RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 RIC3Q7Z5B4 369 aa11.41□□□□□ -0.58
CCDC90B-208ENST00000527025 PI4KAP1Q8N8J0 262 aa11.41□□□□□ -0.58
CCDC90B-208ENST00000527025 MYD88Q99836 296 aa11.41□□□□□ -0.58
CCDC90B-208ENST00000527025 TSPYL2Q9H2G4 693 aaPredicted RBP11.41□□□□□ -0.58
CCDC90B-208ENST00000527025 TRMT112Q9UI30 125 aaKnown RBP11.41□□□□□ -0.58
CCDC90B-208ENST00000527025 PDZRN3Q9UPQ7 1066 aa11.41□□□□□ -0.58
CCDC90B-208ENST00000527025 MAP3K2Q9Y2U5 619 aa11.41□□□□□ -0.58
CCDC90B-208ENST00000527025 RIC1Q4ADV7 1423 aa11.41□□□□□ -0.58
CCDC90B-208ENST00000527025 SNED1Q8TER0 1413 aa11.41□□□□□ -0.58
CCDC90B-208ENST00000527025 KSR2Q6VAB6 950 aa11.4□□□□□ -0.58
CCDC90B-208ENST00000527025 CNKSR1Q969H4 720 aa11.4□□□□□ -0.58
CCDC90B-208ENST00000527025 METTL22Q9BUU2 404 aaPredicted RBP11.4□□□□□ -0.58
CCDC90B-208ENST00000527025 MYH16Q9H6N6 1097 aa11.4□□□□□ -0.58
CCDC90B-208ENST00000527025 CACNA1FO60840 1977 aa11.39□□□□□ -0.59
CCDC90B-208ENST00000527025 FLIIQ13045 1269 aa11.39□□□□□ -0.59
CCDC90B-208ENST00000527025 ZNF526Q8TF50 670 aaPredicted RBP11.39□□□□□ -0.59
CCDC90B-208ENST00000527025 SH3TC1Q8TE82 1336 aa11.38□□□□□ -0.59
CCDC90B-208ENST00000527025 CWF19L2Q2TBE0 894 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-208ENST00000527025 NLRP3Q96P20 1036 aa11.38□□□□□ -0.59
CCDC90B-208ENST00000527025 STK31Q9BXU1 1019 aa11.38□□□□□ -0.59
CCDC90B-208ENST00000527025 RNF181Q9P0P0 153 aa11.38□□□□□ -0.59
CCDC90B-208ENST00000527025 DICER1Q9UPY3 1922 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-208ENST00000527025 E9PSI1 815 aa11.37□□□□□ -0.59
CCDC90B-208ENST00000527025 F6X3S4 739 aa11.37□□□□□ -0.59
CCDC90B-208ENST00000527025 ALDH1B1P30837 517 aa11.37□□□□□ -0.59
CCDC90B-208ENST00000527025 ZBTB38Q8NAP3 1195 aaPredicted RBP11.37□□□□□ -0.59
CCDC90B-208ENST00000527025 CRAMP1Q96RY5 1269 aa11.37□□□□□ -0.59
CCDC90B-208ENST00000527025 METRNQ9UJH8 293 aa11.37□□□□□ -0.59
CCDC90B-208ENST00000527025 COL4A5P29400 1685 aa11.36□□□□□ -0.59
CCDC90B-208ENST00000527025 ABCC4O15439 1325 aa11.36□□□□□ -0.59
CCDC90B-208ENST00000527025 RNF123Q5XPI4 1314 aa11.36□□□□□ -0.59
CCDC90B-208ENST00000527025 NEURL1BA8MQ27 555 aa11.36□□□□□ -0.59
CCDC90B-208ENST00000527025 IRS4O14654 1257 aaPredicted RBP11.36□□□□□ -0.59
CCDC90B-208ENST00000527025 LMNB1P20700 586 aa11.36□□□□□ -0.59
CCDC90B-208ENST00000527025 SF3B3Q15393 1217 aaKnown RBP11.36□□□□□ -0.59
CCDC90B-208ENST00000527025 MRPL50Q8N5N7 158 aaKnown RBP11.36□□□□□ -0.59
CCDC90B-208ENST00000527025 CCDC191Q8NCU4 936 aa11.36□□□□□ -0.59
CCDC90B-208ENST00000527025 RPGRQ92834 1020 aaKnown RBP11.36□□□□□ -0.59
CCDC90B-208ENST00000527025 TIAM2Q8IVF5 1701 aa11.35□□□□□ -0.59
CCDC90B-208ENST00000527025 H7C1W4 665 aa11.35□□□□□ -0.59
CCDC90B-208ENST00000527025 DDX58O95786 925 aaKnown RBP11.35□□□□□ -0.59
CCDC90B-208ENST00000527025 PCCAP05165 728 aaPredicted RBP11.35□□□□□ -0.59
CCDC90B-208ENST00000527025 CASP7P55210 303 aa11.35□□□□□ -0.59
CCDC90B-208ENST00000527025 FKBP5Q13451 457 aaPredicted RBP11.35□□□□□ -0.59
CCDC90B-208ENST00000527025 SSH1Q8WYL5 1049 aa11.35□□□□□ -0.59
CCDC90B-208ENST00000527025 CELF1Q92879 486 aaKnown RBP11.35□□□□□ -0.59
CCDC90B-208ENST00000527025 KIF12Q96FN5 646 aa11.35□□□□□ -0.59
CCDC90B-208ENST00000527025 RBM17Q96I25 401 aaKnown RBP11.35□□□□□ -0.59
CCDC90B-208ENST00000527025 CHMP4AQ9BY43 222 aa11.35□□□□□ -0.59
CCDC90B-208ENST00000527025 ZNF277Q9NRM2 450 aaPredicted RBP11.35□□□□□ -0.59
CCDC90B-208ENST00000527025 CWC25Q9NXE8 425 aaPredicted RBP11.35□□□□□ -0.59
CCDC90B-208ENST00000527025 LTBP3Q9NS15 1303 aa11.35□□□□□ -0.59
CCDC90B-208ENST00000527025 CCDC93Q567U6 631 aa11.34□□□□□ -0.59
CCDC90B-208ENST00000527025 BEND3Q5T5X7 828 aa11.34□□□□□ -0.59
CCDC90B-208ENST00000527025 DNAAF4Q8WXU2 420 aa11.34□□□□□ -0.59
CCDC90B-208ENST00000527025 BCL2L13Q9BXK5 485 aa11.34□□□□□ -0.59
CCDC90B-208ENST00000527025 TAOK3Q9H2K8 898 aa11.34□□□□□ -0.59
CCDC90B-208ENST00000527025 NMRK2Q9NPI5 230 aa11.34□□□□□ -0.59
CCDC90B-208ENST00000527025 SEC31BQ9NQW1 1179 aa11.34□□□□□ -0.59
CCDC90B-208ENST00000527025 KIF3CO14782 793 aa11.33□□□□□ -0.6
CCDC90B-208ENST00000527025 PPEF1O14829 653 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-208ENST00000527025 ATN1P54259 1190 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-208ENST00000527025 HNRNPUQ00839 825 aaKnown RBP eCLIP11.33□□□□□ -0.6
CCDC90B-208ENST00000527025 FKBP4Q02790 459 aaKnown RBP eCLIP11.33□□□□□ -0.6
CCDC90B-208ENST00000527025 GCKRQ14397 625 aa11.33□□□□□ -0.6
CCDC90B-208ENST00000527025 SLC39A7Q92504 469 aa11.33□□□□□ -0.6
CCDC90B-208ENST00000527025 CCDC85AQ96PX6 553 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-208ENST00000527025 TRPC6Q9Y210 931 aa11.33□□□□□ -0.6
CCDC90B-208ENST00000527025 ATP6V0A2Q9Y487 856 aa11.33□□□□□ -0.6
CCDC90B-208ENST00000527025 POTECB2RU33 542 aa11.32□□□□□ -0.6
CCDC90B-208ENST00000527025 C7P10643 843 aa11.32□□□□□ -0.6
CCDC90B-208ENST00000527025 GRAPQ13588 217 aa11.32□□□□□ -0.6
CCDC90B-208ENST00000527025 UBE3BQ7Z3V4 1068 aa11.32□□□□□ -0.6
CCDC90B-208ENST00000527025 LINS1Q8NG48 757 aa11.32□□□□□ -0.6
CCDC90B-208ENST00000527025 GRAPLQ8TC17 118 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-208ENST00000527025 GPBP1L1Q9HC44 474 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-208ENST00000527025 DUOX1Q9NRD9 1551 aa11.32□□□□□ -0.6
CCDC90B-208ENST00000527025 ZBED9Q6R2W3 1325 aa11.32□□□□□ -0.6
CCDC90B-208ENST00000527025 CDHR2Q9BYE9 1310 aa11.32□□□□□ -0.6
CCDC90B-208ENST00000527025 LRRC37AA6NMS7 1700 aa11.32□□□□□ -0.6
CCDC90B-208ENST00000527025 WTIPA6NIX2 430 aaPredicted RBP11.31□□□□□ -0.6
CCDC90B-208ENST00000527025 BBOX1O75936 387 aa11.31□□□□□ -0.6
CCDC90B-208ENST00000527025 NEXNQ0ZGT2 675 aa11.31□□□□□ -0.6
CCDC90B-208ENST00000527025 SOGA3Q5TF21 947 aa11.31□□□□□ -0.6
CCDC90B-208ENST00000527025 DDX46Q7L014 1031 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-208ENST00000527025 SP8Q8IXZ3 490 aa11.31□□□□□ -0.6
CCDC90B-208ENST00000527025 RASEFQ8IZ41 740 aa11.31□□□□□ -0.6
CCDC90B-208ENST00000527025 RTKN2Q8IZC4 609 aa11.31□□□□□ -0.6
CCDC90B-208ENST00000527025 TTLL11Q8NHH1 800 aa11.31□□□□□ -0.6
CCDC90B-208ENST00000527025 PLSCR2Q9NRY7 297 aa11.31□□□□□ -0.6
CCDC90B-208ENST00000527025 LTBP1Q14766 1721 aa11.31□□□□□ -0.6
CCDC90B-208ENST00000527025 MYH3P11055 1940 aa11.31□□□□□ -0.6
CCDC90B-208ENST00000527025 PDE8AO60658 829 aa11.3□□□□□ -0.6
CCDC90B-208ENST00000527025 EPHA10Q5JZY3 1008 aa11.3□□□□□ -0.6
CCDC90B-208ENST00000527025 PSMD1Q99460 953 aa11.3□□□□□ -0.6
CCDC90B-208ENST00000527025 GREM2Q9H772 168 aa11.3□□□□□ -0.6
CCDC90B-208ENST00000527025 RRAGCQ9HB90 399 aa11.3□□□□□ -0.6
CCDC90B-208ENST00000527025 ZNF541Q9H0D2 1346 aa11.3□□□□□ -0.6
CCDC90B-208ENST00000527025 GLTPD2A6NH11 291 aa11.29□□□□□ -0.6
CCDC90B-208ENST00000527025 DDNO94850 711 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms