RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 TPM3P06753 285 aa12.48□□□□□ -0.41
ERGIC1-211ENST00000523215 KIF1BPQ96EK5 621 aa12.48□□□□□ -0.41
ERGIC1-211ENST00000523215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.48□□□□□ -0.41
ERGIC1-211ENST00000523215 ATAD5Q96QE3 1844 aa12.48□□□□□ -0.41
ERGIC1-211ENST00000523215 FAM237AA0A1B0GTK4 181 aa12.48□□□□□ -0.41
ERGIC1-211ENST00000523215 ABTB2Q8N961 1025 aa12.48□□□□□ -0.41
ERGIC1-211ENST00000523215 CHAMP1Q96JM3 812 aa12.48□□□□□ -0.41
ERGIC1-211ENST00000523215 DISP2A7MBM2 1401 aa12.48□□□□□ -0.41
ERGIC1-211ENST00000523215 F13A1P00488 732 aa12.48□□□□□ -0.41
ERGIC1-211ENST00000523215 ADD1P35611 737 aaKnown RBP12.48□□□□□ -0.41
ERGIC1-211ENST00000523215 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.48□□□□□ -0.41
ERGIC1-211ENST00000523215 KCNF1Q9H3M0 494 aa12.48□□□□□ -0.41
ERGIC1-211ENST00000523215 RBM6P78332 1123 aaKnown RBP12.47□□□□□ -0.41
ERGIC1-211ENST00000523215 NBPF20Q3BBV1 942 aa12.47□□□□□ -0.41
ERGIC1-211ENST00000523215 AKAP4Q5JQC9 854 aa12.47□□□□□ -0.41
ERGIC1-211ENST00000523215 SH3TC1Q8TE82 1336 aa12.47□□□□□ -0.41
ERGIC1-211ENST00000523215 NHSQ6T4R5 1651 aa12.47□□□□□ -0.41
ERGIC1-211ENST00000523215 CAVIN2O95810 425 aa12.47□□□□□ -0.41
ERGIC1-211ENST00000523215 MCTP1Q6DN14 999 aa12.47□□□□□ -0.41
ERGIC1-211ENST00000523215 KIAA1211Q6ZU35 1233 aa12.47□□□□□ -0.41
ERGIC1-211ENST00000523215 RHPN1Q8TCX5 695 aa12.47□□□□□ -0.41
ERGIC1-211ENST00000523215 ZNF609O15014 1411 aa12.47□□□□□ -0.41
ERGIC1-211ENST00000523215 ELOA2Q8IYF1 753 aaPredicted RBP12.47□□□□□ -0.41
ERGIC1-211ENST00000523215 TDRD7Q8NHU6 1098 aaKnown RBP12.47□□□□□ -0.41
ERGIC1-211ENST00000523215 BPIFA3Q9BQP9 254 aa12.47□□□□□ -0.41
ERGIC1-211ENST00000523215 TSPY26PQ9H489 355 aa12.47□□□□□ -0.41
ERGIC1-211ENST00000523215 WDR19Q8NEZ3 1342 aa12.46□□□□□ -0.41
ERGIC1-211ENST00000523215 HSP90AB4PQ58FF6 505 aa12.46□□□□□ -0.41
ERGIC1-211ENST00000523215 NUP98P52948 1817 aa12.46□□□□□ -0.41
ERGIC1-211ENST00000523215 RBM33Q96EV2 1170 aaKnown RBP12.46□□□□□ -0.42
ERGIC1-211ENST00000523215 LIMCH1Q9UPQ0 1083 aa12.46□□□□□ -0.42
ERGIC1-211ENST00000523215 STRCQ7RTU9 1775 aa12.46□□□□□ -0.42
ERGIC1-211ENST00000523215 FOCADQ5VW36 1801 aa12.46□□□□□ -0.42
ERGIC1-211ENST00000523215 NBPF7P0C2Y1 421 aaPredicted RBP12.45□□□□□ -0.42
ERGIC1-211ENST00000523215 ATL3Q6DD88 541 aa12.45□□□□□ -0.42
ERGIC1-211ENST00000523215 USP48Q86UV5 1035 aa12.45□□□□□ -0.42
ERGIC1-211ENST00000523215 PHF8Q9UPP1 1060 aa12.45□□□□□ -0.42
ERGIC1-211ENST00000523215 MEGF6O75095 1541 aa12.45□□□□□ -0.42
ERGIC1-211ENST00000523215 HSP90AA1P07900 732 aaKnown RBP12.45□□□□□ -0.42
ERGIC1-211ENST00000523215 MYH2Q9UKX2 1941 aa12.45□□□□□ -0.42
ERGIC1-211ENST00000523215 FOXD4L5Q5VV16 416 aaPredicted RBP12.45□□□□□ -0.42
ERGIC1-211ENST00000523215 CAVIN1Q6NZI2 390 aaKnown RBP12.45□□□□□ -0.42
ERGIC1-211ENST00000523215 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
ERGIC1-211ENST00000523215 FOXD4L4Q8WXT5 416 aaPredicted RBP12.45□□□□□ -0.42
ERGIC1-211ENST00000523215 GPR108Q9NPR9 543 aa12.45□□□□□ -0.42
ERGIC1-211ENST00000523215 ERBB3P21860 1342 aa12.44□□□□□ -0.42
ERGIC1-211ENST00000523215 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.44□□□□□ -0.429e-7■■□□□ 12.9
ERGIC1-211ENST00000523215 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.44□□□□□ -0.42
ERGIC1-211ENST00000523215 NBPF11Q86T75 865 aa12.44□□□□□ -0.42
ERGIC1-211ENST00000523215 SYAP1Q96A49 352 aaPredicted RBP12.44□□□□□ -0.42
ERGIC1-211ENST00000523215 LRRC59Q96AG4 307 aaKnown RBP12.44□□□□□ -0.42
ERGIC1-211ENST00000523215 STK31Q9BXU1 1019 aa12.44□□□□□ -0.42
ERGIC1-211ENST00000523215 CHPF2Q9P2E5 772 aa12.44□□□□□ -0.42
ERGIC1-211ENST00000523215 MYH13Q9UKX3 1938 aa12.43□□□□□ -0.42
ERGIC1-211ENST00000523215 SYT1P21579 422 aa12.43□□□□□ -0.42
ERGIC1-211ENST00000523215 TOB2Q14106 344 aaPredicted RBP12.43□□□□□ -0.42
ERGIC1-211ENST00000523215 LTV1Q96GA3 475 aaPredicted RBP12.43□□□□□ -0.42
ERGIC1-211ENST00000523215 HMG20BQ9P0W2 317 aa12.43□□□□□ -0.42
ERGIC1-211ENST00000523215 COL16A1Q07092 1604 aaPredicted RBP12.43□□□□□ -0.42
ERGIC1-211ENST00000523215 GADD45BO75293 160 aaPredicted RBP12.43□□□□□ -0.42
ERGIC1-211ENST00000523215 GLRX3O76003 335 aaKnown RBP12.43□□□□□ -0.42
ERGIC1-211ENST00000523215 SBF2Q86WG5 1849 aa12.43□□□□□ -0.42
ERGIC1-211ENST00000523215 PRAMEF22A3QJZ6 481 aa12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 HIP1O00291 1037 aa12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 AK2P54819 239 aa12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 ARHGEF25Q86VW2 580 aa12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 ERC1Q8IUD2 1116 aa12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 LOC102724159A0A0B4J2E5 919 aa12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 SEMA3FQ13275 785 aa12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 PWP2Q15269 919 aaKnown RBP12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 HDGFL1Q5TGJ6 251 aa12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 LLPHQ9BRT6 129 aaKnown RBP12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 COPRSQ9NQ92 184 aa12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 AXIN2Q9Y2T1 843 aa12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 SLIT2O94813 1529 aa12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 PRPF40AO75400 957 aaKnown RBP12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 PROSER3Q2NL68 480 aa12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 AMOTQ4VCS5 1084 aa12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 PPP1R42Q7Z4L9 355 aa12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 EVI5LQ96CN4 794 aa12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.42□□□□□ -0.42
ERGIC1-211ENST00000523215 STX6O43752 255 aa12.41□□□□□ -0.42
ERGIC1-211ENST00000523215 RAD21O60216 631 aa12.41□□□□□ -0.42
ERGIC1-211ENST00000523215 SLFNL1Q499Z3 407 aa12.41□□□□□ -0.42
ERGIC1-211ENST00000523215 RBM27Q9P2N5 1060 aaKnown RBP12.41□□□□□ -0.42
ERGIC1-211ENST00000523215 ZMYM6O95789 1325 aa12.41□□□□□ -0.42
ERGIC1-211ENST00000523215 CCDC94Q9BW85 323 aaPredicted RBP12.41□□□□□ -0.42
ERGIC1-211ENST00000523215 NYAP1Q6ZVC0 841 aa12.41□□□□□ -0.42
ERGIC1-211ENST00000523215 ZNF646O15015 1829 aaPredicted RBP12.4□□□□□ -0.42
ERGIC1-211ENST00000523215 SASH1O94885 1247 aa12.4□□□□□ -0.42
ERGIC1-211ENST00000523215 LARGE1O95461 756 aa12.4□□□□□ -0.42
ERGIC1-211ENST00000523215 RESTQ13127 1097 aa12.4□□□□□ -0.42
ERGIC1-211ENST00000523215 ENGASEQ8NFI3 743 aa12.4□□□□□ -0.42
ERGIC1-211ENST00000523215 IL1RAPL2Q9NP60 686 aa12.4□□□□□ -0.42
ERGIC1-211ENST00000523215 SYCE3A1L190 88 aa12.4□□□□□ -0.42
ERGIC1-211ENST00000523215 ANXA1P04083 346 aa12.4□□□□□ -0.42
ERGIC1-211ENST00000523215 EXOC8Q8IYI6 725 aa12.4□□□□□ -0.42
ERGIC1-211ENST00000523215 COL14A1Q05707 1796 aaKnown RBP12.4□□□□□ -0.42
ERGIC1-211ENST00000523215 KIF13BQ9NQT8 1826 aa12.4□□□□□ -0.42
ERGIC1-211ENST00000523215 NUTM1Q86Y26 1132 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms