RNA–Protein interactions for RNA: ENST00000523263.1

VIRMA-208, Transcript of vir like m6A methyltransferase associated, human

TSL 3

Gene VIRMA, Length 609 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VIRMA-208	ENST00000523263	SLC51A	Q86UW1	340 aa		12.52	□□□□□ -0.41
VIRMA-208	ENST00000523263	BCL2L13	Q9BXK5	485 aa		12.52	□□□□□ -0.41
VIRMA-208	ENST00000523263	CNOT7	Q9UIV1	285 aa	Known RBP	12.52	□□□□□ -0.41
VIRMA-208	ENST00000523263	ABCC4	O15439	1325 aa		12.52	□□□□□ -0.41
VIRMA-208	ENST00000523263	TRPM7	Q96QT4	1865 aa		12.52	□□□□□ -0.41
VIRMA-208	ENST00000523263	MYL6B	P14649	208 aa		12.51	□□□□□ -0.41
VIRMA-208	ENST00000523263	CCDC102A	Q96A19	550 aa		12.51	□□□□□ -0.41
VIRMA-208	ENST00000523263	FAM155A	B1AL88	458 aa	Predicted RBP	12.5	□□□□□ -0.41
VIRMA-208	ENST00000523263	NEFM	P07197	916 aa		12.5	□□□□□ -0.41
VIRMA-208	ENST00000523263	HUNK	P57058	714 aa		12.5	□□□□□ -0.41
VIRMA-208	ENST00000523263	PDIA6	Q15084	440 aa		12.5	□□□□□ -0.41
VIRMA-208	ENST00000523263	HSP90AB3P	Q58FF7	597 aa		12.5	□□□□□ -0.41
VIRMA-208	ENST00000523263	RGMB	Q6NW40	437 aa		12.5	□□□□□ -0.41
VIRMA-208	ENST00000523263	CCER1	Q8TC90	406 aa	Predicted RBP	12.5	□□□□□ -0.41
VIRMA-208	ENST00000523263	TRPM4	Q8TD43	1214 aa		12.5	□□□□□ -0.41
VIRMA-208	ENST00000523263	LAMB4	A4D0S4	1761 aa		12.5	□□□□□ -0.41
VIRMA-208	ENST00000523263	YDJC	A8MPS7	323 aa		12.49	□□□□□ -0.41
VIRMA-208	ENST00000523263	RAD17	O75943	681 aa		12.49	□□□□□ -0.41
VIRMA-208	ENST00000523263	GRAP	Q13588	217 aa		12.49	□□□□□ -0.41
VIRMA-208	ENST00000523263	CNGB1	Q14028	1251 aa	Predicted RBP	12.49	□□□□□ -0.41
VIRMA-208	ENST00000523263	DDX46	Q7L014	1031 aa	Known RBP	12.49	□□□□□ -0.41
VIRMA-208	ENST00000523263	USP48	Q86UV5	1035 aa		12.49	□□□□□ -0.41
VIRMA-208	ENST00000523263	REM2	Q8IYK8	340 aa	Predicted RBP	12.49	□□□□□ -0.41
VIRMA-208	ENST00000523263	GRAPL	Q8TC17	118 aa	Predicted RBP	12.49	□□□□□ -0.41
VIRMA-208	ENST00000523263	CFAP44	Q96MT7	982 aa		12.49	□□□□□ -0.41
VIRMA-208	ENST00000523263	PLEKHF1	Q96S99	279 aa		12.49	□□□□□ -0.41
VIRMA-208	ENST00000523263	ZIC5	Q96T25	663 aa		12.49	□□□□□ -0.41
VIRMA-208	ENST00000523263	ZNF408	Q9H9D4	720 aa		12.49	□□□□□ -0.41
VIRMA-208	ENST00000523263	BABAM1	Q9NWV8	329 aa		12.49	□□□□□ -0.41
VIRMA-208	ENST00000523263	RPS12	P25398	132 aa	Known RBP	12.48	□□□□□ -0.41
VIRMA-208	ENST00000523263	NFE2L2	Q16236	605 aa		12.48	□□□□□ -0.41
VIRMA-208	ENST00000523263	MICALL2	Q8IY33	904 aa		12.48	□□□□□ -0.41
VIRMA-208	ENST00000523263	C2orf69	Q8N8R5	385 aa		12.48	□□□□□ -0.41
VIRMA-208	ENST00000523263	GBA2	Q9HCG7	927 aa	Predicted RBP	12.48	□□□□□ -0.41
VIRMA-208	ENST00000523263	NUP98	P52948	1817 aa		12.48	□□□□□ -0.41
VIRMA-208	ENST00000523263	KRT26	Q7Z3Y9	468 aa		12.47	□□□□□ -0.41
VIRMA-208	ENST00000523263	NLRP10	Q86W26	655 aa		12.47	□□□□□ -0.41
VIRMA-208	ENST00000523263	PNN	Q9H307	717 aa	Known RBP	12.47	□□□□□ -0.41
VIRMA-208	ENST00000523263	KDM3B	Q7LBC6	1761 aa		12.46	□□□□□ -0.41
VIRMA-208	ENST00000523263	SH3TC1	Q8TE82	1336 aa		12.46	□□□□□ -0.41
VIRMA-208	ENST00000523263	KIF23	Q02241	960 aa	Predicted RBP	12.46	□□□□□ -0.41
VIRMA-208	ENST00000523263	TCIRG1	Q13488	830 aa		12.46	□□□□□ -0.41
VIRMA-208	ENST00000523263	WASHC4	Q2M389	1173 aa		12.46	□□□□□ -0.41
VIRMA-208	ENST00000523263	RNF186	Q9NXI6	227 aa		12.46	□□□□□ -0.41
VIRMA-208	ENST00000523263	SHTN1	A0MZ66	631 aa		12.45	□□□□□ -0.42
VIRMA-208	ENST00000523263	PSMD14	O00487	310 aa		12.45	□□□□□ -0.42
VIRMA-208	ENST00000523263	SLC10A3	P09131	477 aa		12.45	□□□□□ -0.42
VIRMA-208	ENST00000523263	HCLS1	P14317	486 aa	Predicted RBP	12.45	□□□□□ -0.42
VIRMA-208	ENST00000523263	SAMD7	Q7Z3H4	446 aa		12.45	□□□□□ -0.42
VIRMA-208	ENST00000523263	DCPS	Q96C86	337 aa	Known RBP	12.45	□□□□□ -0.42
VIRMA-208	ENST00000523263	TRMT112	Q9UI30	125 aa	Known RBP	12.45	□□□□□ -0.42
VIRMA-208	ENST00000523263	ZNF157	P51786	506 aa	Predicted RBP	12.44	□□□□□ -0.42
VIRMA-208	ENST00000523263	SF3B3	Q15393	1217 aa	Known RBP	12.44	□□□□□ -0.42
VIRMA-208	ENST00000523263	PRPF38B	Q5VTL8	546 aa	Known RBP	12.44	□□□□□ -0.42
VIRMA-208	ENST00000523263	COPS6	Q7L5N1	327 aa		12.44	□□□□□ -0.42
VIRMA-208	ENST00000523263	CTU1	Q7Z7A3	348 aa	Known RBP	12.44	□□□□□ -0.42
VIRMA-208	ENST00000523263	CSRNP1	Q96S65	589 aa		12.44	□□□□□ -0.42
VIRMA-208	ENST00000523263	THUMPD2	Q9BTF0	503 aa	Known RBP	12.44	□□□□□ -0.42
VIRMA-208	ENST00000523263	TSPYL4	Q9UJ04	414 aa		12.44	□□□□□ -0.42
VIRMA-208	ENST00000523263	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.44	□□□□□ -0.42
VIRMA-208	ENST00000523263	TRPA1	O75762	1119 aa		12.43	□□□□□ -0.42
VIRMA-208	ENST00000523263	EIF2S2	P20042	333 aa	Known RBP	12.43	□□□□□ -0.42
VIRMA-208	ENST00000523263	FKBP1B	P68106	108 aa		12.43	□□□□□ -0.42
VIRMA-208	ENST00000523263	PKN2	Q16513	984 aa	Known RBP	12.43	□□□□□ -0.42
VIRMA-208	ENST00000523263	PROSER3	Q2NL68	480 aa		12.43	□□□□□ -0.42
VIRMA-208	ENST00000523263	NECTIN2	Q92692	538 aa		12.43	□□□□□ -0.42
VIRMA-208	ENST00000523263	EYA3	Q99504	573 aa		12.43	□□□□□ -0.42
VIRMA-208	ENST00000523263	DUOX1	Q9NRD9	1551 aa		12.43	□□□□□ -0.42
VIRMA-208	ENST00000523263	EGFR	P00533	1210 aa		12.42	□□□□□ -0.42
VIRMA-208	ENST00000523263	VIL1	P09327	827 aa	Known RBP	12.42	□□□□□ -0.42
VIRMA-208	ENST00000523263	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.42	□□□□□ -0.42
VIRMA-208	ENST00000523263	DLK2	Q6UY11	383 aa		12.42	□□□□□ -0.42
VIRMA-208	ENST00000523263	XAGE3	Q8WTP9	111 aa		12.42	□□□□□ -0.42
VIRMA-208	ENST00000523263	POLL	Q9UGP5	575 aa		12.42	□□□□□ -0.42
VIRMA-208	ENST00000523263	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.42	□□□□□ -0.42
VIRMA-208	ENST00000523263	CASP8AP2	Q9UKL3	1982 aa		12.41	□□□□□ -0.42
VIRMA-208	ENST00000523263	ADM5	C9JUS6	153 aa		12.41	□□□□□ -0.42
VIRMA-208	ENST00000523263	ZNF609	O15014	1411 aa		12.41	□□□□□ -0.42
VIRMA-208	ENST00000523263	ECE2	O60344	883 aa		12.41	□□□□□ -0.42
VIRMA-208	ENST00000523263	NOM1	Q5C9Z4	860 aa	Known RBP	12.41	□□□□□ -0.42
VIRMA-208	ENST00000523263	SULF1	Q8IWU6	871 aa		12.41	□□□□□ -0.42
VIRMA-208	ENST00000523263	DBNDD1	Q9H9R9	158 aa		12.41	□□□□□ -0.42
VIRMA-208	ENST00000523263	PODXL2	Q9NZ53	605 aa		12.41	□□□□□ -0.42
VIRMA-208	ENST00000523263	RTL9	Q8NET4	1388 aa		12.41	□□□□□ -0.42
VIRMA-208	ENST00000523263	ANKRD36C	Q5JPF3	1778 aa		12.41	□□□□□ -0.42
VIRMA-208	ENST00000523263	MAPK8IP3	Q9UPT6	1336 aa		12.4	□□□□□ -0.42
VIRMA-208	ENST00000523263	C6orf229	H3BNL8	230 aa		12.4	□□□□□ -0.42
VIRMA-208	ENST00000523263	ANXA1	P04083	346 aa		12.4	□□□□□ -0.42
VIRMA-208	ENST00000523263	SOX10	P56693	466 aa		12.4	□□□□□ -0.42
VIRMA-208	ENST00000523263	ZNF280A	P59817	542 aa	Predicted RBP	12.4	□□□□□ -0.42
VIRMA-208	ENST00000523263	TRIM28	Q13263	835 aa	Known RBP	12.4	□□□□□ -0.42
VIRMA-208	ENST00000523263	KIF4B	Q2VIQ3	1234 aa		12.4	□□□□□ -0.42
VIRMA-208	ENST00000523263	AGBL3	Q8NEM8	1001 aa		12.4	□□□□□ -0.42
VIRMA-208	ENST00000523263	CELF1	Q92879	486 aa	Known RBP	12.4	□□□□□ -0.42
VIRMA-208	ENST00000523263	ISCA1	Q9BUE6	129 aa		12.4	□□□□□ -0.42
VIRMA-208	ENST00000523263	GPSM2	P81274	684 aa		12.39	□□□□□ -0.43
VIRMA-208	ENST00000523263	AIMP1	Q12904	312 aa	Known RBP	12.39	□□□□□ -0.43
VIRMA-208	ENST00000523263	RASAL3	Q86YV0	1011 aa		12.39	□□□□□ -0.43
VIRMA-208	ENST00000523263	PLBD2	Q8NHP8	589 aa		12.39	□□□□□ -0.43
VIRMA-208	ENST00000523263	TBC1D16	Q8TBP0	767 aa		12.39	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms