RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 SASH3O75995 380 aa13.21□□□□□ -0.29
CLNS1A-204ENST00000525428 GNL2Q13823 731 aaKnown RBP13.21□□□□□ -0.29
CLNS1A-204ENST00000525428 SMC1AQ14683 1233 aaKnown RBP13.21□□□□□ -0.29
CLNS1A-204ENST00000525428 HSP90AB2PQ58FF8 381 aa13.21□□□□□ -0.29
CLNS1A-204ENST00000525428 MNS1Q8NEH6 495 aa13.21□□□□□ -0.29
CLNS1A-204ENST00000525428 JRKLQ9Y4A0 524 aa13.21□□□□□ -0.29
CLNS1A-204ENST00000525428 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.21□□□□□ -0.296e-10■■□□□ 11.4
CLNS1A-204ENST00000525428 CEBPZQ03701 1054 aaKnown RBP13.2□□□□□ -0.3
CLNS1A-204ENST00000525428 SKIDA1Q1XH10 827 aa13.2□□□□□ -0.3
CLNS1A-204ENST00000525428 C11orf57Q6ZUT1 292 aaPredicted RBP13.2□□□□□ -0.3
CLNS1A-204ENST00000525428 FAM177A1Q8N128 213 aaPredicted RBP13.2□□□□□ -0.3
CLNS1A-204ENST00000525428 ERCC4Q92889 916 aaPredicted RBP13.2□□□□□ -0.3
CLNS1A-204ENST00000525428 LTV1Q96GA3 475 aaPredicted RBP13.2□□□□□ -0.3
CLNS1A-204ENST00000525428 OSBPL3Q9H4L5 887 aa13.2□□□□□ -0.3
CLNS1A-204ENST00000525428 DNAI1Q9UI46 699 aa13.2□□□□□ -0.3
CLNS1A-204ENST00000525428 ZRANB2O95218 330 aaKnown RBP eCLIP13.2□□□□□ -0.3
CLNS1A-204ENST00000525428 PSEN1P49768 467 aa13.2□□□□□ -0.3
CLNS1A-204ENST00000525428 GOLGA6L1Q8N7Z2 621 aa13.2□□□□□ -0.3
CLNS1A-204ENST00000525428 LRRCC1Q9C099 1032 aa13.2□□□□□ -0.3
CLNS1A-204ENST00000525428 ADGRL3Q9HAR2 1447 aa13.2□□□□□ -0.3
CLNS1A-204ENST00000525428 NUTM1Q86Y26 1132 aa13.2□□□□□ -0.3
CLNS1A-204ENST00000525428 MYCBPQ99417 103 aaPredicted RBP13.2□□□□□ -0.3
CLNS1A-204ENST00000525428 USP32Q8NFA0 1604 aa13.2□□□□□ -0.3
CLNS1A-204ENST00000525428 URI1O94763 535 aaPredicted RBP13.19□□□□□ -0.3
CLNS1A-204ENST00000525428 PACS2Q86VP3 889 aa13.19□□□□□ -0.3
CLNS1A-204ENST00000525428 TTC14Q96N46 770 aa13.19□□□□□ -0.3
CLNS1A-204ENST00000525428 RNF216Q9NWF9 866 aaPredicted RBP13.19□□□□□ -0.3
CLNS1A-204ENST00000525428 CWC27Q6UX04 472 aaKnown RBP13.19□□□□□ -0.3
CLNS1A-204ENST00000525428 ATG3Q9NT62 314 aa13.19□□□□□ -0.3
CLNS1A-204ENST00000525428 ORC3Q9UBD5 711 aaPredicted RBP13.19□□□□□ -0.3
CLNS1A-204ENST00000525428 CDC42BPGQ6DT37 1551 aa13.18□□□□□ -0.3
CLNS1A-204ENST00000525428 E4F1Q66K89 784 aaPredicted RBP13.18□□□□□ -0.3
CLNS1A-204ENST00000525428 CABLES1Q8TDN4 633 aa13.18□□□□□ -0.3
CLNS1A-204ENST00000525428 PPP1R13BQ96KQ4 1090 aa13.18□□□□□ -0.3
CLNS1A-204ENST00000525428 NSD2O96028 1365 aa13.18□□□□□ -0.3
CLNS1A-204ENST00000525428 NEMFO60524 1076 aa13.18□□□□□ -0.3
CLNS1A-204ENST00000525428 LMOD3Q0VAK6 560 aa13.18□□□□□ -0.3
CLNS1A-204ENST00000525428 TTC31Q49AM3 519 aaPredicted RBP13.18□□□□□ -0.3
CLNS1A-204ENST00000525428 FOXR1Q6PIV2 292 aa13.18□□□□□ -0.3
CLNS1A-204ENST00000525428 AK7Q96M32 723 aa13.18□□□□□ -0.3
CLNS1A-204ENST00000525428 NCAPGQ9BPX3 1015 aa13.18□□□□□ -0.3
CLNS1A-204ENST00000525428 CARD6Q9BX69 1037 aa13.18□□□□□ -0.3
CLNS1A-204ENST00000525428 CLSTN2Q9H4D0 955 aa13.18□□□□□ -0.3
CLNS1A-204ENST00000525428 L2HGDHQ9H9P8 463 aa13.18□□□□□ -0.3
CLNS1A-204ENST00000525428 ADAM21Q9UKJ8 722 aa13.18□□□□□ -0.3
CLNS1A-204ENST00000525428 IFIT2P09913 472 aaKnown RBP13.17□□□□□ -0.3
CLNS1A-204ENST00000525428 REXO1L1PQ8IX06 675 aa13.17□□□□□ -0.3
CLNS1A-204ENST00000525428 FBXO18Q8NFZ0 1043 aa13.17□□□□□ -0.3
CLNS1A-204ENST00000525428 TCEANC2Q96MN5 208 aa13.17□□□□□ -0.3
CLNS1A-204ENST00000525428 JAKMIP1Q96N16 626 aaKnown RBP13.17□□□□□ -0.3
CLNS1A-204ENST00000525428 NALCNQ8IZF0 1738 aa13.17□□□□□ -0.3
CLNS1A-204ENST00000525428 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
CLNS1A-204ENST00000525428 GUCY2CP25092 1073 aa13.17□□□□□ -0.3
CLNS1A-204ENST00000525428 ADCK5Q3MIX3 580 aa13.17□□□□□ -0.3
CLNS1A-204ENST00000525428 PDRG1Q9NUG6 133 aa13.17□□□□□ -0.3
CLNS1A-204ENST00000525428 HYPKQ9NX55 129 aa13.17□□□□□ -0.3
CLNS1A-204ENST00000525428 A0A1B0GUL7 405 aa13.17□□□□□ -0.3
CLNS1A-204ENST00000525428 CTR9Q6PD62 1173 aa13.17□□□□□ -0.3
CLNS1A-204ENST00000525428 KRT28Q7Z3Y7 464 aa13.17□□□□□ -0.3
CLNS1A-204ENST00000525428 GOLGA5Q8TBA6 731 aa13.17□□□□□ -0.3
CLNS1A-204ENST00000525428 DDX19AQ9NUU7 478 aaKnown RBP13.17□□□□□ -0.3
CLNS1A-204ENST00000525428 MAP3K19Q56UN5 1328 aa13.16□□□□□ -0.3
CLNS1A-204ENST00000525428 PNMA6EA0A0J9YXQ4 647 aa13.16□□□□□ -0.3
CLNS1A-204ENST00000525428 TBC1D8O95759 1140 aa13.16□□□□□ -0.3
CLNS1A-204ENST00000525428 ME3Q16798 604 aa13.16□□□□□ -0.3
CLNS1A-204ENST00000525428 IQCB1Q15051 598 aa13.16□□□□□ -0.3
CLNS1A-204ENST00000525428 CT47A1Q5JQC4 288 aaPredicted RBP13.16□□□□□ -0.3
CLNS1A-204ENST00000525428 MRFAP1L1Q96HT8 127 aa13.16□□□□□ -0.3
CLNS1A-204ENST00000525428 FMNL2Q96PY5 1086 aa13.16□□□□□ -0.3
CLNS1A-204ENST00000525428 ZNF853P0CG23 659 aa13.15□□□□□ -0.3
CLNS1A-204ENST00000525428 AMPHP49418 695 aa13.15□□□□□ -0.3
CLNS1A-204ENST00000525428 MMP14P50281 582 aa13.15□□□□□ -0.3
CLNS1A-204ENST00000525428 EVCP57679 992 aa13.15□□□□□ -0.3
CLNS1A-204ENST00000525428 CCDC93Q567U6 631 aa13.15□□□□□ -0.3
CLNS1A-204ENST00000525428 LEO1Q8WVC0 666 aaPredicted RBP13.15□□□□□ -0.3
CLNS1A-204ENST00000525428 PLEKHA4Q9H4M7 779 aa13.15□□□□□ -0.3
CLNS1A-204ENST00000525428 STRCP1A6NGW2 1772 aa13.15□□□□□ -0.3
CLNS1A-204ENST00000525428 KIF2AO00139 706 aaPredicted RBP13.15□□□□□ -0.3
CLNS1A-204ENST00000525428 GNAI3P08754 354 aa13.15□□□□□ -0.3
CLNS1A-204ENST00000525428 CDC25BP30305 580 aa13.15□□□□□ -0.3
CLNS1A-204ENST00000525428 STK3Q13188 491 aa13.15□□□□□ -0.3
CLNS1A-204ENST00000525428 NOM1Q5C9Z4 860 aaKnown RBP13.15□□□□□ -0.3
CLNS1A-204ENST00000525428 LEKR1Q6ZMV7 388 aa13.15□□□□□ -0.3
CLNS1A-204ENST00000525428 DDX11Q96FC9 970 aa13.15□□□□□ -0.3
CLNS1A-204ENST00000525428 SMC2O95347 1197 aa13.14□□□□□ -0.31
CLNS1A-204ENST00000525428 ST3GAL1Q11201 340 aa13.14□□□□□ -0.31
CLNS1A-204ENST00000525428 PRPF40BQ6NWY9 871 aaKnown RBP13.14□□□□□ -0.31
CLNS1A-204ENST00000525428 PGBD1Q96JS3 809 aa13.14□□□□□ -0.31
CLNS1A-204ENST00000525428 DEF6Q9H4E7 631 aa13.14□□□□□ -0.31
CLNS1A-204ENST00000525428 MIS18AQ9NYP9 233 aa13.14□□□□□ -0.31
CLNS1A-204ENST00000525428 STRCQ7RTU9 1775 aa13.14□□□□□ -0.31
CLNS1A-204ENST00000525428 ZC3H6P61129 1189 aaKnown RBP13.14□□□□□ -0.31
CLNS1A-204ENST00000525428 TMC6Q7Z403 805 aa13.14□□□□□ -0.31
CLNS1A-204ENST00000525428 AOPEPQ8N6M6 819 aa13.14□□□□□ -0.31
CLNS1A-204ENST00000525428 VPS18Q9P253 973 aa13.14□□□□□ -0.31
CLNS1A-204ENST00000525428 NPHP3Q7Z494 1330 aa13.14□□□□□ -0.31
CLNS1A-204ENST00000525428 SSH2Q76I76 1423 aa13.14□□□□□ -0.31
CLNS1A-204ENST00000525428 ACTN2P35609 894 aa13.14□□□□□ -0.31
CLNS1A-204ENST00000525428 FOSBP53539 338 aa13.14□□□□□ -0.31
CLNS1A-204ENST00000525428 COL9A3Q14050 684 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms