RNA–Protein interactions for RNA: ENST00000529379.1

NUP98-216, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-216ENST00000529379 PDE12Q6L8Q7 609 aaKnown RBP8.76□□□□□ -1.01
NUP98-216ENST00000529379 ZNF438Q7Z4V0 828 aa8.76□□□□□ -1.01
NUP98-216ENST00000529379 TTC16Q8NEE8 873 aa8.76□□□□□ -1.01
NUP98-216ENST00000529379 PNMA5Q96PV4 448 aa8.76□□□□□ -1.01
NUP98-216ENST00000529379 PRR12Q9ULL5 1215 aa8.76□□□□□ -1.01
NUP98-216ENST00000529379 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.76□□□□□ -1.01
NUP98-216ENST00000529379 INSM1Q01101 510 aaPredicted RBP8.75□□□□□ -1.01
NUP98-216ENST00000529379 ZNF468Q5VIY5 522 aaPredicted RBP8.75□□□□□ -1.01
NUP98-216ENST00000529379 SYT9Q86SS6 491 aa8.75□□□□□ -1.01
NUP98-216ENST00000529379 ZSCAN29Q8IWY8 852 aaPredicted RBP8.75□□□□□ -1.01
NUP98-216ENST00000529379 DMRTB1Q96MA1 342 aa8.75□□□□□ -1.01
NUP98-216ENST00000529379 ELP3Q9H9T3 547 aa8.75□□□□□ -1.01
NUP98-216ENST00000529379 EFCC1Q9HA90 598 aa8.75□□□□□ -1.01
NUP98-216ENST00000529379 KLF15Q9UIH9 416 aa8.75□□□□□ -1.01
NUP98-216ENST00000529379 RARAP10276 462 aa8.74□□□□□ -1.01
NUP98-216ENST00000529379 MAP2K3P46734 347 aa8.74□□□□□ -1.01
NUP98-216ENST00000529379 PCBP4P57723 403 aaKnown RBP8.74□□□□□ -1.01
NUP98-216ENST00000529379 SRSF11Q05519 484 aaKnown RBP8.74□□□□□ -1.01
NUP98-216ENST00000529379 FOXD3Q9UJU5 478 aaPredicted RBP8.74□□□□□ -1.01
NUP98-216ENST00000529379 NSFL1CQ9UNZ2 370 aaKnown RBP8.74□□□□□ -1.01
NUP98-216ENST00000529379 ANKRD33BA6NCL7 494 aa8.73□□□□□ -1.01
NUP98-216ENST00000529379 TREHO43280 583 aa8.73□□□□□ -1.01
NUP98-216ENST00000529379 MMP20O60882 483 aa8.73□□□□□ -1.01
NUP98-216ENST00000529379 ARAFP10398 606 aa8.73□□□□□ -1.01
NUP98-216ENST00000529379 DSC3Q14574 896 aa8.73□□□□□ -1.01
NUP98-216ENST00000529379 ALKBH8Q96BT7 664 aaKnown RBP8.73□□□□□ -1.01
NUP98-216ENST00000529379 NIF3L1Q9GZT8 377 aa8.73□□□□□ -1.01
NUP98-216ENST00000529379 ABI2Q9NYB9 513 aaPredicted RBP8.73□□□□□ -1.01
NUP98-216ENST00000529379 TNFRSF21O75509 655 aa8.72□□□□□ -1.01
NUP98-216ENST00000529379 ADAMTS2O95450 1211 aa8.72□□□□□ -1.01
NUP98-216ENST00000529379 NEUROD1Q13562 356 aa8.72□□□□□ -1.01
NUP98-216ENST00000529379 ZSCAN1Q8NBB4 408 aa8.72□□□□□ -1.01
NUP98-216ENST00000529379 AVENQ9NQS1 362 aaPredicted RBP8.72□□□□□ -1.01
NUP98-216ENST00000529379 CNTN3Q9P232 1028 aa8.72□□□□□ -1.01
NUP98-216ENST00000529379 SIN3BO75182 1162 aa8.71□□□□□ -1.02
NUP98-216ENST00000529379 MAP3K6O95382 1288 aa8.71□□□□□ -1.02
NUP98-216ENST00000529379 ORC1Q13415 861 aa8.71□□□□□ -1.02
NUP98-216ENST00000529379 TTC39BQ5VTQ0 682 aaPredicted RBP8.71□□□□□ -1.02
NUP98-216ENST00000529379 NPAS4Q8IUM7 802 aa8.71□□□□□ -1.02
NUP98-216ENST00000529379 C1orf127Q8N9H9 656 aa8.71□□□□□ -1.02
NUP98-216ENST00000529379 CHRDQ9H2X0 955 aa8.71□□□□□ -1.02
NUP98-216ENST00000529379 NEURL1BA8MQ27 555 aa8.7□□□□□ -1.02
NUP98-216ENST00000529379 CYP2E1P05181 493 aaPredicted RBP8.7□□□□□ -1.02
NUP98-216ENST00000529379 DHX32Q7L7V1 743 aaKnown RBP8.7□□□□□ -1.02
NUP98-216ENST00000529379 FCHSD1Q86WN1 690 aa8.7□□□□□ -1.02
NUP98-216ENST00000529379 OR13H1Q8NG92 308 aa8.7□□□□□ -1.02
NUP98-216ENST00000529379 ACDQ96AP0 544 aa8.7□□□□□ -1.02
NUP98-216ENST00000529379 OXCT2Q9BYC2 517 aaPredicted RBP8.7□□□□□ -1.02
NUP98-216ENST00000529379 TLR7Q9NYK1 1049 aaKnown RBP8.7□□□□□ -1.02
NUP98-216ENST00000529379 GGA1Q9UJY5 639 aa8.7□□□□□ -1.02
NUP98-216ENST00000529379 CCDC9Q9Y3X0 531 aaKnown RBP8.7□□□□□ -1.02
NUP98-216ENST00000529379 ZBTB42B2RXF5 422 aa8.69□□□□□ -1.02
NUP98-216ENST00000529379 SLURP2P0DP57 97 aa8.69□□□□□ -1.02
NUP98-216ENST00000529379 ADH6P28332 368 aa8.69□□□□□ -1.02
NUP98-216ENST00000529379 PLCB3Q01970 1234 aa8.69□□□□□ -1.02
NUP98-216ENST00000529379 FMR1Q06787 632 aaKnown RBP eCLIP8.69□□□□□ -1.02
NUP98-216ENST00000529379 SNX29Q8TEQ0 813 aa8.69□□□□□ -1.02
NUP98-216ENST00000529379 WHAMMQ8TF30 809 aa8.69□□□□□ -1.02
NUP98-216ENST00000529379 TNFRSF25Q93038 417 aa8.69□□□□□ -1.02
NUP98-216ENST00000529379 MDFIQ99750 246 aa8.69□□□□□ -1.02
NUP98-216ENST00000529379 IGFLR1Q9H665 355 aa8.69□□□□□ -1.02
NUP98-216ENST00000529379 STK17AQ9UEE5 414 aa8.69□□□□□ -1.02
NUP98-216ENST00000529379 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.69□□□□□ -1.02
NUP98-216ENST00000529379 PHACTR2O75167 634 aa8.68□□□□□ -1.02
NUP98-216ENST00000529379 PSAPP07602 524 aa8.68□□□□□ -1.02
NUP98-216ENST00000529379 C1orf229Q6ZS94 237 aaPredicted RBP8.68□□□□□ -1.02
NUP98-216ENST00000529379 UBE2OQ9C0C9 1292 aaKnown RBP8.68□□□□□ -1.02
NUP98-216ENST00000529379 ZFYVE28Q9HCC9 887 aa8.68□□□□□ -1.02
NUP98-216ENST00000529379 EREGO14944 169 aa8.67□□□□□ -1.02
NUP98-216ENST00000529379 P4HBP07237 508 aaKnown RBP8.67□□□□□ -1.02
NUP98-216ENST00000529379 ERCC3P19447 782 aa8.67□□□□□ -1.02
NUP98-216ENST00000529379 SOX18P35713 384 aa8.67□□□□□ -1.02
NUP98-216ENST00000529379 TBC1D8BQ0IIM8 1120 aa8.67□□□□□ -1.02
NUP98-216ENST00000529379 COL13A1Q5TAT6 717 aaPredicted RBP8.67□□□□□ -1.02
NUP98-216ENST00000529379 USPL1Q5W0Q7 1092 aa8.67□□□□□ -1.02
NUP98-216ENST00000529379 GOLGA6L1Q8N7Z2 621 aa8.67□□□□□ -1.02
NUP98-216ENST00000529379 RGS22Q8NE09 1264 aa8.67□□□□□ -1.02
NUP98-216ENST00000529379 TRPM4Q8TD43 1214 aa8.67□□□□□ -1.02
NUP98-216ENST00000529379 CSRNP1Q96S65 589 aa8.67□□□□□ -1.02
NUP98-216ENST00000529379 DNAJB12Q9NXW2 375 aaKnown RBP8.67□□□□□ -1.02
NUP98-216ENST00000529379 KANSL3Q9P2N6 904 aa8.67□□□□□ -1.02
NUP98-216ENST00000529379 GDF2Q9UK05 429 aaPredicted RBP8.67□□□□□ -1.02
NUP98-216ENST00000529379 ADARB2-AS1A8MUL3 147 aa8.66□□□□□ -1.02
NUP98-216ENST00000529379 EIF1AYO14602 144 aaKnown RBP8.66□□□□□ -1.02
NUP98-216ENST00000529379 NEFLP07196 543 aa8.66□□□□□ -1.02
NUP98-216ENST00000529379 HOXD8P13378 290 aaPredicted RBP8.66□□□□□ -1.02
NUP98-216ENST00000529379 MAPK8P45983 427 aa8.66□□□□□ -1.02
NUP98-216ENST00000529379 NRLP54845 237 aa8.66□□□□□ -1.02
NUP98-216ENST00000529379 MLLT1Q03111 559 aaPredicted RBP8.66□□□□□ -1.02
NUP98-216ENST00000529379 PLAURQ03405 335 aa8.66□□□□□ -1.02
NUP98-216ENST00000529379 LYPD4Q6UWN0 246 aa8.66□□□□□ -1.02
NUP98-216ENST00000529379 SLCO4C1Q6ZQN7 724 aa8.66□□□□□ -1.02
NUP98-216ENST00000529379 PHF20L1A8MW92 1017 aa8.65□□□□□ -1.02
NUP98-216ENST00000529379 CPNE3O75131 537 aaKnown RBP8.65□□□□□ -1.02
NUP98-216ENST00000529379 CES1P23141 567 aa8.65□□□□□ -1.02
NUP98-216ENST00000529379 GPLD1P80108 840 aa8.65□□□□□ -1.02
NUP98-216ENST00000529379 ZNF385CQ66K41 422 aaPredicted RBP8.65□□□□□ -1.02
NUP98-216ENST00000529379 HFE2Q6ZVN8 426 aa8.65□□□□□ -1.02
NUP98-216ENST00000529379 NSUN5Q96P11 429 aaKnown RBP8.65□□□□□ -1.02
NUP98-216ENST00000529379 ELOA3CA0A087WX78 387 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms