RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 USP17L10C9JJH3 530 aa8.34□□□□□ -1.07
SVIP-202ENST00000525670 USP17L13C9JLJ4 530 aa8.34□□□□□ -1.07
SVIP-202ENST00000525670 USP17L12C9JPN9 530 aa8.34□□□□□ -1.07
SVIP-202ENST00000525670 USP17L11C9JVI0 530 aa8.34□□□□□ -1.07
SVIP-202ENST00000525670 USP17L21D6R901 530 aa8.34□□□□□ -1.07
SVIP-202ENST00000525670 USP17L18D6R9N7 530 aa8.34□□□□□ -1.07
SVIP-202ENST00000525670 USP17L22D6RA61 530 aa8.34□□□□□ -1.07
SVIP-202ENST00000525670 USP17L17D6RBQ6 530 aa8.34□□□□□ -1.07
SVIP-202ENST00000525670 USP17L19D6RCP7 530 aa8.34□□□□□ -1.07
SVIP-202ENST00000525670 USP17L20D6RJB6 530 aa8.34□□□□□ -1.07
SVIP-202ENST00000525670 USP17L24Q0WX57 530 aa8.34□□□□□ -1.07
SVIP-202ENST00000525670 TNFRSF25Q93038 417 aa8.34□□□□□ -1.07
SVIP-202ENST00000525670 TSPOAP1O95153 1857 aa8.33□□□□□ -1.08
SVIP-202ENST00000525670 IGFBP4P22692 258 aa8.33□□□□□ -1.08
SVIP-202ENST00000525670 BTLAQ7Z6A9 289 aa8.33□□□□□ -1.08
SVIP-202ENST00000525670 TRIM11Q96F44 468 aa8.33□□□□□ -1.08
SVIP-202ENST00000525670 NGLY1Q96IV0 654 aa8.33□□□□□ -1.08
SVIP-202ENST00000525670 PLVAPQ9BX97 442 aa8.33□□□□□ -1.08
SVIP-202ENST00000525670 UACAQ9BZF9 1416 aa8.33□□□□□ -1.08
SVIP-202ENST00000525670 ZNF777Q9ULD5 760 aaPredicted RBP8.33□□□□□ -1.08
SVIP-202ENST00000525670 KIF13AQ9H1H9 1805 aa8.33□□□□□ -1.08
SVIP-202ENST00000525670 ABCA8O94911 1581 aa8.32□□□□□ -1.08
SVIP-202ENST00000525670 RTN1Q16799 776 aa8.32□□□□□ -1.08
SVIP-202ENST00000525670 ARXQ96QS3 562 aa8.32□□□□□ -1.08
SVIP-202ENST00000525670 RAPGEF6Q8TEU7 1601 aa8.32□□□□□ -1.08
SVIP-202ENST00000525670 ARHGAP35Q9NRY4 1499 aa8.32□□□□□ -1.08
SVIP-202ENST00000525670 EFCAB5A4FU69 1503 aa8.31□□□□□ -1.08
SVIP-202ENST00000525670 CFAP70Q5T0N1 1121 aa8.31□□□□□ -1.08
SVIP-202ENST00000525670 IER5Q5VY09 327 aa8.31□□□□□ -1.08
SVIP-202ENST00000525670 EFCC1Q9HA90 598 aa8.31□□□□□ -1.08
SVIP-202ENST00000525670 DIP2BQ9P265 1576 aa8.31□□□□□ -1.08
SVIP-202ENST00000525670 LOC105371045A0A1W2PR82 267 aa8.3□□□□□ -1.08
SVIP-202ENST00000525670 C1QTNF9BB2RNN3 333 aa8.3□□□□□ -1.08
SVIP-202ENST00000525670 ADAM23O75077 832 aa8.3□□□□□ -1.08
SVIP-202ENST00000525670 LGR5O75473 907 aa8.3□□□□□ -1.08
SVIP-202ENST00000525670 BAG6P46379 1132 aa8.3□□□□□ -1.08
SVIP-202ENST00000525670 RAB44Q7Z6P3 723 aaPredicted RBP8.3□□□□□ -1.08
SVIP-202ENST00000525670 CD163Q86VB7 1156 aa8.3□□□□□ -1.08
SVIP-202ENST00000525670 PRDM6Q9NQX0 595 aa8.3□□□□□ -1.08
SVIP-202ENST00000525670 STARD13Q9Y3M8 1113 aa8.3□□□□□ -1.08
SVIP-202ENST00000525670 PCF11O94913 1555 aaKnown RBP8.3□□□□□ -1.08
SVIP-202ENST00000525670 SPDYE3A6NKU9 549 aa8.29□□□□□ -1.08
SVIP-202ENST00000525670 M0R082 166 aa8.29□□□□□ -1.08
SVIP-202ENST00000525670 ADH7P40394 386 aa8.29□□□□□ -1.08
SVIP-202ENST00000525670 ZNF417Q8TAU3 575 aa8.29□□□□□ -1.08
SVIP-202ENST00000525670 BHMTQ93088 406 aa8.29□□□□□ -1.08
SVIP-202ENST00000525670 ZNF587Q96SQ5 575 aaPredicted RBP8.29□□□□□ -1.08
SVIP-202ENST00000525670 MAPKBP1O60336 1514 aa8.29□□□□□ -1.08
SVIP-202ENST00000525670 CDK13Q14004 1512 aaKnown RBP8.29□□□□□ -1.08
SVIP-202ENST00000525670 ASXL2Q76L83 1435 aa8.29□□□□□ -1.08
SVIP-202ENST00000525670 TGFBR3LH3BV60 316 aa8.28□□□□□ -1.08
SVIP-202ENST00000525670 SPATA31C1P0DKV0 1188 aa8.28□□□□□ -1.08
SVIP-202ENST00000525670 WEE1P30291 646 aa8.28□□□□□ -1.08
SVIP-202ENST00000525670 MICALL1Q8N3F8 863 aa8.28□□□□□ -1.08
SVIP-202ENST00000525670 FAM200AQ8TCP9 573 aa8.28□□□□□ -1.08
SVIP-202ENST00000525670 DMGDHQ9UI17 866 aaKnown RBP8.28□□□□□ -1.08
SVIP-202ENST00000525670 BCS1LQ9Y276 419 aa8.28□□□□□ -1.08
SVIP-202ENST00000525670 CLIP1P30622 1438 aa8.28□□□□□ -1.08
SVIP-202ENST00000525670 UHRF1BP1LA0JNW5 1464 aa8.27□□□□□ -1.09
SVIP-202ENST00000525670 LRRIQ1Q96JM4 1722 aa8.27□□□□□ -1.09
SVIP-202ENST00000525670 CHRNA4P43681 627 aa8.27□□□□□ -1.09
SVIP-202ENST00000525670 COL9A3Q14050 684 aaPredicted RBP8.27□□□□□ -1.09
SVIP-202ENST00000525670 GSX2Q9BZM3 304 aa8.27□□□□□ -1.09
SVIP-202ENST00000525670 NUP153P49790 1475 aaKnown RBP8.26□□□□□ -1.09
SVIP-202ENST00000525670 KDM5BQ9UGL1 1544 aa8.26□□□□□ -1.09
SVIP-202ENST00000525670 FOXO3O43524 673 aa8.26□□□□□ -1.09
SVIP-202ENST00000525670 ALBP02768 609 aa8.26□□□□□ -1.09
SVIP-202ENST00000525670 RFX1P22670 979 aa8.26□□□□□ -1.09
SVIP-202ENST00000525670 FAM69CQ0P6D2 419 aa8.26□□□□□ -1.09
SVIP-202ENST00000525670 C20orf204Q6ZNR8 217 aa8.26□□□□□ -1.09
SVIP-202ENST00000525670 CEP162Q5TB80 1403 aa8.26□□□□□ -1.09
SVIP-202ENST00000525670 HECW1Q76N89 1606 aa8.25□□□□□ -1.09
SVIP-202ENST00000525670 K7ELQ4 463 aaPredicted RBP8.25□□□□□ -1.09
SVIP-202ENST00000525670 CCINQ13939 588 aa8.25□□□□□ -1.09
SVIP-202ENST00000525670 CDCA8Q53HL2 280 aa8.25□□□□□ -1.09
SVIP-202ENST00000525670 PRRT3Q5FWE3 981 aa8.25□□□□□ -1.09
SVIP-202ENST00000525670 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.25□□□□□ -1.091e-8■■■■■ 149.1
SVIP-202ENST00000525670 ABCC10Q5T3U5 1492 aa8.25□□□□□ -1.09
SVIP-202ENST00000525670 WDR7Q9Y4E6 1490 aa8.25□□□□□ -1.09
SVIP-202ENST00000525670 C8orf86Q6ZUL3 223 aa8.24□□□□□ -1.09
SVIP-202ENST00000525670 VTI1AQ96AJ9 217 aa8.24□□□□□ -1.09
SVIP-202ENST00000525670 PNMA5Q96PV4 448 aa8.24□□□□□ -1.09
SVIP-202ENST00000525670 UBE2OQ9C0C9 1292 aaKnown RBP8.24□□□□□ -1.09
SVIP-202ENST00000525670 QTRT2Q9H974 415 aaKnown RBP8.24□□□□□ -1.09
SVIP-202ENST00000525670 KLK14Q9P0G3 267 aa8.24□□□□□ -1.09
SVIP-202ENST00000525670 LILRB5O75023 590 aa8.23□□□□□ -1.09
SVIP-202ENST00000525670 FURINP09958 794 aa8.23□□□□□ -1.09
SVIP-202ENST00000525670 NID1P14543 1247 aa8.23□□□□□ -1.09
SVIP-202ENST00000525670 EPB42P16452 691 aa8.23□□□□□ -1.09
SVIP-202ENST00000525670 INPP5BP32019 993 aa8.23□□□□□ -1.09
SVIP-202ENST00000525670 TBC1D8BQ0IIM8 1120 aa8.23□□□□□ -1.09
SVIP-202ENST00000525670 TRIM28Q13263 835 aaKnown RBP8.23□□□□□ -1.09
SVIP-202ENST00000525670 C11orf91Q3C1V1 193 aa8.23□□□□□ -1.09
SVIP-202ENST00000525670 MYO19Q96H55 970 aa8.23□□□□□ -1.09
SVIP-202ENST00000525670 IGFLR1Q9H665 355 aa8.23□□□□□ -1.09
SVIP-202ENST00000525670 C11orf16Q9NQ32 467 aa8.23□□□□□ -1.09
SVIP-202ENST00000525670 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.23□□□□□ -1.09
SVIP-202ENST00000525670 ATP10BO94823 1461 aa8.23□□□□□ -1.09
SVIP-202ENST00000525670 EPRSP07814 1512 aaKnown RBP8.23□□□□□ -1.09
SVIP-202ENST00000525670 PPRC1Q5VV67 1664 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms