RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 PARP10Q53GL7 1025 aa14.88□□□□□ -0.03
CHD7-211ENST00000532149 LMBR1LQ6UX01 489 aa14.88□□□□□ -0.03
CHD7-211ENST00000532149 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.88□□□□□ -0.03
CHD7-211ENST00000532149 OTUD5Q96G74 571 aa14.88□□□□□ -0.03
CHD7-211ENST00000532149 SNRKQ9NRH2 765 aa14.88□□□□□ -0.03
CHD7-211ENST00000532149 ATP5J2-PTCD1G3V325 749 aa14.87□□□□□ -0.03
CHD7-211ENST00000532149 SGSM2O43147 1006 aa14.87□□□□□ -0.03
CHD7-211ENST00000532149 PDIA4P13667 645 aaKnown RBP14.87□□□□□ -0.03
CHD7-211ENST00000532149 CCDC57Q2TAC2 916 aa14.87□□□□□ -0.03
CHD7-211ENST00000532149 ABCC12Q96J65 1359 aa14.86□□□□□ -0.03
CHD7-211ENST00000532149 EYA2O00167 538 aa14.86□□□□□ -0.03
CHD7-211ENST00000532149 CSF1RP07333 972 aa14.86□□□□□ -0.03
CHD7-211ENST00000532149 PIP4K2BP78356 416 aa14.86□□□□□ -0.03
CHD7-211ENST00000532149 TNNI3KQ59H18 835 aa14.86□□□□□ -0.03
CHD7-211ENST00000532149 CLEC4GQ6UXB4 293 aa14.86□□□□□ -0.03
CHD7-211ENST00000532149 NGLY1Q96IV0 654 aa14.86□□□□□ -0.03
CHD7-211ENST00000532149 ZNF652Q9Y2D9 606 aa14.86□□□□□ -0.03
CHD7-211ENST00000532149 CCDC9Q9Y3X0 531 aaKnown RBP14.86□□□□□ -0.03
CHD7-211ENST00000532149 FPGT-TNNI3KV9GXZ4 949 aa14.86□□□□□ -0.03
CHD7-211ENST00000532149 DOT1LQ8TEK3 1739 aa14.86□□□□□ -0.03
CHD7-211ENST00000532149 SLC4A3P48751 1232 aa14.85□□□□□ -0.03
CHD7-211ENST00000532149 EIF5P55010 431 aaKnown RBP14.85□□□□□ -0.03
CHD7-211ENST00000532149 EAF2Q96CJ1 260 aaPredicted RBP14.85□□□□□ -0.03
CHD7-211ENST00000532149 ZBTB3Q9H5J0 574 aa14.85□□□□□ -0.03
CHD7-211ENST00000532149 ANO2Q9NQ90 1003 aa14.85□□□□□ -0.03
CHD7-211ENST00000532149 CCDC87Q9NVE4 849 aa14.85□□□□□ -0.03
CHD7-211ENST00000532149 PA2G4Q9UQ80 394 aaKnown RBP14.85□□□□□ -0.03
CHD7-211ENST00000532149 ANKRD36CQ5JPF3 1778 aa14.85□□□□□ -0.03
CHD7-211ENST00000532149 RREB1Q92766 1687 aa14.84□□□□□ -0.03
CHD7-211ENST00000532149 NUTM2BA6NNL0 878 aaPredicted RBP14.84□□□□□ -0.03
CHD7-211ENST00000532149 NUTM2EB1AL46 878 aaPredicted RBP14.84□□□□□ -0.03
CHD7-211ENST00000532149 HSPA4P34932 840 aa14.84□□□□□ -0.03
CHD7-211ENST00000532149 ATN1P54259 1190 aaPredicted RBP14.84□□□□□ -0.03
CHD7-211ENST00000532149 NUCB2P80303 420 aa14.84□□□□□ -0.03
CHD7-211ENST00000532149 NFKBIBQ15653 356 aa14.84□□□□□ -0.03
CHD7-211ENST00000532149 EPHA10Q5JZY3 1008 aa14.84□□□□□ -0.03
CHD7-211ENST00000532149 RNF20Q5VTR2 975 aa14.84□□□□□ -0.03
CHD7-211ENST00000532149 NUTM2AQ8IVF1 878 aaPredicted RBP14.84□□□□□ -0.03
CHD7-211ENST00000532149 MARCH10Q8NA82 808 aaPredicted RBP14.84□□□□□ -0.03
CHD7-211ENST00000532149 SYTL4Q96C24 671 aaPredicted RBP14.84□□□□□ -0.03
CHD7-211ENST00000532149 CEP126Q9P2H0 1117 aa14.84□□□□□ -0.03
CHD7-211ENST00000532149 SPEF2Q9C093 1822 aa14.84□□□□□ -0.03
CHD7-211ENST00000532149 KAT6BQ8WYB5 2073 aa14.83□□□□□ -0.03
CHD7-211ENST00000532149 LOC102724428A0A0B4J2F2 783 aa14.83□□□□□ -0.04
CHD7-211ENST00000532149 SIK1P57059 783 aa14.83□□□□□ -0.04
CHD7-211ENST00000532149 IFIT5Q13325 482 aaKnown RBP14.83□□□□□ -0.04
CHD7-211ENST00000532149 NLRP10Q86W26 655 aa14.83□□□□□ -0.04
CHD7-211ENST00000532149 DZIP3Q86Y13 1208 aaKnown RBP14.83□□□□□ -0.04
CHD7-211ENST00000532149 TM6SF1Q9BZW5 370 aa14.83□□□□□ -0.04
CHD7-211ENST00000532149 TJP1Q07157 1748 aa14.83□□□□□ -0.04
CHD7-211ENST00000532149 BCL9LQ86UU0 1499 aa14.82□□□□□ -0.04
CHD7-211ENST00000532149 PDE8AO60658 829 aa14.82□□□□□ -0.04
CHD7-211ENST00000532149 ZKSCAN1P17029 563 aaPredicted RBP14.82□□□□□ -0.04
CHD7-211ENST00000532149 ATP6V1AP38606 617 aa14.82□□□□□ -0.04
CHD7-211ENST00000532149 RC3H1Q5TC82 1133 aaKnown RBP14.82□□□□□ -0.04
CHD7-211ENST00000532149 INTS4Q96HW7 963 aaKnown RBP14.82□□□□□ -0.04
CHD7-211ENST00000532149 GBP4Q96PP9 640 aa14.82□□□□□ -0.04
CHD7-211ENST00000532149 HAUS7Q99871 368 aa14.82□□□□□ -0.04
CHD7-211ENST00000532149 POTEJP0CG39 1038 aa14.81□□□□□ -0.04
CHD7-211ENST00000532149 DDIT3P35638 169 aa14.81□□□□□ -0.04
CHD7-211ENST00000532149 TAF7LQ5H9L4 462 aa14.81□□□□□ -0.04
CHD7-211ENST00000532149 ZNF34Q8IZ26 560 aa14.81□□□□□ -0.04
CHD7-211ENST00000532149 KCNB2Q92953 911 aa14.81□□□□□ -0.04
CHD7-211ENST00000532149 BCL11AQ9H165 835 aa14.81□□□□□ -0.04
CHD7-211ENST00000532149 BMP2KQ9NSY1 1161 aaPredicted RBP14.81□□□□□ -0.04
CHD7-211ENST00000532149 HMG20BQ9P0W2 317 aa14.81□□□□□ -0.04
CHD7-211ENST00000532149 METRNQ9UJH8 293 aa14.81□□□□□ -0.04
CHD7-211ENST00000532149 ANKRD18BA2A2Z9 1011 aa14.8□□□□□ -0.04
CHD7-211ENST00000532149 DDX11L8A8MPP1 907 aa14.8□□□□□ -0.04
CHD7-211ENST00000532149 PSMA5P28066 241 aa14.8□□□□□ -0.04
CHD7-211ENST00000532149 PIP4K2AP48426 406 aaPredicted RBP14.8□□□□□ -0.04
CHD7-211ENST00000532149 TFCP2Q12800 502 aa14.8□□□□□ -0.04
CHD7-211ENST00000532149 CCDC158Q5M9N0 1113 aa14.8□□□□□ -0.04
CHD7-211ENST00000532149 CERKQ8TCT0 537 aa14.8□□□□□ -0.04
CHD7-211ENST00000532149 ZNF512BQ96KM6 892 aaPredicted RBP14.8□□□□□ -0.04
CHD7-211ENST00000532149 SIL1Q9H173 461 aa14.8□□□□□ -0.04
CHD7-211ENST00000532149 CHMP3Q9Y3E7 222 aa14.8□□□□□ -0.04
CHD7-211ENST00000532149 RTL9Q8NET4 1388 aa14.8□□□□□ -0.04
CHD7-211ENST00000532149 PALLDQ8WX93 1383 aa14.8□□□□□ -0.04
CHD7-211ENST00000532149 NUP98P52948 1817 aa14.8□□□□□ -0.04
CHD7-211ENST00000532149 ZFYP08048 801 aaPredicted RBP14.79□□□□□ -0.04
CHD7-211ENST00000532149 KRT32Q14532 448 aa14.79□□□□□ -0.04
CHD7-211ENST00000532149 NBR1Q14596 966 aa14.79□□□□□ -0.04
CHD7-211ENST00000532149 CLEC17AQ6ZS10 378 aa14.79□□□□□ -0.04
CHD7-211ENST00000532149 ATG9AQ7Z3C6 839 aa14.79□□□□□ -0.04
CHD7-211ENST00000532149 CHMP4CQ96CF2 233 aa14.79□□□□□ -0.04
CHD7-211ENST00000532149 SLC4A9Q96Q91 983 aa14.79□□□□□ -0.04
CHD7-211ENST00000532149 FSD1Q9BTV5 496 aa14.79□□□□□ -0.04
CHD7-211ENST00000532149 CNTNAP4Q9C0A0 1308 aa14.79□□□□□ -0.04
CHD7-211ENST00000532149 CCDC8Q9H0W5 538 aaPredicted RBP14.79□□□□□ -0.04
CHD7-211ENST00000532149 SLKQ9H2G2 1235 aaPredicted RBP14.79□□□□□ -0.04
CHD7-211ENST00000532149 USP21Q9UK80 565 aa14.79□□□□□ -0.04
CHD7-211ENST00000532149 ZBTB1Q9Y2K1 713 aa14.79□□□□□ -0.04
CHD7-211ENST00000532149 MYH3P11055 1940 aa14.78□□□□□ -0.04
CHD7-211ENST00000532149 SH3TC1Q8TE82 1336 aa14.78□□□□□ -0.04
CHD7-211ENST00000532149 GOLGA6L22H0YM25 854 aa14.78□□□□□ -0.04
CHD7-211ENST00000532149 ONECUT3O60422 494 aaPredicted RBP14.78□□□□□ -0.04
CHD7-211ENST00000532149 CRKLP46109 303 aaKnown RBP14.78□□□□□ -0.04
CHD7-211ENST00000532149 CTSWP56202 376 aa14.78□□□□□ -0.04
CHD7-211ENST00000532149 TSGA10IPQ3SY00 556 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms