RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 HDGFL2Q7Z4V5 671 aaPredicted RBP7.71□□□□□ -1.18
CHKA-204ENST00000528235 TMC1Q8TDI8 760 aa7.71□□□□□ -1.18
CHKA-204ENST00000528235 SMARCC1Q92922 1105 aaPredicted RBP7.71□□□□□ -1.18
CHKA-204ENST00000528235 PXDNLA1KZ92 1463 aa7.7□□□□□ -1.18
CHKA-204ENST00000528235 C4AP0C0L4 1744 aa7.7□□□□□ -1.18
CHKA-204ENST00000528235 MEGF6O75095 1541 aa7.7□□□□□ -1.18
CHKA-204ENST00000528235 ST8SIA5O15466 376 aa7.7□□□□□ -1.18
CHKA-204ENST00000528235 HOXA2O43364 376 aa7.7□□□□□ -1.18
CHKA-204ENST00000528235 DXOO77932 396 aaKnown RBP7.7□□□□□ -1.18
CHKA-204ENST00000528235 AVPP01185 164 aa7.7□□□□□ -1.18
CHKA-204ENST00000528235 MMP10P09238 476 aa7.7□□□□□ -1.18
CHKA-204ENST00000528235 AMPHP49418 695 aa7.7□□□□□ -1.18
CHKA-204ENST00000528235 TRIM32Q13049 653 aa7.7□□□□□ -1.18
CHKA-204ENST00000528235 SMIM5Q71RC9 77 aa7.7□□□□□ -1.18
CHKA-204ENST00000528235 RAPGEF4Q8WZA2 1011 aa7.7□□□□□ -1.18
CHKA-204ENST00000528235 CGNL1Q0VF96 1302 aa7.7□□□□□ -1.18
CHKA-204ENST00000528235 DICER1Q9UPY3 1922 aaKnown RBP7.7□□□□□ -1.18
CHKA-204ENST00000528235 WNT7AO00755 349 aa7.69□□□□□ -1.18
CHKA-204ENST00000528235 AXIN1O15169 862 aa7.69□□□□□ -1.18
CHKA-204ENST00000528235 TATP17735 454 aaPredicted RBP7.69□□□□□ -1.18
CHKA-204ENST00000528235 NUTM1Q86Y26 1132 aa7.69□□□□□ -1.18
CHKA-204ENST00000528235 FAM217BQ9NTX9 383 aaPredicted RBP7.69□□□□□ -1.18
CHKA-204ENST00000528235 CCDC87Q9NVE4 849 aa7.69□□□□□ -1.18
CHKA-204ENST00000528235 RNF181Q9P0P0 153 aa7.69□□□□□ -1.18
CHKA-204ENST00000528235 TIAM2Q8IVF5 1701 aa7.69□□□□□ -1.18
CHKA-204ENST00000528235 C10orf71Q711Q0 1435 aa7.69□□□□□ -1.18
CHKA-204ENST00000528235 POTECB2RU33 542 aa7.68□□□□□ -1.18
CHKA-204ENST00000528235 DPEP1P16444 411 aa7.68□□□□□ -1.18
CHKA-204ENST00000528235 HOXC9P31274 260 aa7.68□□□□□ -1.18
CHKA-204ENST00000528235 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.68□□□□□ -1.18
CHKA-204ENST00000528235 AMIGO3Q86WK7 504 aa7.68□□□□□ -1.18
CHKA-204ENST00000528235 NLGN1Q8N2Q7 840 aa7.68□□□□□ -1.18
CHKA-204ENST00000528235 CCDC24Q8N4L8 307 aa7.68□□□□□ -1.18
CHKA-204ENST00000528235 SNIP1Q8TAD8 396 aaKnown RBP7.68□□□□□ -1.18
CHKA-204ENST00000528235 REPIN1Q9BWE0 567 aaKnown RBP7.68□□□□□ -1.18
CHKA-204ENST00000528235 PCDH11XQ9BZA7 1347 aa7.68□□□□□ -1.18
CHKA-204ENST00000528235 PCDH11YQ9BZA8 1340 aa7.68□□□□□ -1.18
CHKA-204ENST00000528235 EDC4Q6P2E9 1401 aaKnown RBP7.68□□□□□ -1.18
CHKA-204ENST00000528235 TMF1P82094 1093 aa7.67□□□□□ -1.18
CHKA-204ENST00000528235 TRAPPC3LQ5T215 181 aa7.67□□□□□ -1.18
CHKA-204ENST00000528235 HOMEZQ8IX15 550 aa7.67□□□□□ -1.18
CHKA-204ENST00000528235 USHBP1Q8N6Y0 703 aa7.67□□□□□ -1.18
CHKA-204ENST00000528235 TERF2IPQ9NYB0 399 aa7.67□□□□□ -1.18
CHKA-204ENST00000528235 PIM2Q9P1W9 311 aa7.67□□□□□ -1.18
CHKA-204ENST00000528235 PARP3Q9Y6F1 533 aa7.67□□□□□ -1.18
CHKA-204ENST00000528235 SBNO2Q9Y2G9 1366 aa7.67□□□□□ -1.18
CHKA-204ENST00000528235 SMG6Q86US8 1419 aaKnown RBP7.67□□□□□ -1.18
CHKA-204ENST00000528235 VIRMAQ69YN4 1812 aaKnown RBP7.66□□□□□ -1.18
CHKA-204ENST00000528235 LOC102724428A0A0B4J2F2 783 aa7.66□□□□□ -1.18
CHKA-204ENST00000528235 VEGFAP15692 232 aaPredicted RBP7.66□□□□□ -1.18
CHKA-204ENST00000528235 SMCPP49901 116 aaPredicted RBP7.66□□□□□ -1.18
CHKA-204ENST00000528235 SIK1P57059 783 aa7.66□□□□□ -1.18
CHKA-204ENST00000528235 DALRD3Q5D0E6 543 aaKnown RBP7.66□□□□□ -1.18
CHKA-204ENST00000528235 NBPF6Q5VWK0 638 aa7.66□□□□□ -1.18
CHKA-204ENST00000528235 LINC00116Q8NCU8 138 aa7.66□□□□□ -1.18
CHKA-204ENST00000528235 HLA-CQ95604 372 aa7.66□□□□□ -1.18
CHKA-204ENST00000528235 COG3Q96JB2 828 aa7.66□□□□□ -1.18
CHKA-204ENST00000528235 NBPF4Q96M43 638 aa7.66□□□□□ -1.18
CHKA-204ENST00000528235 COL5A3P25940 1745 aaPredicted RBP7.66□□□□□ -1.18
CHKA-204ENST00000528235 MYH14Q7Z406 1995 aaKnown RBP7.66□□□□□ -1.18
CHKA-204ENST00000528235 ROCK2O75116 1388 aaKnown RBP7.65□□□□□ -1.18
CHKA-204ENST00000528235 AFDNP55196 1824 aaKnown RBP7.65□□□□□ -1.18
CHKA-204ENST00000528235 CACNA1SQ13698 1873 aa7.65□□□□□ -1.18
CHKA-204ENST00000528235 MAP3K19Q56UN5 1328 aa7.65□□□□□ -1.18
CHKA-204ENST00000528235 AIDAQ96BJ3 306 aa7.65□□□□□ -1.18
CHKA-204ENST00000528235 MRGPRX2Q96LB1 330 aa7.65□□□□□ -1.18
CHKA-204ENST00000528235 SLC12A5Q9H2X9 1139 aa7.65□□□□□ -1.18
CHKA-204ENST00000528235 CD163L1Q9NR16 1453 aa7.65□□□□□ -1.18
CHKA-204ENST00000528235 RTCBQ9Y3I0 505 aaKnown RBP7.65□□□□□ -1.18
CHKA-204ENST00000528235 KIF20BQ96Q89 1820 aa7.64□□□□□ -1.19
CHKA-204ENST00000528235 JUNDP17535 347 aa7.64□□□□□ -1.19
CHKA-204ENST00000528235 RFC4P35249 363 aa7.64□□□□□ -1.19
CHKA-204ENST00000528235 WNT7BP56706 349 aa7.64□□□□□ -1.19
CHKA-204ENST00000528235 RETREG3Q86VR2 466 aa7.64□□□□□ -1.19
CHKA-204ENST00000528235 PIGBQ92521 554 aa7.64□□□□□ -1.19
CHKA-204ENST00000528235 DCAF5Q96JK2 942 aa7.64□□□□□ -1.19
CHKA-204ENST00000528235 PRDM10Q9NQV6 1147 aa7.64□□□□□ -1.19
CHKA-204ENST00000528235 TMOD3Q9NYL9 352 aa7.64□□□□□ -1.19
CHKA-204ENST00000528235 MKRN1Q9UHC7 482 aaKnown RBP7.64□□□□□ -1.19
CHKA-204ENST00000528235 DLEC1Q9Y238 1755 aa7.64□□□□□ -1.19
CHKA-204ENST00000528235 ZNF831Q5JPB2 1677 aa7.63□□□□□ -1.19
CHKA-204ENST00000528235 A0A1W2PP64 1363 aa7.63□□□□□ -1.19
CHKA-204ENST00000528235 ZC3H4Q9UPT8 1303 aaKnown RBP7.63□□□□□ -1.19
CHKA-204ENST00000528235 GLTPD2A6NH11 291 aa7.63□□□□□ -1.19
CHKA-204ENST00000528235 FOXN1O15353 648 aa7.63□□□□□ -1.19
CHKA-204ENST00000528235 FBLN1P23142 703 aa7.63□□□□□ -1.19
CHKA-204ENST00000528235 GUCA2AQ02747 115 aa7.63□□□□□ -1.19
CHKA-204ENST00000528235 RTL1A6NKG5 1358 aa7.62□□□□□ -1.19
CHKA-204ENST00000528235 CYP27B1O15528 508 aa7.62□□□□□ -1.19
CHKA-204ENST00000528235 FDX1P10109 184 aa7.62□□□□□ -1.19
CHKA-204ENST00000528235 SMPD1P17405 629 aa7.62□□□□□ -1.19
CHKA-204ENST00000528235 KCNA3P22001 575 aa7.62□□□□□ -1.19
CHKA-204ENST00000528235 SSTR3P32745 418 aaPredicted RBP7.62□□□□□ -1.19
CHKA-204ENST00000528235 CTCFP49711 727 aaPredicted RBP7.62□□□□□ -1.19
CHKA-204ENST00000528235 MLLT1Q03111 559 aaPredicted RBP7.62□□□□□ -1.19
CHKA-204ENST00000528235 ITPK1Q13572 414 aa7.62□□□□□ -1.19
CHKA-204ENST00000528235 SCN4AP35499 1836 aa7.62□□□□□ -1.19
CHKA-204ENST00000528235 C6orf229H3BNL8 230 aa7.61□□□□□ -1.19
CHKA-204ENST00000528235 GYS1P13807 737 aa7.61□□□□□ -1.19
CHKA-204ENST00000528235 LMNB1P20700 586 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms