RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 DPP8Q6V1X1 898 aaPredicted RBP18.88■□□□□ 0.61
CTSB-221ENST00000531502 PGAP2Q9UHJ9 254 aa18.88■□□□□ 0.61
CTSB-221ENST00000531502 DUOX1Q9NRD9 1551 aa18.88■□□□□ 0.61
CTSB-221ENST00000531502 GRAPQ13588 217 aa18.87■□□□□ 0.61
CTSB-221ENST00000531502 RALBP1Q15311 655 aa18.87■□□□□ 0.61
CTSB-221ENST00000531502 MPNDQ8N594 471 aa18.87■□□□□ 0.61
CTSB-221ENST00000531502 GRAPLQ8TC17 118 aaPredicted RBP18.87■□□□□ 0.61
CTSB-221ENST00000531502 SH3TC1Q8TE82 1336 aa18.87■□□□□ 0.61
CTSB-221ENST00000531502 TRMT112Q9UI30 125 aaKnown RBP18.87■□□□□ 0.61
CTSB-221ENST00000531502 LRRC37AA6NMS7 1700 aa18.86■□□□□ 0.61
CTSB-221ENST00000531502 DDX60Q8IY21 1712 aaKnown RBP18.86■□□□□ 0.61
CTSB-221ENST00000531502 CDHR2Q9BYE9 1310 aa18.86■□□□□ 0.61
CTSB-221ENST00000531502 YDJCA8MPS7 323 aa18.86■□□□□ 0.61
CTSB-221ENST00000531502 ECE1P42892 770 aa18.86■□□□□ 0.61
CTSB-221ENST00000531502 HIRAP54198 1017 aaPredicted RBP18.86■□□□□ 0.61
CTSB-221ENST00000531502 CIAPIN1Q6FI81 312 aa18.86■□□□□ 0.61
CTSB-221ENST00000531502 DDX46Q7L014 1031 aaKnown RBP18.86■□□□□ 0.61
CTSB-221ENST00000531502 GPR101Q96P66 508 aaPredicted RBP18.86■□□□□ 0.61
CTSB-221ENST00000531502 TRIM35Q9UPQ4 493 aa18.85■□□□□ 0.61
CTSB-221ENST00000531502 RAD17O75943 681 aa18.84■□□□□ 0.61
CTSB-221ENST00000531502 SAPCD2Q86UD0 394 aa18.84■□□□□ 0.61
CTSB-221ENST00000531502 ABHD8Q96I13 439 aa18.84■□□□□ 0.61
CTSB-221ENST00000531502 GLIS2Q9BZE0 524 aaPredicted RBP18.84■□□□□ 0.61
CTSB-221ENST00000531502 CHPF2Q9P2E5 772 aa18.84■□□□□ 0.61
CTSB-221ENST00000531502 PAXIP1Q6ZW49 1069 aaPredicted RBP18.83■□□□□ 0.6
CTSB-221ENST00000531502 CCDC146Q8IYE0 955 aa18.83■□□□□ 0.6
CTSB-221ENST00000531502 TRPM4Q8TD43 1214 aa18.83■□□□□ 0.6
CTSB-221ENST00000531502 ZC3H15Q8WU90 426 aaKnown RBP18.83■□□□□ 0.6
CTSB-221ENST00000531502 ZNF428Q96B54 188 aa18.83■□□□□ 0.6
CTSB-221ENST00000531502 ISCA1Q9BUE6 129 aa18.83■□□□□ 0.6
CTSB-221ENST00000531502 COL4A1P02462 1669 aa18.82■□□□□ 0.6
CTSB-221ENST00000531502 SHTN1A0MZ66 631 aa18.82■□□□□ 0.6
CTSB-221ENST00000531502 AOC2O75106 756 aa18.82■□□□□ 0.6
CTSB-221ENST00000531502 CELF2O95319 508 aaKnown RBP18.82■□□□□ 0.6
CTSB-221ENST00000531502 MAP2K2P36507 400 aa18.82■□□□□ 0.6
CTSB-221ENST00000531502 GRM1Q13255 1194 aa18.82■□□□□ 0.6
CTSB-221ENST00000531502 TNIP1Q15025 636 aa18.82■□□□□ 0.6
CTSB-221ENST00000531502 NEUROD2Q15784 382 aa18.82■□□□□ 0.6
CTSB-221ENST00000531502 TMC4Q7Z404 712 aa18.82■□□□□ 0.6
CTSB-221ENST00000531502 PLBD2Q8NHP8 589 aa18.82■□□□□ 0.6
CTSB-221ENST00000531502 HHIPL1Q96JK4 782 aa18.82■□□□□ 0.6
CTSB-221ENST00000531502 HOXB7P09629 217 aa18.81■□□□□ 0.6
CTSB-221ENST00000531502 SF3B3Q15393 1217 aaKnown RBP18.81■□□□□ 0.6
CTSB-221ENST00000531502 ANKRD13DQ6ZTN6 518 aa18.81■□□□□ 0.6
CTSB-221ENST00000531502 BCL2L13Q9BXK5 485 aa18.81■□□□□ 0.6
CTSB-221ENST00000531502 CNOT7Q9UIV1 285 aaKnown RBP18.81■□□□□ 0.6
CTSB-221ENST00000531502 HDGFL1Q5TGJ6 251 aa18.8■□□□□ 0.6
CTSB-221ENST00000531502 CELF1Q92879 486 aaKnown RBP18.8■□□□□ 0.6
CTSB-221ENST00000531502 RUNDC1Q96C34 613 aa18.8■□□□□ 0.6
CTSB-221ENST00000531502 MYBBP1AQ9BQG0 1328 aaKnown RBP18.79■□□□□ 0.6
CTSB-221ENST00000531502 FAM89AQ96GI7 184 aa18.79■□□□□ 0.6
CTSB-221ENST00000531502 BEGAINQ9BUH8 593 aa18.79■□□□□ 0.6
CTSB-221ENST00000531502 LAS1LQ9Y4W2 734 aaKnown RBP18.79■□□□□ 0.6
CTSB-221ENST00000531502 ATP5J2-PTCD1G3V325 749 aa18.78■□□□□ 0.6
CTSB-221ENST00000531502 CDC37L1Q7L3B6 337 aa18.78■□□□□ 0.6
CTSB-221ENST00000531502 MICALL2Q8IY33 904 aa18.78■□□□□ 0.6
CTSB-221ENST00000531502 DPF2Q92785 391 aa18.78■□□□□ 0.6
CTSB-221ENST00000531502 DBF4Q9UBU7 674 aaPredicted RBP18.78■□□□□ 0.6
CTSB-221ENST00000531502 POLLQ9UGP5 575 aa18.78■□□□□ 0.6
CTSB-221ENST00000531502 ZBTB12Q9Y330 459 aaPredicted RBP18.78■□□□□ 0.6
CTSB-221ENST00000531502 H7C1D1 291 aa18.77■□□□□ 0.6
CTSB-221ENST00000531502 PSMD14O00487 310 aa18.77■□□□□ 0.6
CTSB-221ENST00000531502 TRIM28Q13263 835 aaKnown RBP18.77■□□□□ 0.6
CTSB-221ENST00000531502 WASHC4Q2M389 1173 aa18.77■□□□□ 0.6
CTSB-221ENST00000531502 TSKSQ9UJT2 592 aa18.77■□□□□ 0.6
CTSB-221ENST00000531502 NSFL1CQ9UNZ2 370 aaKnown RBP18.77■□□□□ 0.6
CTSB-221ENST00000531502 GPSM2P81274 684 aa18.76■□□□□ 0.59
CTSB-221ENST00000531502 DLK2Q6UY11 383 aa18.76■□□□□ 0.59
CTSB-221ENST00000531502 CFAP44Q96MT7 982 aa18.76■□□□□ 0.59
CTSB-221ENST00000531502 DBNDD1Q9H9R9 158 aa18.76■□□□□ 0.59
CTSB-221ENST00000531502 ADAMTS8Q9UP79 889 aa18.76■□□□□ 0.59
CTSB-221ENST00000531502 POLR2AP24928 1970 aaKnown RBP18.75■□□□□ 0.59
CTSB-221ENST00000531502 EGFRP00533 1210 aa18.75■□□□□ 0.59
CTSB-221ENST00000531502 BRPF1P55201 1214 aaPredicted RBP18.75■□□□□ 0.59
CTSB-221ENST00000531502 DUSP27Q5VZP5 1158 aa18.75■□□□□ 0.59
CTSB-221ENST00000531502 SAMD7Q7Z3H4 446 aa18.75■□□□□ 0.59
CTSB-221ENST00000531502 USP48Q86UV5 1035 aa18.75■□□□□ 0.59
CTSB-221ENST00000531502 ZNF408Q9H9D4 720 aa18.75■□□□□ 0.59
CTSB-221ENST00000531502 KCNQ5Q9NR82 932 aa18.75■□□□□ 0.59
CTSB-221ENST00000531502 HYPKQ9NX55 129 aa18.75■□□□□ 0.59
CTSB-221ENST00000531502 RTL9Q8NET4 1388 aa18.75■□□□□ 0.59
CTSB-221ENST00000531502 RIMBP2O15034 1052 aa18.74■□□□□ 0.59
CTSB-221ENST00000531502 CA12O43570 354 aa18.74■□□□□ 0.59
CTSB-221ENST00000531502 ZNF853P0CG23 659 aa18.74■□□□□ 0.59
CTSB-221ENST00000531502 DDX10Q13206 875 aaKnown RBP18.74■□□□□ 0.59
CTSB-221ENST00000531502 RTL5Q5HYW3 569 aaPredicted RBP18.74■□□□□ 0.59
CTSB-221ENST00000531502 ZIC5Q96T25 663 aa18.74■□□□□ 0.59
CTSB-221ENST00000531502 SCN9AQ15858 1988 aa18.73■□□□□ 0.59
CTSB-221ENST00000531502 C6orf229H3BNL8 230 aa18.73■□□□□ 0.59
CTSB-221ENST00000531502 IRS4O14654 1257 aaPredicted RBP18.73■□□□□ 0.59
CTSB-221ENST00000531502 MBIPQ9NS73 344 aa18.73■□□□□ 0.59
CTSB-221ENST00000531502 CASP8AP2Q9UKL3 1982 aa18.73■□□□□ 0.59
CTSB-221ENST00000531502 ECE2O60344 883 aa18.72■□□□□ 0.59
CTSB-221ENST00000531502 RPS12P25398 132 aaKnown RBP18.72■□□□□ 0.59
CTSB-221ENST00000531502 RPS8P62241 208 aaKnown RBP18.72■□□□□ 0.59
CTSB-221ENST00000531502 WDR43Q15061 677 aaKnown RBP eCLIP18.72■□□□□ 0.59
CTSB-221ENST00000531502 TBC1D10BQ4KMP7 808 aaPredicted RBP18.72■□□□□ 0.59
CTSB-221ENST00000531502 TBC1D16Q8TBP0 767 aa18.72■□□□□ 0.59
CTSB-221ENST00000531502 DOK7Q18PE1 504 aa18.71■□□□□ 0.59
CTSB-221ENST00000531502 FAM161AQ3B820 660 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms