RNA–Protein interactions for RNA: ENST00000531432.1

PPP6R3-223, Transcript of protein phosphatase 6 regulatory subunit 3, human

TSL 3

Gene PPP6R3, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP6R3-223	ENST00000531432	BRPF3	Q9ULD4	1205 aa		11.28	□□□□□ -0.6
PPP6R3-223	ENST00000531432	BCR	P11274	1271 aa		11.27	□□□□□ -0.61
PPP6R3-223	ENST00000531432	PCSK2	P16519	638 aa		11.27	□□□□□ -0.61
PPP6R3-223	ENST00000531432	NLRP13	Q86W25	1043 aa		11.27	□□□□□ -0.61
PPP6R3-223	ENST00000531432	GJD3	Q8N144	294 aa		11.27	□□□□□ -0.61
PPP6R3-223	ENST00000531432	ZSCAN1	Q8NBB4	408 aa		11.27	□□□□□ -0.61
PPP6R3-223	ENST00000531432	MDFI	Q99750	246 aa		11.27	□□□□□ -0.61
PPP6R3-223	ENST00000531432	OIP5	O43482	229 aa		11.26	□□□□□ -0.61
PPP6R3-223	ENST00000531432	NDUFB5	O43674	189 aa		11.26	□□□□□ -0.61
PPP6R3-223	ENST00000531432	RPLP1	P05386	114 aa	Known RBP	11.26	□□□□□ -0.61
PPP6R3-223	ENST00000531432	INSM1	Q01101	510 aa	Predicted RBP	11.26	□□□□□ -0.61
PPP6R3-223	ENST00000531432	SVOP	Q8N4V2	548 aa		11.26	□□□□□ -0.61
PPP6R3-223	ENST00000531432	TNFRSF25	Q93038	417 aa		11.26	□□□□□ -0.61
PPP6R3-223	ENST00000531432	SHISA8	B8ZZ34	492 aa		11.25	□□□□□ -0.61
PPP6R3-223	ENST00000531432	MMP20	O60882	483 aa		11.25	□□□□□ -0.61
PPP6R3-223	ENST00000531432	MAP3K6	O95382	1288 aa		11.25	□□□□□ -0.61
PPP6R3-223	ENST00000531432	EPX	P11678	715 aa		11.25	□□□□□ -0.61
PPP6R3-223	ENST00000531432	USP5	P45974	858 aa		11.25	□□□□□ -0.61
PPP6R3-223	ENST00000531432	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
PPP6R3-223	ENST00000531432	GALNT6	Q8NCL4	622 aa		11.25	□□□□□ -0.61
PPP6R3-223	ENST00000531432	GZF1	Q9H116	711 aa	Predicted RBP	11.25	□□□□□ -0.61
PPP6R3-223	ENST00000531432	TMEM63C	Q9P1W3	806 aa		11.25	□□□□□ -0.61
PPP6R3-223	ENST00000531432	TBC1D8B	Q0IIM8	1120 aa		11.24	□□□□□ -0.61
PPP6R3-223	ENST00000531432	PDE12	Q6L8Q7	609 aa	Known RBP	11.24	□□□□□ -0.61
PPP6R3-223	ENST00000531432	XKR5	Q6UX68	686 aa		11.24	□□□□□ -0.61
PPP6R3-223	ENST00000531432	DHX32	Q7L7V1	743 aa	Known RBP	11.24	□□□□□ -0.61
PPP6R3-223	ENST00000531432	ZNF438	Q7Z4V0	828 aa		11.24	□□□□□ -0.61
PPP6R3-223	ENST00000531432	EDARADD	Q8WWZ3	215 aa		11.24	□□□□□ -0.61
PPP6R3-223	ENST00000531432	UBE2O	Q9C0C9	1292 aa	Known RBP	11.24	□□□□□ -0.61
PPP6R3-223	ENST00000531432	IGFLR1	Q9H665	355 aa		11.24	□□□□□ -0.61
PPP6R3-223	ENST00000531432	ELP3	Q9H9T3	547 aa		11.24	□□□□□ -0.61
PPP6R3-223	ENST00000531432	ADARB2-AS1	A8MUL3	147 aa		11.23	□□□□□ -0.61
PPP6R3-223	ENST00000531432	DNAJB12	Q9NXW2	375 aa	Known RBP	11.23	□□□□□ -0.61
PPP6R3-223	ENST00000531432	TLR7	Q9NYK1	1049 aa	Known RBP	11.23	□□□□□ -0.61
PPP6R3-223	ENST00000531432	DCTN4	Q9UJW0	460 aa		11.23	□□□□□ -0.61
PPP6R3-223	ENST00000531432	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.22	□□□□□ -0.61
PPP6R3-223	ENST00000531432	ELOA3D	A6NLF2	546 aa	Predicted RBP	11.22	□□□□□ -0.61
PPP6R3-223	ENST00000531432	ZBTB42	B2RXF5	422 aa		11.22	□□□□□ -0.61
PPP6R3-223	ENST00000531432	ARHGEF15	O94989	841 aa		11.22	□□□□□ -0.61
PPP6R3-223	ENST00000531432	ADH7	P40394	386 aa		11.22	□□□□□ -0.61
PPP6R3-223	ENST00000531432	ELOA3B	Q3SY89	546 aa		11.22	□□□□□ -0.61
PPP6R3-223	ENST00000531432	TTC16	Q8NEE8	873 aa		11.22	□□□□□ -0.61
PPP6R3-223	ENST00000531432	ELOA3	Q8NG57	546 aa		11.22	□□□□□ -0.61
PPP6R3-223	ENST00000531432	FAM129B	Q96TA1	746 aa		11.22	□□□□□ -0.61
PPP6R3-223	ENST00000531432	LRRC4B	Q9NT99	713 aa		11.22	□□□□□ -0.61
PPP6R3-223	ENST00000531432	ABI2	Q9NYB9	513 aa	Predicted RBP	11.22	□□□□□ -0.61
PPP6R3-223	ENST00000531432	IGHA2	P01877	340 aa		11.21	□□□□□ -0.61
PPP6R3-223	ENST00000531432	MAPK1	P28482	360 aa		11.21	□□□□□ -0.61
PPP6R3-223	ENST00000531432	MAP3K10	Q02779	954 aa		11.21	□□□□□ -0.61
PPP6R3-223	ENST00000531432	RBCK1	Q9BYM8	510 aa		11.21	□□□□□ -0.61
PPP6R3-223	ENST00000531432	CNTN3	Q9P232	1028 aa		11.21	□□□□□ -0.61
PPP6R3-223	ENST00000531432	ZBTB7C	A1YPR0	619 aa		11.2	□□□□□ -0.62
PPP6R3-223	ENST00000531432	EHHADH	Q08426	723 aa		11.2	□□□□□ -0.62
PPP6R3-223	ENST00000531432	CITED4	Q96RK1	184 aa		11.2	□□□□□ -0.62
PPP6R3-223	ENST00000531432	GPR182	O15218	404 aa		11.19	□□□□□ -0.62
PPP6R3-223	ENST00000531432	CYP2E1	P05181	493 aa	Predicted RBP	11.19	□□□□□ -0.62
PPP6R3-223	ENST00000531432	PSAP	P07602	524 aa		11.19	□□□□□ -0.62
PPP6R3-223	ENST00000531432	MLLT1	Q03111	559 aa	Predicted RBP	11.19	□□□□□ -0.62
PPP6R3-223	ENST00000531432	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.19	□□□□□ -0.62
PPP6R3-223	ENST00000531432	OR13H1	Q8NG92	308 aa		11.19	□□□□□ -0.62
PPP6R3-223	ENST00000531432	TRPM4	Q8TD43	1214 aa		11.19	□□□□□ -0.62
PPP6R3-223	ENST00000531432	FOXD3	Q9UJU5	478 aa	Predicted RBP	11.19	□□□□□ -0.62
PPP6R3-223	ENST00000531432	SLC6A14	Q9UN76	642 aa		11.19	□□□□□ -0.62
PPP6R3-223	ENST00000531432	TNFRSF21	O75509	655 aa		11.18	□□□□□ -0.62
PPP6R3-223	ENST00000531432	SOX18	P35713	384 aa		11.18	□□□□□ -0.62
PPP6R3-223	ENST00000531432	NRL	P54845	237 aa		11.18	□□□□□ -0.62
PPP6R3-223	ENST00000531432	GPLD1	P80108	840 aa		11.18	□□□□□ -0.62
PPP6R3-223	ENST00000531432	TRIM26	Q12899	539 aa	Predicted RBP	11.18	□□□□□ -0.62
PPP6R3-223	ENST00000531432	TMC7	Q7Z402	723 aa		11.18	□□□□□ -0.62
PPP6R3-223	ENST00000531432	C1orf127	Q8N9H9	656 aa		11.18	□□□□□ -0.62
PPP6R3-223	ENST00000531432	BTBD6	Q96KE9	485 aa		11.18	□□□□□ -0.62
PPP6R3-223	ENST00000531432	CHRD	Q9H2X0	955 aa		11.18	□□□□□ -0.62
PPP6R3-223	ENST00000531432	NAGPA	Q9UK23	515 aa		11.18	□□□□□ -0.62
PPP6R3-223	ENST00000531432	HOXD8	P13378	290 aa	Predicted RBP	11.17	□□□□□ -0.62
PPP6R3-223	ENST00000531432	MARS	P56192	900 aa	Known RBP	11.17	□□□□□ -0.62
PPP6R3-223	ENST00000531432	PLAUR	Q03405	335 aa		11.17	□□□□□ -0.62
PPP6R3-223	ENST00000531432	PDE3B	Q13370	1112 aa		11.17	□□□□□ -0.62
PPP6R3-223	ENST00000531432	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.17	□□□□□ -0.62
PPP6R3-223	ENST00000531432	CHSY3	Q70JA7	882 aa		11.17	□□□□□ -0.62
PPP6R3-223	ENST00000531432	TMC1	Q8TDI8	760 aa		11.17	□□□□□ -0.62
PPP6R3-223	ENST00000531432	STARD13	Q9Y3M8	1113 aa		11.17	□□□□□ -0.62
PPP6R3-223	ENST00000531432	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.17	□□□□□ -0.62
PPP6R3-223	ENST00000531432	ALAS2	P22557	587 aa		11.16	□□□□□ -0.62
PPP6R3-223	ENST00000531432	HFE2	Q6ZVN8	426 aa		11.16	□□□□□ -0.62
PPP6R3-223	ENST00000531432	NEDD1	Q8NHV4	660 aa		11.16	□□□□□ -0.62
PPP6R3-223	ENST00000531432	NSUN5	Q96P11	429 aa	Known RBP	11.16	□□□□□ -0.62
PPP6R3-223	ENST00000531432	HOXB4	P17483	251 aa	Predicted RBP	11.15	□□□□□ -0.62
PPP6R3-223	ENST00000531432	SNX29	Q8TEQ0	813 aa		11.15	□□□□□ -0.62
PPP6R3-223	ENST00000531432	ENAM	Q9NRM1	1142 aa		11.15	□□□□□ -0.62
PPP6R3-223	ENST00000531432	KANSL3	Q9P2N6	904 aa		11.15	□□□□□ -0.62
PPP6R3-223	ENST00000531432	CPB1	P15086	417 aa		11.14	□□□□□ -0.63
PPP6R3-223	ENST00000531432	AMPD1	P23109	780 aa		11.14	□□□□□ -0.63
PPP6R3-223	ENST00000531432	DMRTB1	Q96MA1	342 aa		11.14	□□□□□ -0.63
PPP6R3-223	ENST00000531432	NIF3L1	Q9GZT8	377 aa		11.14	□□□□□ -0.63
PPP6R3-223	ENST00000531432	PHF20L1	A8MW92	1017 aa		11.13	□□□□□ -0.63
PPP6R3-223	ENST00000531432		J3QW42	95 aa		11.13	□□□□□ -0.63
PPP6R3-223	ENST00000531432	PHACTR2	O75167	634 aa		11.13	□□□□□ -0.63
PPP6R3-223	ENST00000531432	ALB	P02768	609 aa		11.13	□□□□□ -0.63
PPP6R3-223	ENST00000531432	ORC1	Q13415	861 aa		11.13	□□□□□ -0.63
PPP6R3-223	ENST00000531432	PCSK7	Q16549	785 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 77 ms