RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 AOC2O75106 756 aa33.97■■■■□ 3.03
PVT1-219ENST00000523427 CELF2O95319 508 aaKnown RBP33.97■■■■□ 3.03
PVT1-219ENST00000523427 TMPOP42166 694 aaKnown RBP33.97■■■■□ 3.03
PVT1-219ENST00000523427 ABHD8Q96I13 439 aa33.97■■■■□ 3.03
PVT1-219ENST00000523427 RTFDC1Q9BY42 306 aaPredicted RBP33.97■■■■□ 3.03
PVT1-219ENST00000523427 GLIS2Q9BZE0 524 aaPredicted RBP33.97■■■■□ 3.03
PVT1-219ENST00000523427 TSKSQ9UJT2 592 aa33.97■■■■□ 3.03
PVT1-219ENST00000523427 LAS1LQ9Y4W2 734 aaKnown RBP33.97■■■■□ 3.03
PVT1-219ENST00000523427 TLL2Q9Y6L7 1015 aa33.97■■■■□ 3.03
PVT1-219ENST00000523427 KRT24Q2M2I5 525 aa33.96■■■■□ 3.03
PVT1-219ENST00000523427 ZNF408Q9H9D4 720 aa33.96■■■■□ 3.03
PVT1-219ENST00000523427 TCIRG1Q13488 830 aa33.95■■■■□ 3.03
PVT1-219ENST00000523427 CCDC146Q8IYE0 955 aa33.94■■■■□ 3.02
PVT1-219ENST00000523427 SH3TC1Q8TE82 1336 aa33.94■■■■□ 3.02
PVT1-219ENST00000523427 LMOD3Q0VAK6 560 aa33.93■■■■□ 3.02
PVT1-219ENST00000523427 KIAA2012Q0VF49 1180 aa33.93■■■■□ 3.02
PVT1-219ENST00000523427 GRAPQ13588 217 aa33.93■■■■□ 3.02
PVT1-219ENST00000523427 GRAPLQ8TC17 118 aaPredicted RBP33.93■■■■□ 3.02
PVT1-219ENST00000523427 TNIP1Q15025 636 aa33.92■■■■□ 3.02
PVT1-219ENST00000523427 BABAM1Q9NWV8 329 aa33.92■■■■□ 3.02
PVT1-219ENST00000523427 TRPM7Q96QT4 1865 aa33.9■■■■□ 3.02
PVT1-219ENST00000523427 SHTN1A0MZ66 631 aa33.9■■■■□ 3.02
PVT1-219ENST00000523427 TRPM4Q8TD43 1214 aa33.9■■■■□ 3.02
PVT1-219ENST00000523427 HIRAP54198 1017 aaPredicted RBP33.89■■■■□ 3.02
PVT1-219ENST00000523427 SAPCD2Q86UD0 394 aa33.89■■■■□ 3.02
PVT1-219ENST00000523427 CHPF2Q9P2E5 772 aa33.89■■■■□ 3.02
PVT1-219ENST00000523427 CNOT7Q9UIV1 285 aaKnown RBP33.89■■■■□ 3.02
PVT1-219ENST00000523427 YDJCA8MPS7 323 aa33.87■■■■□ 3.01
PVT1-219ENST00000523427 LAMB2P55268 1798 aa33.87■■■■□ 3.01
PVT1-219ENST00000523427 CCDC85CA6NKD9 419 aa33.86■■■■□ 3.01
PVT1-219ENST00000523427 MAP2K2P36507 400 aa33.86■■■■□ 3.01
PVT1-219ENST00000523427 RTL5Q5HYW3 569 aaPredicted RBP33.86■■■■□ 3.01
PVT1-219ENST00000523427 ZBTB12Q9Y330 459 aaPredicted RBP33.86■■■■□ 3.01
PVT1-219ENST00000523427 TAF1P21675 1872 aa33.85■■■■□ 3.01
PVT1-219ENST00000523427 ATP5J2-PTCD1G3V325 749 aa33.85■■■■□ 3.01
PVT1-219ENST00000523427 RIMBP2O15034 1052 aa33.85■■■■□ 3.01
PVT1-219ENST00000523427 NSFL1CQ9UNZ2 370 aaKnown RBP33.85■■■■□ 3.01
PVT1-219ENST00000523427 H7C1D1 291 aa33.84■■■■□ 3.01
PVT1-219ENST00000523427 RALBP1Q15311 655 aa33.84■■■■□ 3.01
PVT1-219ENST00000523427 CDC37L1Q7L3B6 337 aa33.84■■■■□ 3.01
PVT1-219ENST00000523427 FAM89AQ96GI7 184 aa33.84■■■■□ 3.01
PVT1-219ENST00000523427 PGAP2Q9UHJ9 254 aa33.84■■■■□ 3.01
PVT1-219ENST00000523427 ANKRD36CQ5JPF3 1778 aa33.84■■■■□ 3.01
PVT1-219ENST00000523427 CHL1O00533 1208 aa33.83■■■■□ 3.01
PVT1-219ENST00000523427 HDGFL1Q5TGJ6 251 aa33.83■■■■□ 3.01
PVT1-219ENST00000523427 DLK2Q6UY11 383 aa33.83■■■■□ 3.01
PVT1-219ENST00000523427 USP48Q86UV5 1035 aa33.83■■■■□ 3.01
PVT1-219ENST00000523427 MICALL2Q8IY33 904 aa33.83■■■■□ 3.01
PVT1-219ENST00000523427 DBNDD1Q9H9R9 158 aa33.83■■■■□ 3.01
PVT1-219ENST00000523427 CDHR2Q9BYE9 1310 aa33.82■■■■□ 3.01
PVT1-219ENST00000523427 C6orf229H3BNL8 230 aa33.82■■■■□ 3
PVT1-219ENST00000523427 WASHC4Q2M389 1173 aa33.82■■■■□ 3
PVT1-219ENST00000523427 FAM161AQ3B820 660 aa33.82■■■■□ 3
PVT1-219ENST00000523427 ZC3H15Q8WU90 426 aaKnown RBP33.82■■■■□ 3
PVT1-219ENST00000523427 CELF1Q92879 486 aaKnown RBP33.82■■■■□ 3
PVT1-219ENST00000523427 THSD7BQ9C0I4 1608 aa33.82■■■■□ 3
PVT1-219ENST00000523427 ANKRD13DQ6ZTN6 518 aa33.81■■■■□ 3
PVT1-219ENST00000523427 PLBD2Q8NHP8 589 aa33.81■■■■□ 3
PVT1-219ENST00000523427 SAMD7Q7Z3H4 446 aa33.8■■■■□ 3
PVT1-219ENST00000523427 TMC4Q7Z404 712 aa33.8■■■■□ 3
PVT1-219ENST00000523427 PSMD14O00487 310 aa33.79■■■■□ 3
PVT1-219ENST00000523427 RBM26Q5T8P6 1007 aaKnown RBP33.79■■■■□ 3
PVT1-219ENST00000523427 TBC1D10BQ4KMP7 808 aaPredicted RBP33.78■■■■□ 3
PVT1-219ENST00000523427 TRIM35Q9UPQ4 493 aa33.78■■■■□ 3
PVT1-219ENST00000523427 DOK7Q18PE1 504 aa33.77■■■■□ 3
PVT1-219ENST00000523427 CFAP44Q96MT7 982 aa33.77■■■■□ 3
PVT1-219ENST00000523427 ISCA1Q9BUE6 129 aa33.77■■■■□ 3
PVT1-219ENST00000523427 GPSM2P81274 684 aa33.76■■■□□ 2.99
PVT1-219ENST00000523427 DUOX1Q9NRD9 1551 aa33.76■■■□□ 2.99
PVT1-219ENST00000523427 HUNKP57058 714 aa33.75■■■□□ 2.99
PVT1-219ENST00000523427 WDR43Q15061 677 aaKnown RBP eCLIP33.75■■■□□ 2.99
PVT1-219ENST00000523427 RUNDC1Q96C34 613 aa33.75■■■□□ 2.99
PVT1-219ENST00000523427 HHIPL1Q96JK4 782 aa33.75■■■□□ 2.99
PVT1-219ENST00000523427 KCNQ5Q9NR82 932 aa33.75■■■□□ 2.99
PVT1-219ENST00000523427 DBF4Q9UBU7 674 aaPredicted RBP33.75■■■□□ 2.99
PVT1-219ENST00000523427 POLLQ9UGP5 575 aa33.75■■■□□ 2.99
PVT1-219ENST00000523427 SF3B3Q15393 1217 aaKnown RBP33.74■■■□□ 2.99
PVT1-219ENST00000523427 ZIC5Q96T25 663 aa33.74■■■□□ 2.99
PVT1-219ENST00000523427 EGFRP00533 1210 aa33.73■■■□□ 2.99
PVT1-219ENST00000523427 BRPF1P55201 1214 aaPredicted RBP33.73■■■□□ 2.99
PVT1-219ENST00000523427 IRS4O14654 1257 aaPredicted RBP33.72■■■□□ 2.99
PVT1-219ENST00000523427 CA12O43570 354 aa33.72■■■□□ 2.99
PVT1-219ENST00000523427 ECE2O60344 883 aa33.72■■■□□ 2.99
PVT1-219ENST00000523427 DDX10Q13206 875 aaKnown RBP33.72■■■□□ 2.99
PVT1-219ENST00000523427 KRT26Q7Z3Y9 468 aa33.72■■■□□ 2.99
PVT1-219ENST00000523427 DPF2Q92785 391 aa33.72■■■□□ 2.99
PVT1-219ENST00000523427 DUSP27Q5VZP5 1158 aa33.71■■■□□ 2.99
PVT1-219ENST00000523427 MYBBP1AQ9BQG0 1328 aaKnown RBP33.71■■■□□ 2.99
PVT1-219ENST00000523427 EYA3Q99504 573 aa33.7■■■□□ 2.99
PVT1-219ENST00000523427 MCOLN1Q9GZU1 580 aa33.7■■■□□ 2.99
PVT1-219ENST00000523427 HYPKQ9NX55 129 aa33.7■■■□□ 2.99
PVT1-219ENST00000523427 DDX60Q8IY21 1712 aaKnown RBP33.7■■■□□ 2.98
PVT1-219ENST00000523427 ADM5C9JUS6 153 aa33.68■■■□□ 2.98
PVT1-219ENST00000523427 G3V3G9 751 aa33.68■■■□□ 2.98
PVT1-219ENST00000523427 RPS8P62241 208 aaKnown RBP33.68■■■□□ 2.98
PVT1-219ENST00000523427 NOGQ13253 232 aa33.68■■■□□ 2.98
PVT1-219ENST00000523427 DCAF8Q5TAQ9 597 aa33.68■■■□□ 2.98
PVT1-219ENST00000523427 RIC3Q7Z5B4 369 aa33.68■■■□□ 2.98
PVT1-219ENST00000523427 TBC1D16Q8TBP0 767 aa33.68■■■□□ 2.98
PVT1-219ENST00000523427 DCPSQ96C86 337 aaKnown RBP33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms