RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 TRIM35Q9UPQ4 493 aa19.83■□□□□ 0.77
DEPDC7-204ENST00000532078 LAS1LQ9Y4W2 734 aaKnown RBP19.83■□□□□ 0.77
DEPDC7-204ENST00000532078 ADAMTSL1Q8N6G6 1762 aa19.83■□□□□ 0.76
DEPDC7-204ENST00000532078 COL4A5P29400 1685 aa19.82■□□□□ 0.76
DEPDC7-204ENST00000532078 EPHX2P34913 555 aa19.82■□□□□ 0.76
DEPDC7-204ENST00000532078 EIF6P56537 245 aaKnown RBP19.82■□□□□ 0.76
DEPDC7-204ENST00000532078 AIMP1Q12904 312 aaKnown RBP19.82■□□□□ 0.76
DEPDC7-204ENST00000532078 EAPPQ56P03 285 aaPredicted RBP19.82■□□□□ 0.76
DEPDC7-204ENST00000532078 SLC10A5Q5PT55 438 aa19.82■□□□□ 0.76
DEPDC7-204ENST00000532078 LAMB2P55268 1798 aa19.81■□□□□ 0.76
DEPDC7-204ENST00000532078 HOXB7P09629 217 aa19.81■□□□□ 0.76
DEPDC7-204ENST00000532078 KRT24Q2M2I5 525 aa19.81■□□□□ 0.76
DEPDC7-204ENST00000532078 PNMA8AQ86V59 439 aaPredicted RBP19.81■□□□□ 0.76
DEPDC7-204ENST00000532078 NLRP10Q86W26 655 aa19.81■□□□□ 0.76
DEPDC7-204ENST00000532078 LARGE2Q8N3Y3 721 aa19.81■□□□□ 0.76
DEPDC7-204ENST00000532078 ADAMTS8Q9UP79 889 aa19.81■□□□□ 0.76
DEPDC7-204ENST00000532078 PASKQ96RG2 1323 aa19.8■□□□□ 0.76
DEPDC7-204ENST00000532078 TCERG1O14776 1098 aaKnown RBP19.8■□□□□ 0.76
DEPDC7-204ENST00000532078 HDGFL1Q5TGJ6 251 aa19.8■□□□□ 0.76
DEPDC7-204ENST00000532078 ATP6V0A2Q9Y487 856 aa19.8■□□□□ 0.76
DEPDC7-204ENST00000532078 ABCC4O15439 1325 aa19.79■□□□□ 0.76
DEPDC7-204ENST00000532078 TCIRG1Q13488 830 aa19.79■□□□□ 0.76
DEPDC7-204ENST00000532078 CHPF2Q9P2E5 772 aa19.79■□□□□ 0.76
DEPDC7-204ENST00000532078 HSPA1AP0DMV8 641 aaKnown RBP19.78■□□□□ 0.76
DEPDC7-204ENST00000532078 HSPA1BP0DMV9 641 aaKnown RBP19.78■□□□□ 0.76
DEPDC7-204ENST00000532078 LMOD1P29536 600 aaPredicted RBP19.78■□□□□ 0.76
DEPDC7-204ENST00000532078 SLC51AQ86UW1 340 aa19.78■□□□□ 0.76
DEPDC7-204ENST00000532078 NIM1KQ8IY84 436 aa19.78■□□□□ 0.76
DEPDC7-204ENST00000532078 PRKRIP1Q9H875 184 aaPredicted RBP19.78■□□□□ 0.76
DEPDC7-204ENST00000532078 TRMT112Q9UI30 125 aaKnown RBP19.78■□□□□ 0.76
DEPDC7-204ENST00000532078 GJA3Q9Y6H8 435 aa19.78■□□□□ 0.76
DEPDC7-204ENST00000532078 SH3TC1Q8TE82 1336 aa19.77■□□□□ 0.76
DEPDC7-204ENST00000532078 PPIP5K2O43314 1243 aa19.77■□□□□ 0.76
DEPDC7-204ENST00000532078 CFAP44Q96MT7 982 aa19.77■□□□□ 0.76
DEPDC7-204ENST00000532078 VPS33BQ9H267 617 aa19.77■□□□□ 0.76
DEPDC7-204ENST00000532078 DBF4Q9UBU7 674 aaPredicted RBP19.77■□□□□ 0.76
DEPDC7-204ENST00000532078 MKRN1Q9UHC7 482 aaKnown RBP19.77■□□□□ 0.76
DEPDC7-204ENST00000532078 CIZ1Q9ULV3 898 aaPredicted RBP19.77■□□□□ 0.76
DEPDC7-204ENST00000532078 CNTNAP1P78357 1384 aa19.76■□□□□ 0.75
DEPDC7-204ENST00000532078 BBOX1O75936 387 aa19.76■□□□□ 0.75
DEPDC7-204ENST00000532078 ITGBL1O95965 494 aaPredicted RBP19.76■□□□□ 0.75
DEPDC7-204ENST00000532078 HCLS1P14317 486 aaPredicted RBP19.76■□□□□ 0.75
DEPDC7-204ENST00000532078 COL13A1Q5TAT6 717 aaPredicted RBP19.76■□□□□ 0.75
DEPDC7-204ENST00000532078 SUPT20HQ8NEM7 779 aa19.76■□□□□ 0.75
DEPDC7-204ENST00000532078 PLBD2Q8NHP8 589 aa19.76■□□□□ 0.75
DEPDC7-204ENST00000532078 TMEM88BA6NKF7 163 aa19.75■□□□□ 0.75
DEPDC7-204ENST00000532078 DDX46Q7L014 1031 aaKnown RBP19.75■□□□□ 0.75
DEPDC7-204ENST00000532078 KIF12Q96FN5 646 aa19.75■□□□□ 0.75
DEPDC7-204ENST00000532078 LTBP1Q14766 1721 aa19.75■□□□□ 0.75
DEPDC7-204ENST00000532078 AOC3Q16853 763 aa19.74■□□□□ 0.75
DEPDC7-204ENST00000532078 DPP8Q6V1X1 898 aaPredicted RBP19.74■□□□□ 0.75
DEPDC7-204ENST00000532078 RTFDC1Q9BY42 306 aaPredicted RBP19.74■□□□□ 0.75
DEPDC7-204ENST00000532078 HYPKQ9NX55 129 aa19.74■□□□□ 0.75
DEPDC7-204ENST00000532078 DDX60Q8IY21 1712 aaKnown RBP19.73■□□□□ 0.75
DEPDC7-204ENST00000532078 SCNN1DP51172 638 aa19.73■□□□□ 0.75
DEPDC7-204ENST00000532078 CALD1Q05682 793 aaKnown RBP19.73■□□□□ 0.75
DEPDC7-204ENST00000532078 GRAPQ13588 217 aa19.73■□□□□ 0.75
DEPDC7-204ENST00000532078 DUSP27Q5VZP5 1158 aa19.73■□□□□ 0.75
DEPDC7-204ENST00000532078 MAP1SQ66K74 1059 aaPredicted RBP19.73■□□□□ 0.75
DEPDC7-204ENST00000532078 ANKRD13DQ6ZTN6 518 aa19.73■□□□□ 0.75
DEPDC7-204ENST00000532078 SP8Q8IXZ3 490 aa19.73■□□□□ 0.75
DEPDC7-204ENST00000532078 CNTROBQ8N137 903 aa19.73■□□□□ 0.75
DEPDC7-204ENST00000532078 GRAPLQ8TC17 118 aaPredicted RBP19.73■□□□□ 0.75
DEPDC7-204ENST00000532078 MBIPQ9NS73 344 aa19.73■□□□□ 0.75
DEPDC7-204ENST00000532078 LRRC37AA6NMS7 1700 aa19.73■□□□□ 0.75
DEPDC7-204ENST00000532078 TMC4Q7Z404 712 aa19.72■□□□□ 0.75
DEPDC7-204ENST00000532078 MPNDQ8N594 471 aa19.72■□□□□ 0.75
DEPDC7-204ENST00000532078 ISCA1Q9BUE6 129 aa19.71■□□□□ 0.75
DEPDC7-204ENST00000532078 IFT57Q9NWB7 429 aa19.71■□□□□ 0.75
DEPDC7-204ENST00000532078 ZNRF3Q9ULT6 936 aa19.71■□□□□ 0.75
DEPDC7-204ENST00000532078 GALR2O43603 387 aaPredicted RBP19.7■□□□□ 0.74
DEPDC7-204ENST00000532078 ZNF853P0CG23 659 aa19.7■□□□□ 0.74
DEPDC7-204ENST00000532078 EPS15P42566 896 aa19.7■□□□□ 0.74
DEPDC7-204ENST00000532078 GNAI1P63096 354 aa19.7■□□□□ 0.74
DEPDC7-204ENST00000532078 USP50Q70EL3 339 aaPredicted RBP19.7■□□□□ 0.74
DEPDC7-204ENST00000532078 TNS4Q8IZW8 715 aa19.7■□□□□ 0.74
DEPDC7-204ENST00000532078 APAF1O14727 1248 aa19.69■□□□□ 0.74
DEPDC7-204ENST00000532078 KIAA2012Q0VF49 1180 aa19.69■□□□□ 0.74
DEPDC7-204ENST00000532078 DUOX1Q9NRD9 1551 aa19.69■□□□□ 0.74
DEPDC7-204ENST00000532078 ATP5J2-PTCD1G3V325 749 aa19.68■□□□□ 0.74
DEPDC7-204ENST00000532078 MAP3K13O43283 966 aa19.68■□□□□ 0.74
DEPDC7-204ENST00000532078 PYGBP11216 843 aa19.68■□□□□ 0.74
DEPDC7-204ENST00000532078 GOLGA2Q08379 1002 aa19.68■□□□□ 0.74
DEPDC7-204ENST00000532078 ZNF428Q96B54 188 aa19.68■□□□□ 0.74
DEPDC7-204ENST00000532078 FAM89AQ96GI7 184 aa19.68■□□□□ 0.74
DEPDC7-204ENST00000532078 MS4A3Q96HJ5 214 aa19.68■□□□□ 0.74
DEPDC7-204ENST00000532078 GPRC5DQ9NZD1 345 aa19.68■□□□□ 0.74
DEPDC7-204ENST00000532078 TAF1P21675 1872 aa19.68■□□□□ 0.74
DEPDC7-204ENST00000532078 CDHR2Q9BYE9 1310 aa19.68■□□□□ 0.74
DEPDC7-204ENST00000532078 VEGFBP49765 207 aa19.67■□□□□ 0.74
DEPDC7-204ENST00000532078 CXCL9Q07325 125 aa19.67■□□□□ 0.74
DEPDC7-204ENST00000532078 TRIM28Q13263 835 aaKnown RBP19.67■□□□□ 0.74
DEPDC7-204ENST00000532078 ADARB2Q9NS39 739 aaKnown RBP19.67■□□□□ 0.74
DEPDC7-204ENST00000532078 RASSF10A6NK89 507 aa19.66■□□□□ 0.74
DEPDC7-204ENST00000532078 SF3B3Q15393 1217 aaKnown RBP19.66■□□□□ 0.74
DEPDC7-204ENST00000532078 CIAPIN1Q6FI81 312 aa19.66■□□□□ 0.74
DEPDC7-204ENST00000532078 RIC3Q7Z5B4 369 aa19.66■□□□□ 0.74
DEPDC7-204ENST00000532078 GMPSP49915 693 aaPredicted RBP19.65■□□□□ 0.74
DEPDC7-204ENST00000532078 TNIP1Q15025 636 aa19.65■□□□□ 0.74
DEPDC7-204ENST00000532078 CHMP4AQ9BY43 222 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms