RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 GNAT3A8MTJ3 354 aa14.39□□□□□ -0.11
NEDD8-204ENST00000526430 PPEF1O14829 653 aaPredicted RBP14.39□□□□□ -0.11
NEDD8-204ENST00000526430 ZNF157P51786 506 aaPredicted RBP14.39□□□□□ -0.11
NEDD8-204ENST00000526430 USP48Q86UV5 1035 aa14.39□□□□□ -0.11
NEDD8-204ENST00000526430 RTFDC1Q9BY42 306 aaPredicted RBP14.39□□□□□ -0.11
NEDD8-204ENST00000526430 TRIOBPQ9H2D6 2365 aa14.39□□□□□ -0.11
NEDD8-204ENST00000526430 LRRC37AA6NMS7 1700 aa14.38□□□□□ -0.11
NEDD8-204ENST00000526430 FAM177BA6PVY3 158 aa14.38□□□□□ -0.11
NEDD8-204ENST00000526430 PIP4K2AP48426 406 aaPredicted RBP14.38□□□□□ -0.11
NEDD8-204ENST00000526430 TNIP1Q15025 636 aa14.38□□□□□ -0.11
NEDD8-204ENST00000526430 SUPT20HQ8NEM7 779 aa14.38□□□□□ -0.11
NEDD8-204ENST00000526430 BCL2L13Q9BXK5 485 aa14.38□□□□□ -0.11
NEDD8-204ENST00000526430 CUL9Q8IWT3 2517 aa14.38□□□□□ -0.11
NEDD8-204ENST00000526430 SZT2Q5T011 3432 aa14.37□□□□□ -0.11
NEDD8-204ENST00000526430 NOM1Q5C9Z4 860 aaKnown RBP14.37□□□□□ -0.11
NEDD8-204ENST00000526430 FBXO46Q6PJ61 603 aaPredicted RBP14.37□□□□□ -0.11
NEDD8-204ENST00000526430 RBM17Q96I25 401 aaKnown RBP14.37□□□□□ -0.11
NEDD8-204ENST00000526430 CNOT7Q9UIV1 285 aaKnown RBP14.37□□□□□ -0.11
NEDD8-204ENST00000526430 CENPFP49454 3210 aa14.37□□□□□ -0.11
NEDD8-204ENST00000526430 NBPF26B4DH59 902 aa14.36□□□□□ -0.11
NEDD8-204ENST00000526430 H7C1D1 291 aa14.36□□□□□ -0.11
NEDD8-204ENST00000526430 HLFQ16534 295 aa14.36□□□□□ -0.11
NEDD8-204ENST00000526430 NBPF10Q6P3W6 841 aaKnown RBP14.36□□□□□ -0.11
NEDD8-204ENST00000526430 KRT26Q7Z3Y9 468 aa14.36□□□□□ -0.11
NEDD8-204ENST00000526430 CCDC146Q8IYE0 955 aa14.36□□□□□ -0.11
NEDD8-204ENST00000526430 GAS2L2Q8NHY3 880 aa14.36□□□□□ -0.11
NEDD8-204ENST00000526430 HDAC9Q9UKV0 1011 aa14.36□□□□□ -0.11
NEDD8-204ENST00000526430 ATP6V0A2Q9Y487 856 aa14.36□□□□□ -0.11
NEDD8-204ENST00000526430 TAF1P21675 1872 aa14.35□□□□□ -0.11
NEDD8-204ENST00000526430 LAMB1P07942 1786 aa14.35□□□□□ -0.11
NEDD8-204ENST00000526430 KCNQ3O43525 872 aa14.35□□□□□ -0.11
NEDD8-204ENST00000526430 SNRPA1P09661 255 aaKnown RBP14.35□□□□□ -0.11
NEDD8-204ENST00000526430 KIAA2012Q0VF49 1180 aa14.35□□□□□ -0.11
NEDD8-204ENST00000526430 SLC51AQ86UW1 340 aa14.35□□□□□ -0.11
NEDD8-204ENST00000526430 NUTM1Q86Y26 1132 aa14.35□□□□□ -0.11
NEDD8-204ENST00000526430 ZNF296Q8WUU4 475 aaPredicted RBP14.35□□□□□ -0.11
NEDD8-204ENST00000526430 TMX4Q9H1E5 349 aaPredicted RBP14.35□□□□□ -0.11
NEDD8-204ENST00000526430 PSME4Q14997 1843 aa14.35□□□□□ -0.11
NEDD8-204ENST00000526430 DUOX1Q9NRD9 1551 aa14.34□□□□□ -0.11
NEDD8-204ENST00000526430 BTBD11A6QL63 1104 aa14.34□□□□□ -0.11
NEDD8-204ENST00000526430 DLK2Q6UY11 383 aa14.34□□□□□ -0.11
NEDD8-204ENST00000526430 MICALL2Q8IY33 904 aa14.34□□□□□ -0.11
NEDD8-204ENST00000526430 DPF2Q92785 391 aa14.34□□□□□ -0.11
NEDD8-204ENST00000526430 BRCA2P51587 3418 aa14.34□□□□□ -0.11
NEDD8-204ENST00000526430 DLG5Q8TDM6 1919 aa14.33□□□□□ -0.11
NEDD8-204ENST00000526430 PRAMEF22A3QJZ6 481 aa14.33□□□□□ -0.12
NEDD8-204ENST00000526430 ERVV-1B6SEH8 477 aa14.33□□□□□ -0.12
NEDD8-204ENST00000526430 RAD17O75943 681 aa14.33□□□□□ -0.12
NEDD8-204ENST00000526430 WDR43Q15061 677 aaKnown RBP eCLIP14.33□□□□□ -0.12
NEDD8-204ENST00000526430 RUNDC1Q96C34 613 aa14.33□□□□□ -0.12
NEDD8-204ENST00000526430 SHTN1A0MZ66 631 aa14.32□□□□□ -0.12
NEDD8-204ENST00000526430 RASAL3Q86YV0 1011 aa14.32□□□□□ -0.12
NEDD8-204ENST00000526430 DCPSQ96C86 337 aaKnown RBP14.32□□□□□ -0.12
NEDD8-204ENST00000526430 SCN9AQ15858 1988 aa14.32□□□□□ -0.12
NEDD8-204ENST00000526430 TCERG1O14776 1098 aaKnown RBP14.31□□□□□ -0.12
NEDD8-204ENST00000526430 TMPOP42166 694 aaKnown RBP14.31□□□□□ -0.12
NEDD8-204ENST00000526430 NFE2L2Q16236 605 aa14.31□□□□□ -0.12
NEDD8-204ENST00000526430 FAM9BQ8IZU0 186 aa14.31□□□□□ -0.12
NEDD8-204ENST00000526430 KDM3BQ7LBC6 1761 aa14.3□□□□□ -0.12
NEDD8-204ENST00000526430 YDJCA8MPS7 323 aa14.3□□□□□ -0.12
NEDD8-204ENST00000526430 ADM5C9JUS6 153 aa14.3□□□□□ -0.12
NEDD8-204ENST00000526430 APAF1O14727 1248 aa14.3□□□□□ -0.12
NEDD8-204ENST00000526430 FKBP1BP68106 108 aa14.3□□□□□ -0.12
NEDD8-204ENST00000526430 INTS3Q68E01 1043 aaKnown RBP14.3□□□□□ -0.12
NEDD8-204ENST00000526430 DPP8Q6V1X1 898 aaPredicted RBP14.3□□□□□ -0.12
NEDD8-204ENST00000526430 SAMD7Q7Z3H4 446 aa14.3□□□□□ -0.12
NEDD8-204ENST00000526430 TRIM35Q9UPQ4 493 aa14.3□□□□□ -0.12
NEDD8-204ENST00000526430 UBN2Q6ZU65 1347 aa14.3□□□□□ -0.12
NEDD8-204ENST00000526430 RPS12P25398 132 aaKnown RBP14.29□□□□□ -0.12
NEDD8-204ENST00000526430 DCTN1Q14203 1278 aa14.29□□□□□ -0.12
NEDD8-204ENST00000526430 SP8Q8IXZ3 490 aa14.29□□□□□ -0.12
NEDD8-204ENST00000526430 CFHR5Q9BXR6 569 aa14.29□□□□□ -0.12
NEDD8-204ENST00000526430 PNNQ9H307 717 aaKnown RBP14.29□□□□□ -0.12
NEDD8-204ENST00000526430 RRP7AQ9Y3A4 280 aaKnown RBP14.29□□□□□ -0.12
NEDD8-204ENST00000526430 ABCC4O15439 1325 aa14.29□□□□□ -0.12
NEDD8-204ENST00000526430 MAP3K15Q6ZN16 1313 aa14.29□□□□□ -0.12
NEDD8-204ENST00000526430 A0A0C4DFX4 3053 aa14.28□□□□□ -0.12
NEDD8-204ENST00000526430 GPR25O00155 361 aa14.28□□□□□ -0.12
NEDD8-204ENST00000526430 DLL1O00548 723 aa14.28□□□□□ -0.12
NEDD8-204ENST00000526430 BBOX1O75936 387 aa14.28□□□□□ -0.12
NEDD8-204ENST00000526430 NTSR2O95665 410 aa14.28□□□□□ -0.12
NEDD8-204ENST00000526430 TBC1D8O95759 1140 aa14.28□□□□□ -0.12
NEDD8-204ENST00000526430 EGFRP00533 1210 aa14.28□□□□□ -0.12
NEDD8-204ENST00000526430 TBC1D10BQ4KMP7 808 aaPredicted RBP14.28□□□□□ -0.12
NEDD8-204ENST00000526430 C3orf67Q6ZVT6 689 aa14.28□□□□□ -0.12
NEDD8-204ENST00000526430 SULF1Q8IWU6 871 aa14.28□□□□□ -0.12
NEDD8-204ENST00000526430 MPNDQ8N594 471 aa14.28□□□□□ -0.12
NEDD8-204ENST00000526430 HTATSF1O43719 755 aaKnown RBP14.27□□□□□ -0.13
NEDD8-204ENST00000526430 RIPK4P57078 832 aa14.27□□□□□ -0.13
NEDD8-204ENST00000526430 SUSD4Q5VX71 490 aa14.27□□□□□ -0.13
NEDD8-204ENST00000526430 MCM10Q7L590 875 aa14.27□□□□□ -0.13
NEDD8-204ENST00000526430 CDCA5Q96FF9 252 aa14.27□□□□□ -0.13
NEDD8-204ENST00000526430 NLRP3Q96P20 1036 aa14.27□□□□□ -0.13
NEDD8-204ENST00000526430 ZBTB12Q9Y330 459 aaPredicted RBP14.27□□□□□ -0.13
NEDD8-204ENST00000526430 POTEFA5A3E0 1075 aa14.26□□□□□ -0.13
NEDD8-204ENST00000526430 PSMD14O00487 310 aa14.26□□□□□ -0.13
NEDD8-204ENST00000526430 FKTNO75072 461 aa14.26□□□□□ -0.13
NEDD8-204ENST00000526430 TM4SF4P48230 202 aa14.26□□□□□ -0.13
NEDD8-204ENST00000526430 ZNF34Q8IZ26 560 aa14.26□□□□□ -0.13
NEDD8-204ENST00000526430 THUMPD2Q9BTF0 503 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms