
CAPN1-223ENST00000533079 LRP10Q7Z4F1 713 aa16.4■□□□□ 0.22
CAPN1-223ENST00000533079 MICALL2Q8IY33 904 aa16.4■□□□□ 0.22
CAPN1-223ENST00000533079 FAM155AB1AL88 458 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-223ENST00000533079 RPS12P25398 132 aaKnown RBP16.39■□□□□ 0.21
CAPN1-223ENST00000533079 C2orf69Q8N8R5 385 aa16.39■□□□□ 0.21
CAPN1-223ENST00000533079 GBA2Q9HCG7 927 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-223ENST00000533079 YDJCA8MPS7 323 aa16.38■□□□□ 0.21
CAPN1-223ENST00000533079 NFE2L2Q16236 605 aa16.38■□□□□ 0.21
CAPN1-223ENST00000533079 KRT26Q7Z3Y9 468 aa16.38■□□□□ 0.21
CAPN1-223ENST00000533079 REM2Q8IYK8 340 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-223ENST00000533079 USP48Q86UV5 1035 aa16.37■□□□□ 0.21
CAPN1-223ENST00000533079 PNNQ9H307 717 aaKnown RBP16.37■□□□□ 0.21
CAPN1-223ENST00000533079 SH3TC1Q8TE82 1336 aa16.37■□□□□ 0.21
CAPN1-223ENST00000533079 ZNF609O15014 1411 aa16.36■□□□□ 0.21
CAPN1-223ENST00000533079 PDIA6Q15084 440 aa16.36■□□□□ 0.21
CAPN1-223ENST00000533079 PRPF38BQ5VTL8 546 aaKnown RBP16.36■□□□□ 0.21
CAPN1-223ENST00000533079 NLRP10Q86W26 655 aa16.36■□□□□ 0.21
CAPN1-223ENST00000533079 DCPSQ96C86 337 aaKnown RBP16.36■□□□□ 0.21
CAPN1-223ENST00000533079 PLEKHF1Q96S99 279 aa16.36■□□□□ 0.21
CAPN1-223ENST00000533079 ZIC5Q96T25 663 aa16.36■□□□□ 0.21
CAPN1-223ENST00000533079 BABAM1Q9NWV8 329 aa16.36■□□□□ 0.21
CAPN1-223ENST00000533079 SLC10A3P09131 477 aa16.35■□□□□ 0.21
CAPN1-223ENST00000533079 ZNF157P51786 506 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-223ENST00000533079 WASHC4Q2M389 1173 aa16.35■□□□□ 0.21
CAPN1-223ENST00000533079 TSPYL4Q9UJ04 414 aa16.35■□□□□ 0.21
CAPN1-223ENST00000533079 MAPK8IP3Q9UPT6 1336 aa16.35■□□□□ 0.21
CAPN1-223ENST00000533079 AKAP11Q9UKA4 1901 aa16.35■□□□□ 0.21
CAPN1-223ENST00000533079 SHTN1A0MZ66 631 aa16.34■□□□□ 0.21
CAPN1-223ENST00000533079 PSMD14O00487 310 aa16.34■□□□□ 0.21
CAPN1-223ENST00000533079 HCLS1P14317 486 aaPredicted RBP16.34■□□□□ 0.21
CAPN1-223ENST00000533079 KIF23Q02241 960 aaPredicted RBP16.34■□□□□ 0.21
CAPN1-223ENST00000533079 SAMD7Q7Z3H4 446 aa16.34■□□□□ 0.21
CAPN1-223ENST00000533079 RNF186Q9NXI6 227 aa16.34■□□□□ 0.21
CAPN1-223ENST00000533079 TRMT112Q9UI30 125 aaKnown RBP16.34■□□□□ 0.21
CAPN1-223ENST00000533079 ZBTB12Q9Y330 459 aaPredicted RBP16.34■□□□□ 0.21
CAPN1-223ENST00000533079 PAPPA2Q9BXP8 1791 aa16.33■□□□□ 0.21
CAPN1-223ENST00000533079 SOX10P56693 466 aa16.33■□□□□ 0.2
CAPN1-223ENST00000533079 TBC1D10BQ4KMP7 808 aaPredicted RBP16.33■□□□□ 0.2
CAPN1-223ENST00000533079 CTU1Q7Z7A3 348 aaKnown RBP16.33■□□□□ 0.2
CAPN1-223ENST00000533079 SULF1Q8IWU6 871 aa16.33■□□□□ 0.2
CAPN1-223ENST00000533079 EYA3Q99504 573 aa16.33■□□□□ 0.2
CAPN1-223ENST00000533079 ADM5C9JUS6 153 aa16.32■□□□□ 0.2
CAPN1-223ENST00000533079 TRPA1O75762 1119 aa16.32■□□□□ 0.2
CAPN1-223ENST00000533079 FKBP1BP68106 108 aa16.32■□□□□ 0.2
CAPN1-223ENST00000533079 TCIRG1Q13488 830 aa16.32■□□□□ 0.2
CAPN1-223ENST00000533079 KIF4BQ2VIQ3 1234 aa16.32■□□□□ 0.2
CAPN1-223ENST00000533079 THUMPD2Q9BTF0 503 aaKnown RBP16.32■□□□□ 0.2
CAPN1-223ENST00000533079 ECE2O60344 883 aa16.31■□□□□ 0.2
CAPN1-223ENST00000533079 EIF2S2P20042 333 aaKnown RBP16.31■□□□□ 0.2
CAPN1-223ENST00000533079 PKN2Q16513 984 aaKnown RBP16.31■□□□□ 0.2
CAPN1-223ENST00000533079 PROSER3Q2NL68 480 aa16.31■□□□□ 0.2
CAPN1-223ENST00000533079 DBNDD1Q9H9R9 158 aa16.31■□□□□ 0.2
CAPN1-223ENST00000533079 RTL9Q8NET4 1388 aa16.3■□□□□ 0.2
CAPN1-223ENST00000533079 EGFRP00533 1210 aa16.3■□□□□ 0.2
CAPN1-223ENST00000533079 COPS6Q7L5N1 327 aa16.3■□□□□ 0.2
CAPN1-223ENST00000533079 GGA3Q9NZ52 723 aa16.3■□□□□ 0.2
CAPN1-223ENST00000533079 NSFL1CQ9UNZ2 370 aaKnown RBP16.3■□□□□ 0.2
CAPN1-223ENST00000533079 TAF1P21675 1872 aa16.29■□□□□ 0.2
CAPN1-223ENST00000533079 LMOD3Q0VAK6 560 aa16.29■□□□□ 0.2
CAPN1-223ENST00000533079 SF3B3Q15393 1217 aaKnown RBP16.29■□□□□ 0.2
CAPN1-223ENST00000533079 RASAL3Q86YV0 1011 aa16.29■□□□□ 0.2
CAPN1-223ENST00000533079 XAGE3Q8WTP9 111 aa16.29■□□□□ 0.2
CAPN1-223ENST00000533079 CSRNP1Q96S65 589 aa16.29■□□□□ 0.2
CAPN1-223ENST00000533079 PSME4Q14997 1843 aa16.29■□□□□ 0.2
CAPN1-223ENST00000533079 PDE4DIPQ5VU43 2346 aa16.28■□□□□ 0.2
CAPN1-223ENST00000533079 PITPNM2Q9BZ72 1349 aa16.28■□□□□ 0.2
CAPN1-223ENST00000533079 C6orf229H3BNL8 230 aa16.28■□□□□ 0.2
CAPN1-223ENST00000533079 DLK2Q6UY11 383 aa16.28■□□□□ 0.2
CAPN1-223ENST00000533079 NECTIN2Q92692 538 aa16.28■□□□□ 0.2
CAPN1-223ENST00000533079 CDCA5Q96FF9 252 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms