RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 LBX1P52954 281 aa13.97□□□□□ -0.17
VPS26B-203ENST00000525918 NEUROD2Q15784 382 aa13.97□□□□□ -0.17
VPS26B-203ENST00000525918 DDX46Q7L014 1031 aaKnown RBP13.97□□□□□ -0.17
VPS26B-203ENST00000525918 DDX60Q8IY21 1712 aaKnown RBP13.96□□□□□ -0.17
VPS26B-203ENST00000525918 FMR1Q06787 632 aaKnown RBP eCLIP13.96□□□□□ -0.17
VPS26B-203ENST00000525918 KIAA2012Q0VF49 1180 aa13.96□□□□□ -0.17
VPS26B-203ENST00000525918 CST9Q5W186 159 aa13.96□□□□□ -0.17
VPS26B-203ENST00000525918 TMC4Q7Z404 712 aa13.96□□□□□ -0.17
VPS26B-203ENST00000525918 CNKSR2Q8WXI2 1034 aa13.96□□□□□ -0.17
VPS26B-203ENST00000525918 THSD7BQ9C0I4 1608 aa13.96□□□□□ -0.17
VPS26B-203ENST00000525918 CDHR2Q9BYE9 1310 aa13.95□□□□□ -0.18
VPS26B-203ENST00000525918 GRAPQ13588 217 aa13.95□□□□□ -0.18
VPS26B-203ENST00000525918 TNIP1Q15025 636 aa13.95□□□□□ -0.18
VPS26B-203ENST00000525918 CIAPIN1Q6FI81 312 aa13.95□□□□□ -0.18
VPS26B-203ENST00000525918 GRAPLQ8TC17 118 aaPredicted RBP13.95□□□□□ -0.18
VPS26B-203ENST00000525918 RUNDC1Q96C34 613 aa13.95□□□□□ -0.18
VPS26B-203ENST00000525918 CAPNS2Q96L46 248 aa13.95□□□□□ -0.18
VPS26B-203ENST00000525918 RNF39Q9H2S5 420 aa13.95□□□□□ -0.18
VPS26B-203ENST00000525918 LAS1LQ9Y4W2 734 aaKnown RBP13.95□□□□□ -0.18
VPS26B-203ENST00000525918 LRRC37AA6NMS7 1700 aa13.95□□□□□ -0.18
VPS26B-203ENST00000525918 MYBBP1AQ9BQG0 1328 aaKnown RBP13.94□□□□□ -0.18
VPS26B-203ENST00000525918 TRAF5O00463 557 aa13.94□□□□□ -0.18
VPS26B-203ENST00000525918 HOXB7P09629 217 aa13.94□□□□□ -0.18
VPS26B-203ENST00000525918 HSPA8P11142 646 aaKnown RBP13.94□□□□□ -0.18
VPS26B-203ENST00000525918 GMPSP49915 693 aaPredicted RBP13.94□□□□□ -0.18
VPS26B-203ENST00000525918 KRT24Q2M2I5 525 aa13.94□□□□□ -0.18
VPS26B-203ENST00000525918 ANKRD13DQ6ZTN6 518 aa13.94□□□□□ -0.18
VPS26B-203ENST00000525918 PAXIP1Q6ZW49 1069 aaPredicted RBP13.94□□□□□ -0.18
VPS26B-203ENST00000525918 CCDC146Q8IYE0 955 aa13.94□□□□□ -0.18
VPS26B-203ENST00000525918 PLBD2Q8NHP8 589 aa13.94□□□□□ -0.18
VPS26B-203ENST00000525918 GPR101Q96P66 508 aaPredicted RBP13.94□□□□□ -0.18
VPS26B-203ENST00000525918 BEGAINQ9BUH8 593 aa13.94□□□□□ -0.18
VPS26B-203ENST00000525918 BCL2L13Q9BXK5 485 aa13.94□□□□□ -0.18
VPS26B-203ENST00000525918 CHPF2Q9P2E5 772 aa13.94□□□□□ -0.18
VPS26B-203ENST00000525918 PGAP2Q9UHJ9 254 aa13.94□□□□□ -0.18
VPS26B-203ENST00000525918 TRIM35Q9UPQ4 493 aa13.94□□□□□ -0.18
VPS26B-203ENST00000525918 TLL2Q9Y6L7 1015 aa13.94□□□□□ -0.18
VPS26B-203ENST00000525918 RAD17O75943 681 aa13.93□□□□□ -0.18
VPS26B-203ENST00000525918 HDGFL1Q5TGJ6 251 aa13.93□□□□□ -0.18
VPS26B-203ENST00000525918 CYP4F22Q6NT55 531 aa13.93□□□□□ -0.18
VPS26B-203ENST00000525918 ZC3H15Q8WU90 426 aaKnown RBP13.93□□□□□ -0.18
VPS26B-203ENST00000525918 DBF4Q9UBU7 674 aaPredicted RBP13.93□□□□□ -0.18
VPS26B-203ENST00000525918 MAP2K2P36507 400 aa13.92□□□□□ -0.18
VPS26B-203ENST00000525918 GRM1Q13255 1194 aa13.92□□□□□ -0.18
VPS26B-203ENST00000525918 WDR43Q15061 677 aaKnown RBP eCLIP13.92□□□□□ -0.18
VPS26B-203ENST00000525918 DUOX1Q9NRD9 1551 aa13.92□□□□□ -0.18
VPS26B-203ENST00000525918 YDJCA8MPS7 323 aa13.91□□□□□ -0.18
VPS26B-203ENST00000525918 CELF2O95319 508 aaKnown RBP13.91□□□□□ -0.18
VPS26B-203ENST00000525918 DDX10Q13206 875 aaKnown RBP13.91□□□□□ -0.18
VPS26B-203ENST00000525918 SF3B3Q15393 1217 aaKnown RBP13.91□□□□□ -0.18
VPS26B-203ENST00000525918 SAPCD2Q86UD0 394 aa13.91□□□□□ -0.18
VPS26B-203ENST00000525918 FAM89AQ96GI7 184 aa13.91□□□□□ -0.18
VPS26B-203ENST00000525918 HHIPL1Q96JK4 782 aa13.91□□□□□ -0.18
VPS26B-203ENST00000525918 ISCA1Q9BUE6 129 aa13.91□□□□□ -0.18
VPS26B-203ENST00000525918 GLIS2Q9BZE0 524 aaPredicted RBP13.91□□□□□ -0.18
VPS26B-203ENST00000525918 HYPKQ9NX55 129 aa13.91□□□□□ -0.18
VPS26B-203ENST00000525918 CNOT7Q9UIV1 285 aaKnown RBP13.91□□□□□ -0.18
VPS26B-203ENST00000525918 POLR2AP24928 1970 aaKnown RBP13.91□□□□□ -0.18
VPS26B-203ENST00000525918 H7C1D1 291 aa13.9□□□□□ -0.18
VPS26B-203ENST00000525918 HIRAP54198 1017 aaPredicted RBP13.9□□□□□ -0.18
VPS26B-203ENST00000525918 WASHC4Q2M389 1173 aa13.9□□□□□ -0.18
VPS26B-203ENST00000525918 CDC37L1Q7L3B6 337 aa13.9□□□□□ -0.18
VPS26B-203ENST00000525918 ZNF428Q96B54 188 aa13.9□□□□□ -0.18
VPS26B-203ENST00000525918 CFAP44Q96MT7 982 aa13.9□□□□□ -0.18
VPS26B-203ENST00000525918 RNF216Q9NWF9 866 aaPredicted RBP13.9□□□□□ -0.18
VPS26B-203ENST00000525918 NSFL1CQ9UNZ2 370 aaKnown RBP13.9□□□□□ -0.18
VPS26B-203ENST00000525918 ADAMTS8Q9UP79 889 aa13.9□□□□□ -0.18
VPS26B-203ENST00000525918 ATP5J2-PTCD1G3V325 749 aa13.89□□□□□ -0.19
VPS26B-203ENST00000525918 TRIM28Q13263 835 aaKnown RBP13.89□□□□□ -0.19
VPS26B-203ENST00000525918 DUSP27Q5VZP5 1158 aa13.89□□□□□ -0.19
VPS26B-203ENST00000525918 DPF2Q92785 391 aa13.89□□□□□ -0.19
VPS26B-203ENST00000525918 CELF1Q92879 486 aaKnown RBP13.89□□□□□ -0.19
VPS26B-203ENST00000525918 AOC2O75106 756 aa13.88□□□□□ -0.19
VPS26B-203ENST00000525918 MICALL2Q8IY33 904 aa13.88□□□□□ -0.19
VPS26B-203ENST00000525918 TRPM4Q8TD43 1214 aa13.88□□□□□ -0.19
VPS26B-203ENST00000525918 ABHD8Q96I13 439 aa13.88□□□□□ -0.19
VPS26B-203ENST00000525918 C6orf229H3BNL8 230 aa13.87□□□□□ -0.19
VPS26B-203ENST00000525918 PSMD14O00487 310 aa13.87□□□□□ -0.19
VPS26B-203ENST00000525918 RIMBP2O15034 1052 aa13.87□□□□□ -0.19
VPS26B-203ENST00000525918 RTL5Q5HYW3 569 aaPredicted RBP13.87□□□□□ -0.19
VPS26B-203ENST00000525918 EYA3Q99504 573 aa13.87□□□□□ -0.19
VPS26B-203ENST00000525918 ZNF408Q9H9D4 720 aa13.87□□□□□ -0.19
VPS26B-203ENST00000525918 MBIPQ9NS73 344 aa13.87□□□□□ -0.19
VPS26B-203ENST00000525918 POLLQ9UGP5 575 aa13.87□□□□□ -0.19
VPS26B-203ENST00000525918 ZBTB12Q9Y330 459 aaPredicted RBP13.87□□□□□ -0.19
VPS26B-203ENST00000525918 SHTN1A0MZ66 631 aa13.86□□□□□ -0.19
VPS26B-203ENST00000525918 IRS4O14654 1257 aaPredicted RBP13.86□□□□□ -0.19
VPS26B-203ENST00000525918 CA12O43570 354 aa13.86□□□□□ -0.19
VPS26B-203ENST00000525918 HSP90B1P14625 803 aaKnown RBP13.86□□□□□ -0.19
VPS26B-203ENST00000525918 RPS12P25398 132 aaKnown RBP13.86□□□□□ -0.19
VPS26B-203ENST00000525918 RPS8P62241 208 aaKnown RBP13.86□□□□□ -0.19
VPS26B-203ENST00000525918 GPSM2P81274 684 aa13.86□□□□□ -0.19
VPS26B-203ENST00000525918 RIC3Q7Z5B4 369 aa13.86□□□□□ -0.19
VPS26B-203ENST00000525918 DBNDD1Q9H9R9 158 aa13.86□□□□□ -0.19
VPS26B-203ENST00000525918 COL4A1P02462 1669 aa13.85□□□□□ -0.19
VPS26B-203ENST00000525918 ZNF853P0CG23 659 aa13.85□□□□□ -0.19
VPS26B-203ENST00000525918 BRPF1P55201 1214 aaPredicted RBP13.85□□□□□ -0.19
VPS26B-203ENST00000525918 GOLGA2Q08379 1002 aa13.85□□□□□ -0.19
VPS26B-203ENST00000525918 SAMD7Q7Z3H4 446 aa13.85□□□□□ -0.19
VPS26B-203ENST00000525918 USP48Q86UV5 1035 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms