RNA–Protein interactions for RNA: ENST00000532268.1

SRPRA-207, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 829 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-207ENST00000532268 ZBTB47Q9UFB7 747 aaPredicted RBP11.86□□□□□ -0.51
SRPRA-207ENST00000532268 GOLGB1Q14789 3259 aaKnown RBP11.86□□□□□ -0.51
SRPRA-207ENST00000532268 ABCC12Q96J65 1359 aa11.85□□□□□ -0.51
SRPRA-207ENST00000532268 IGHDP01880 384 aa11.85□□□□□ -0.51
SRPRA-207ENST00000532268 POLD1P28340 1107 aa11.85□□□□□ -0.51
SRPRA-207ENST00000532268 HDAC1Q13547 482 aaPredicted RBP11.85□□□□□ -0.51
SRPRA-207ENST00000532268 CCDC152Q4G0S7 254 aa11.85□□□□□ -0.51
SRPRA-207ENST00000532268 KAZALD1Q96I82 304 aa11.85□□□□□ -0.51
SRPRA-207ENST00000532268 PLA2G12BQ9BX93 195 aa11.85□□□□□ -0.51
SRPRA-207ENST00000532268 ANKRD18BA2A2Z9 1011 aa11.84□□□□□ -0.51
SRPRA-207ENST00000532268 SURF6O75683 361 aaKnown RBP11.84□□□□□ -0.51
SRPRA-207ENST00000532268 IFIT5Q13325 482 aaKnown RBP11.84□□□□□ -0.51
SRPRA-207ENST00000532268 FAM161AQ3B820 660 aa11.84□□□□□ -0.51
SRPRA-207ENST00000532268 CENPQQ7L2Z9 268 aaPredicted RBP11.84□□□□□ -0.51
SRPRA-207ENST00000532268 SIRT2Q8IXJ6 389 aa11.84□□□□□ -0.51
SRPRA-207ENST00000532268 TTLL11Q8NHH1 800 aa11.84□□□□□ -0.51
SRPRA-207ENST00000532268 SIL1Q9H173 461 aa11.84□□□□□ -0.51
SRPRA-207ENST00000532268 ITGA6P23229 1130 aa11.83□□□□□ -0.52
SRPRA-207ENST00000532268 G3BP1Q13283 466 aaKnown RBP eCLIP11.83□□□□□ -0.52
SRPRA-207ENST00000532268 MTX1Q13505 466 aa11.83□□□□□ -0.52
SRPRA-207ENST00000532268 RABL6Q3YEC7 729 aaPredicted RBP11.83□□□□□ -0.52
SRPRA-207ENST00000532268 SLC10A5Q5PT55 438 aa11.83□□□□□ -0.52
SRPRA-207ENST00000532268 KLHL34Q8N239 644 aa11.83□□□□□ -0.52
SRPRA-207ENST00000532268 SSH3Q8TE77 659 aa11.83□□□□□ -0.52
SRPRA-207ENST00000532268 RPGRQ92834 1020 aaKnown RBP11.83□□□□□ -0.52
SRPRA-207ENST00000532268 GREM2Q9H772 168 aa11.83□□□□□ -0.52
SRPRA-207ENST00000532268 PA2G4Q9UQ80 394 aaKnown RBP11.83□□□□□ -0.52
SRPRA-207ENST00000532268 EXOC6BQ9Y2D4 811 aa11.83□□□□□ -0.52
SRPRA-207ENST00000532268 C3orf67Q6ZVT6 689 aa11.82□□□□□ -0.52
SRPRA-207ENST00000532268 DDX46Q7L014 1031 aaKnown RBP11.82□□□□□ -0.52
SRPRA-207ENST00000532268 KLHDC4Q8TBB5 520 aa11.82□□□□□ -0.52
SRPRA-207ENST00000532268 CSF1RP07333 972 aa11.81□□□□□ -0.52
SRPRA-207ENST00000532268 PDE6BP35913 854 aa11.81□□□□□ -0.52
SRPRA-207ENST00000532268 IGHMBP2P38935 993 aaKnown RBP11.81□□□□□ -0.52
SRPRA-207ENST00000532268 POLA2Q14181 598 aa11.81□□□□□ -0.52
SRPRA-207ENST00000532268 HSP90AB4PQ58FF6 505 aa11.81□□□□□ -0.52
SRPRA-207ENST00000532268 ANKRD45Q5TZF3 282 aa11.81□□□□□ -0.52
SRPRA-207ENST00000532268 GCC1Q96CN9 775 aa11.81□□□□□ -0.52
SRPRA-207ENST00000532268 ZNF594Q96JF6 807 aaPredicted RBP11.81□□□□□ -0.52
SRPRA-207ENST00000532268 DCTPP1Q9H773 170 aa11.81□□□□□ -0.52
SRPRA-207ENST00000532268 CNNM1Q9NRU3 951 aa11.81□□□□□ -0.52
SRPRA-207ENST00000532268 UTRNP46939 3433 aa11.8□□□□□ -0.52
SRPRA-207ENST00000532268 SF3B3Q15393 1217 aaKnown RBP11.8□□□□□ -0.52
SRPRA-207ENST00000532268 CDC5LQ99459 802 aaKnown RBP11.8□□□□□ -0.52
SRPRA-207ENST00000532268 MPHOSPH8Q99549 860 aa11.8□□□□□ -0.52
SRPRA-207ENST00000532268 SYT17Q9BSW7 474 aa11.8□□□□□ -0.52
SRPRA-207ENST00000532268 BRIP1Q9BX63 1249 aa11.8□□□□□ -0.52
SRPRA-207ENST00000532268 SEC31BQ9NQW1 1179 aa11.8□□□□□ -0.52
SRPRA-207ENST00000532268 RAB11FIP3O75154 756 aa11.79□□□□□ -0.52
SRPRA-207ENST00000532268 RFX5P48382 616 aaPredicted RBP11.79□□□□□ -0.52
SRPRA-207ENST00000532268 LDHAL6AQ6ZMR3 332 aa11.79□□□□□ -0.52
SRPRA-207ENST00000532268 C2CD5Q86YS7 1000 aa11.79□□□□□ -0.52
SRPRA-207ENST00000532268 ERC1Q8IUD2 1116 aa11.79□□□□□ -0.52
SRPRA-207ENST00000532268 ANKRD18AQ8IVF6 992 aa11.79□□□□□ -0.52
SRPRA-207ENST00000532268 ZNF622Q969S3 477 aaKnown RBP eCLIP11.79□□□□□ -0.52
SRPRA-207ENST00000532268 RBM17Q96I25 401 aaKnown RBP11.79□□□□□ -0.52
SRPRA-207ENST00000532268 FHDC1Q9C0D6 1143 aaPredicted RBP11.79□□□□□ -0.52
SRPRA-207ENST00000532268 COPRSQ9NQ92 184 aa11.79□□□□□ -0.52
SRPRA-207ENST00000532268 DDX60Q8IY21 1712 aaKnown RBP11.79□□□□□ -0.52
SRPRA-207ENST00000532268 KDM2BQ8NHM5 1336 aa11.79□□□□□ -0.52
SRPRA-207ENST00000532268 LAMB2P55268 1798 aa11.78□□□□□ -0.52
SRPRA-207ENST00000532268 H0YIN7 160 aa11.78□□□□□ -0.52
SRPRA-207ENST00000532268 PTPN12Q05209 780 aaKnown RBP11.78□□□□□ -0.52
SRPRA-207ENST00000532268 SMC5Q8IY18 1101 aa11.78□□□□□ -0.52
SRPRA-207ENST00000532268 LRRCC1Q9C099 1032 aa11.78□□□□□ -0.52
SRPRA-207ENST00000532268 MYH3P11055 1940 aa11.78□□□□□ -0.52
SRPRA-207ENST00000532268 RIC1Q4ADV7 1423 aa11.77□□□□□ -0.52
SRPRA-207ENST00000532268 EYA2O00167 538 aa11.77□□□□□ -0.53
SRPRA-207ENST00000532268 SMARCA5O60264 1052 aaPredicted RBP11.77□□□□□ -0.53
SRPRA-207ENST00000532268 METTL24Q5JXM2 366 aa11.77□□□□□ -0.53
SRPRA-207ENST00000532268 KIF1BPQ96EK5 621 aa11.77□□□□□ -0.53
SRPRA-207ENST00000532268 PUS3Q9BZE2 481 aaKnown RBP11.77□□□□□ -0.53
SRPRA-207ENST00000532268 LNPKQ9C0E8 428 aa11.77□□□□□ -0.53
SRPRA-207ENST00000532268 PDZRN3Q9UPQ7 1066 aa11.77□□□□□ -0.53
SRPRA-207ENST00000532268 NOP58Q9Y2X3 529 aaKnown RBP11.77□□□□□ -0.53
SRPRA-207ENST00000532268 TNRC6CQ9HCJ0 1690 aaKnown RBP11.77□□□□□ -0.53
SRPRA-207ENST00000532268 RTL9Q8NET4 1388 aa11.77□□□□□ -0.53
SRPRA-207ENST00000532268 DCAF8L1A6NGE4 600 aa11.76□□□□□ -0.53
SRPRA-207ENST00000532268 NPR1P16066 1061 aa11.76□□□□□ -0.53
SRPRA-207ENST00000532268 IL15P40933 162 aaPredicted RBP11.76□□□□□ -0.53
SRPRA-207ENST00000532268 RPS8P62241 208 aaKnown RBP11.76□□□□□ -0.53
SRPRA-207ENST00000532268 GRAPQ13588 217 aa11.76□□□□□ -0.53
SRPRA-207ENST00000532268 LRRC24Q50LG9 513 aa11.76□□□□□ -0.53
SRPRA-207ENST00000532268 GRAPLQ8TC17 118 aaPredicted RBP11.76□□□□□ -0.53
SRPRA-207ENST00000532268 RHPN1Q8TCX5 695 aa11.76□□□□□ -0.53
SRPRA-207ENST00000532268 CELF1Q92879 486 aaKnown RBP11.76□□□□□ -0.53
SRPRA-207ENST00000532268 TMX4Q9H1E5 349 aaPredicted RBP11.76□□□□□ -0.53
SRPRA-207ENST00000532268 IL1RAPL2Q9NP60 686 aa11.76□□□□□ -0.53
SRPRA-207ENST00000532268 CEP126Q9P2H0 1117 aa11.76□□□□□ -0.53
SRPRA-207ENST00000532268 CD2APQ9Y5K6 639 aa11.76□□□□□ -0.53
SRPRA-207ENST00000532268 CIAO1O76071 339 aa11.75□□□□□ -0.53
SRPRA-207ENST00000532268 CHRNA5P30532 468 aa11.75□□□□□ -0.53
SRPRA-207ENST00000532268 ALDH1B1P30837 517 aa11.75□□□□□ -0.53
SRPRA-207ENST00000532268 RGS3P49796 1198 aa11.75□□□□□ -0.53
SRPRA-207ENST00000532268 NUCB1Q02818 461 aa11.75□□□□□ -0.53
SRPRA-207ENST00000532268 TFCP2Q12800 502 aa11.75□□□□□ -0.53
SRPRA-207ENST00000532268 CRY2Q49AN0 593 aa11.75□□□□□ -0.53
SRPRA-207ENST00000532268 CHD1LQ86WJ1 897 aa11.75□□□□□ -0.53
SRPRA-207ENST00000532268 CLASRPQ8N2M8 674 aaKnown RBP11.75□□□□□ -0.53
SRPRA-207ENST00000532268 MASTLQ96GX5 879 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms