RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 FAM161AQ3B820 660 aa10.55□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 HSP90AB4PQ58FF6 505 aa10.55□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 KLHDC4Q8TBB5 520 aa10.55□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 SIL1Q9H173 461 aa10.55□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 GREM2Q9H772 168 aa10.55□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 PA2G4Q9UQ80 394 aaKnown RBP10.55□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 EXOC6BQ9Y2D4 811 aa10.55□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 RAB11FIP3O75154 756 aa10.54□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 ITGA6P23229 1130 aa10.54□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 RFX5P48382 616 aaPredicted RBP10.54□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 UBR3Q6ZT12 1888 aa10.54□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 C3orf67Q6ZVT6 689 aa10.54□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 SMC5Q8IY18 1101 aa10.54□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 ZNF594Q96JF6 807 aaPredicted RBP10.54□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 PDZRN3Q9UPQ7 1066 aa10.54□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 ATF5Q9Y2D1 282 aaPredicted RBP10.54□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 SCN7AQ01118 1682 aa10.53□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 BCORQ6W2J9 1755 aa10.53□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 PTPN12Q05209 780 aaKnown RBP10.53□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 SF3B3Q15393 1217 aaKnown RBP10.53□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 DDX46Q7L014 1031 aaKnown RBP10.53□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 COPRSQ9NQ92 184 aa10.53□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 NOP58Q9Y2X3 529 aaKnown RBP10.53□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 ABCC12Q96J65 1359 aa10.52□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 N4BP2Q86UW6 1770 aaPredicted RBP10.52□□□□□ -0.72
NEDD8-MDP1-201ENST00000530579 NUP98P52948 1817 aa10.52□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 AFDNP55196 1824 aaKnown RBP10.52□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 SMARCA5O60264 1052 aaPredicted RBP10.52□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 POLD1P28340 1107 aa10.52□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 IGHMBP2P38935 993 aaKnown RBP10.52□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 NUCB1Q02818 461 aa10.52□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 LDHAL6AQ6ZMR3 332 aa10.52□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 CHD1LQ86WJ1 897 aa10.52□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 ERC1Q8IUD2 1116 aa10.52□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 RPGRQ92834 1020 aaKnown RBP10.52□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 BRIP1Q9BX63 1249 aa10.52□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 LRRCC1Q9C099 1032 aa10.52□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 LNPKQ9C0E8 428 aa10.52□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 MTFR1LQ9H019 292 aa10.52□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 SEC31BQ9NQW1 1179 aa10.52□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 CNNM1Q9NRU3 951 aa10.52□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 C4AP0C0L4 1744 aa10.52□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 EYA2O00167 538 aa10.51□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 PDE6BP35913 854 aa10.51□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 ANKRD18AQ8IVF6 992 aa10.51□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 RHPN1Q8TCX5 695 aa10.51□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 KIF1BPQ96EK5 621 aa10.51□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 RBM17Q96I25 401 aaKnown RBP10.51□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 CDC5LQ99459 802 aaKnown RBP10.51□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 MPHOSPH8Q99549 860 aa10.51□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 ANKRD36CQ5JPF3 1778 aa10.5□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 CIAO1O76071 339 aa10.5□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 IL15P40933 162 aaPredicted RBP10.5□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 RGS3P49796 1198 aa10.5□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 LRRC24Q50LG9 513 aa10.5□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 SKAP1Q86WV1 359 aa10.5□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 PUS3Q9BZE2 481 aaKnown RBP10.5□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 IL1RAPL2Q9NP60 686 aa10.5□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 EP400Q96L91 3159 aa10.5□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 RTL9Q8NET4 1388 aa10.5□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 SASH1O94885 1247 aa10.49□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 RPS8P62241 208 aaKnown RBP10.49□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 TFCP2Q12800 502 aa10.49□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 METTL24Q5JXM2 366 aa10.49□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 C2CD5Q86YS7 1000 aa10.49□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 C16orf71Q8IYS4 520 aaPredicted RBP10.49□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 CEP126Q9P2H0 1117 aa10.49□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 FBXO3Q9UK99 471 aa10.49□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 H0YIN7 160 aa10.48□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 IFIT2P09913 472 aaKnown RBP10.48□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 GRAPQ13588 217 aa10.48□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 ATG9AQ7Z3C6 839 aa10.48□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 CLASRPQ8N2M8 674 aaKnown RBP10.48□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 GRAPLQ8TC17 118 aaPredicted RBP10.48□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 CELF1Q92879 486 aaKnown RBP10.48□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 ZNF622Q969S3 477 aaKnown RBP eCLIP10.48□□□□□ -0.731e-16■□□□□ 9.9
NEDD8-MDP1-201ENST00000530579 RIPOR2Q9Y4F9 1068 aa10.48□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 TUBGCP6Q96RT7 1819 aa10.47□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 KLRG2A4D1S0 409 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 BBOX1O75936 387 aa10.47□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 NPR1P16066 1061 aa10.47□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 PDE4AP27815 886 aa10.47□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 HOXA10P31260 410 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 CRY2Q49AN0 593 aa10.47□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 AACSQ86V21 672 aa10.47□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 KLHL34Q8N239 644 aa10.47□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 HELBQ8NG08 1087 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 NEUROD6Q96NK8 337 aa10.47□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 CRAMP1Q96RY5 1269 aa10.47□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 BSDC1Q9NW68 430 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 PPP1R1BQ9UD71 204 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 MROH5Q6ZUA9 1318 aa10.47□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 SRGNP10124 158 aa10.46□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 CHRNA5P30532 468 aa10.46□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 ALDH1B1P30837 517 aa10.46□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 MASTLQ96GX5 879 aa10.46□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 CCDC8Q9H0W5 538 aaPredicted RBP10.46□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 SPON1Q9HCB6 807 aa10.46□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 AKAP2Q9Y2D5 859 aa10.46□□□□□ -0.73
NEDD8-MDP1-201ENST00000530579 RIC1Q4ADV7 1423 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms