RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 PDGFDQ9GZP0 370 aaPredicted RBP17.29■□□□□ 0.36
NXF1-207ENST00000530875 QSER1Q2KHR3 1735 aa17.28■□□□□ 0.36
NXF1-207ENST00000530875 DDX60Q8IY21 1712 aaKnown RBP17.28■□□□□ 0.36
NXF1-207ENST00000530875 SERPINB2P05120 415 aa17.28■□□□□ 0.36
NXF1-207ENST00000530875 PTPN12Q05209 780 aaKnown RBP17.28■□□□□ 0.36
NXF1-207ENST00000530875 SLC10A5Q5PT55 438 aa17.28■□□□□ 0.36
NXF1-207ENST00000530875 ILDR2Q71H61 639 aa17.28■□□□□ 0.36
NXF1-207ENST00000530875 CHD1LQ86WJ1 897 aa17.28■□□□□ 0.36
NXF1-207ENST00000530875 CNBD1Q8NA66 436 aa17.28■□□□□ 0.36
NXF1-207ENST00000530875 LNPKQ9C0E8 428 aa17.28■□□□□ 0.36
NXF1-207ENST00000530875 BCL11AQ9H165 835 aa17.28■□□□□ 0.36
NXF1-207ENST00000530875 SIL1Q9H173 461 aa17.28■□□□□ 0.36
NXF1-207ENST00000530875 GREM2Q9H772 168 aa17.28■□□□□ 0.36
NXF1-207ENST00000530875 NOP58Q9Y2X3 529 aaKnown RBP17.28■□□□□ 0.36
NXF1-207ENST00000530875 POLRMTO00411 1230 aaKnown RBP17.27■□□□□ 0.36
NXF1-207ENST00000530875 CCDC57Q2TAC2 916 aa17.27■□□□□ 0.36
NXF1-207ENST00000530875 COPRSQ9NQ92 184 aa17.27■□□□□ 0.36
NXF1-207ENST00000530875 SMARCA5O60264 1052 aaPredicted RBP17.27■□□□□ 0.35
NXF1-207ENST00000530875 OS9Q13438 667 aaPredicted RBP17.27■□□□□ 0.35
NXF1-207ENST00000530875 PRR5LQ6MZQ0 368 aa17.27■□□□□ 0.35
NXF1-207ENST00000530875 C3orf67Q6ZVT6 689 aa17.27■□□□□ 0.35
NXF1-207ENST00000530875 ZNF594Q96JF6 807 aaPredicted RBP17.27■□□□□ 0.35
NXF1-207ENST00000530875 LAMB2P55268 1798 aa17.26■□□□□ 0.35
NXF1-207ENST00000530875 ITGA6P23229 1130 aa17.26■□□□□ 0.35
NXF1-207ENST00000530875 IFIT5Q13325 482 aaKnown RBP17.26■□□□□ 0.35
NXF1-207ENST00000530875 RAB11FIP3O75154 756 aa17.25■□□□□ 0.35
NXF1-207ENST00000530875 MMP10P09238 476 aa17.25■□□□□ 0.35
NXF1-207ENST00000530875 RGS3P49796 1198 aa17.25■□□□□ 0.35
NXF1-207ENST00000530875 G3BP1Q13283 466 aaKnown RBP eCLIP17.25■□□□□ 0.35
NXF1-207ENST00000530875 HSP90AB4PQ58FF6 505 aa17.25■□□□□ 0.35
NXF1-207ENST00000530875 LRRCC1Q9C099 1032 aa17.25■□□□□ 0.35
NXF1-207ENST00000530875 ZBTB47Q9UFB7 747 aaPredicted RBP17.25■□□□□ 0.35
NXF1-207ENST00000530875 CCDC152Q4G0S7 254 aa17.25■□□□□ 0.35
NXF1-207ENST00000530875 MYH3P11055 1940 aa17.24■□□□□ 0.35
NXF1-207ENST00000530875 ANKRD18BA2A2Z9 1011 aa17.24■□□□□ 0.35
NXF1-207ENST00000530875 PDE4AP27815 886 aa17.24■□□□□ 0.35
NXF1-207ENST00000530875 RHPN1Q8TCX5 695 aa17.24■□□□□ 0.35
NXF1-207ENST00000530875 NLRP3Q96P20 1036 aa17.24■□□□□ 0.35
NXF1-207ENST00000530875 ST5P78524 1137 aa17.23■□□□□ 0.35
NXF1-207ENST00000530875 SF3B3Q15393 1217 aaKnown RBP17.23■□□□□ 0.35
NXF1-207ENST00000530875 TAF7LQ5H9L4 462 aa17.23■□□□□ 0.35
NXF1-207ENST00000530875 KIF1BPQ96EK5 621 aa17.23■□□□□ 0.35
NXF1-207ENST00000530875 IL1RAPL2Q9NP60 686 aa17.23■□□□□ 0.35
NXF1-207ENST00000530875 PARP3Q9Y6F1 533 aa17.23■□□□□ 0.35
NXF1-207ENST00000530875 ERC1Q8IUD2 1116 aa17.23■□□□□ 0.35
NXF1-207ENST00000530875 C16orf71Q8IYS4 520 aaPredicted RBP17.23■□□□□ 0.35
NXF1-207ENST00000530875 SEC31BQ9NQW1 1179 aa17.23■□□□□ 0.35
NXF1-207ENST00000530875 SASH1O94885 1247 aa17.22■□□□□ 0.35
NXF1-207ENST00000530875 PUS3Q9BZE2 481 aaKnown RBP17.22■□□□□ 0.35
NXF1-207ENST00000530875 RTL9Q8NET4 1388 aa17.22■□□□□ 0.35
NXF1-207ENST00000530875 EYA2O00167 538 aa17.21■□□□□ 0.35
NXF1-207ENST00000530875 LRRC24Q50LG9 513 aa17.21■□□□□ 0.35
NXF1-207ENST00000530875 TNRC6CQ9HCJ0 1690 aaKnown RBP17.21■□□□□ 0.35
NXF1-207ENST00000530875 R3HDM1Q15032 1099 aaKnown RBP17.21■□□□□ 0.35
NXF1-207ENST00000530875 ATG9AQ7Z3C6 839 aa17.21■□□□□ 0.35
NXF1-207ENST00000530875 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.21■□□□□ 0.35
NXF1-207ENST00000530875 OTUD7AQ8TE49 926 aaPredicted RBP17.2■□□□□ 0.34
NXF1-207ENST00000530875 RIC1Q4ADV7 1423 aa17.2■□□□□ 0.34
NXF1-207ENST00000530875 CIAO1O76071 339 aa17.19■□□□□ 0.34
NXF1-207ENST00000530875 LDHAL6AQ6ZMR3 332 aa17.19■□□□□ 0.34
NXF1-207ENST00000530875 SLC16A10Q8TF71 515 aa17.19■□□□□ 0.34
NXF1-207ENST00000530875 NRXN2Q9P2S2 1712 aa17.19■□□□□ 0.34
NXF1-207ENST00000530875 IL15P40933 162 aaPredicted RBP17.19■□□□□ 0.34
NXF1-207ENST00000530875 TFCP2Q12800 502 aa17.19■□□□□ 0.34
NXF1-207ENST00000530875 CNNM1Q9NRU3 951 aa17.18■□□□□ 0.34
NXF1-207ENST00000530875 FBXO3Q9UK99 471 aa17.18■□□□□ 0.34
NXF1-207ENST00000530875 CASZ1Q86V15 1759 aa17.18■□□□□ 0.34
NXF1-207ENST00000530875 COL4A1P02462 1669 aa17.18■□□□□ 0.34
NXF1-207ENST00000530875 CLASRPQ8N2M8 674 aaKnown RBP17.17■□□□□ 0.34
NXF1-207ENST00000530875 CDC5LQ99459 802 aaKnown RBP17.17■□□□□ 0.34
NXF1-207ENST00000530875 ZBTB7AO95365 584 aa17.17■□□□□ 0.34
NXF1-207ENST00000530875 IGHMBP2P38935 993 aaKnown RBP17.17■□□□□ 0.34
NXF1-207ENST00000530875 MPHOSPH8Q99549 860 aa17.17■□□□□ 0.34
NXF1-207ENST00000530875 BRIP1Q9BX63 1249 aa17.17■□□□□ 0.34
NXF1-207ENST00000530875 RIPOR2Q9Y4F9 1068 aa17.17■□□□□ 0.34
NXF1-207ENST00000530875 LRP5O75197 1615 aa17.17■□□□□ 0.34
NXF1-207ENST00000530875 PSDA5PKW4 1024 aaPredicted RBP17.16■□□□□ 0.34
NXF1-207ENST00000530875 CRY2Q49AN0 593 aa17.16■□□□□ 0.34
NXF1-207ENST00000530875 DDX46Q7L014 1031 aaKnown RBP17.16■□□□□ 0.34
NXF1-207ENST00000530875 PLEKHM2Q8IWE5 1019 aa17.16■□□□□ 0.34
NXF1-207ENST00000530875 CELF1Q92879 486 aaKnown RBP17.16■□□□□ 0.34
NXF1-207ENST00000530875 AACSQ86V21 672 aa17.15■□□□□ 0.34
NXF1-207ENST00000530875 ANKRD18AQ8IVF6 992 aa17.15■□□□□ 0.34
NXF1-207ENST00000530875 RPGRQ92834 1020 aaKnown RBP17.15■□□□□ 0.34
NXF1-207ENST00000530875 EAF2Q96CJ1 260 aaPredicted RBP17.15■□□□□ 0.34
NXF1-207ENST00000530875 ANP32EQ9BTT0 268 aa17.15■□□□□ 0.34
NXF1-207ENST00000530875 KLRG2A4D1S0 409 aaPredicted RBP17.14■□□□□ 0.33
NXF1-207ENST00000530875 TNNI3KQ59H18 835 aa17.14■□□□□ 0.33
NXF1-207ENST00000530875 METTL24Q5JXM2 366 aa17.14■□□□□ 0.33
NXF1-207ENST00000530875 CEP126Q9P2H0 1117 aa17.14■□□□□ 0.33
NXF1-207ENST00000530875 FPGT-TNNI3KV9GXZ4 949 aa17.14■□□□□ 0.33
NXF1-207ENST00000530875 SALL3Q9BXA9 1300 aa17.14■□□□□ 0.33
NXF1-207ENST00000530875 IFIT2P09913 472 aaKnown RBP17.13■□□□□ 0.33
NXF1-207ENST00000530875 MX1P20591 662 aa17.13■□□□□ 0.33
NXF1-207ENST00000530875 RPS8P62241 208 aaKnown RBP17.13■□□□□ 0.33
NXF1-207ENST00000530875 CCDC8Q9H0W5 538 aaPredicted RBP17.13■□□□□ 0.33
NXF1-207ENST00000530875 ATF5Q9Y2D1 282 aaPredicted RBP17.13■□□□□ 0.33
NXF1-207ENST00000530875 ANKRD31Q8N7Z5 1873 aa17.13■□□□□ 0.33
NXF1-207ENST00000530875 PDE6BP35913 854 aa17.13■□□□□ 0.33
NXF1-207ENST00000530875 TSHZ3Q63HK5 1081 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms