RNA–Protein interactions for RNA: ENST00000521710.1

NPM1-209, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-209ENST00000521710 GTPBP3Q969Y2 492 aaKnown RBP4.6□□□□□ -1.67
NPM1-209ENST00000521710 SLC30A3Q99726 388 aa4.6□□□□□ -1.67
NPM1-209ENST00000521710 GSX2Q9BZM3 304 aa4.6□□□□□ -1.67
NPM1-209ENST00000521710 SENP2Q9HC62 589 aa4.6□□□□□ -1.67
NPM1-209ENST00000521710 EREGO14944 169 aa4.59□□□□□ -1.67
NPM1-209ENST00000521710 VEGFBP49765 207 aa4.59□□□□□ -1.67
NPM1-209ENST00000521710 LBRQ14739 615 aaKnown RBP4.59□□□□□ -1.67
NPM1-209ENST00000521710 PDE12Q6L8Q7 609 aaKnown RBP4.59□□□□□ -1.67
NPM1-209ENST00000521710 SNX29Q8TEQ0 813 aa4.59□□□□□ -1.67
NPM1-209ENST00000521710 KIFC2Q96AC6 838 aa4.59□□□□□ -1.67
NPM1-209ENST00000521710 CCDC74AQ96AQ1 378 aa4.59□□□□□ -1.67
NPM1-209ENST00000521710 ZFYVE28Q9HCC9 887 aa4.59□□□□□ -1.67
NPM1-209ENST00000521710 LATS2Q9NRM7 1088 aa4.59□□□□□ -1.67
NPM1-209ENST00000521710 KCNH4Q9UQ05 1017 aa4.59□□□□□ -1.67
NPM1-209ENST00000521710 C11orf95C9JLR9 678 aaPredicted RBP4.58□□□□□ -1.68
NPM1-209ENST00000521710 MMP20O60882 483 aa4.58□□□□□ -1.68
NPM1-209ENST00000521710 CPNE3O75131 537 aaKnown RBP4.58□□□□□ -1.68
NPM1-209ENST00000521710 PPFIA3O75145 1194 aa4.58□□□□□ -1.68
NPM1-209ENST00000521710 RPLP1P05386 114 aaKnown RBP4.58□□□□□ -1.68
NPM1-209ENST00000521710 EPB42P16452 691 aa4.58□□□□□ -1.68
NPM1-209ENST00000521710 DAB2P98082 770 aa4.58□□□□□ -1.68
NPM1-209ENST00000521710 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.58□□□□□ -1.68
NPM1-209ENST00000521710 COL13A1Q5TAT6 717 aaPredicted RBP4.58□□□□□ -1.68
NPM1-209ENST00000521710 FIGNL1Q6PIW4 674 aa4.58□□□□□ -1.68
NPM1-209ENST00000521710 TMC4Q7Z404 712 aa4.58□□□□□ -1.68
NPM1-209ENST00000521710 NLRP13Q86W25 1043 aa4.58□□□□□ -1.68
NPM1-209ENST00000521710 BACH2Q9BYV9 841 aa4.58□□□□□ -1.68
NPM1-209ENST00000521710 NPHS2Q9NP85 383 aa4.58□□□□□ -1.68
NPM1-209ENST00000521710 ABI2Q9NYB9 513 aaPredicted RBP4.58□□□□□ -1.68
NPM1-209ENST00000521710 KANSL3Q9P2N6 904 aa4.58□□□□□ -1.68
NPM1-209ENST00000521710 FNDC3AQ9Y2H6 1198 aaKnown RBP4.58□□□□□ -1.68
NPM1-209ENST00000521710 CDC14CA4D256 554 aa4.57□□□□□ -1.68
NPM1-209ENST00000521710 H7C1W4 665 aa4.57□□□□□ -1.68
NPM1-209ENST00000521710 PHACTR2O75167 634 aa4.57□□□□□ -1.68
NPM1-209ENST00000521710 CTSHP09668 335 aa4.57□□□□□ -1.68
NPM1-209ENST00000521710 ACPPP15309 386 aa4.57□□□□□ -1.68
NPM1-209ENST00000521710 NFKB1P19838 968 aa4.57□□□□□ -1.68
NPM1-209ENST00000521710 VAMP1P23763 118 aa4.57□□□□□ -1.68
NPM1-209ENST00000521710 CTBSQ01459 385 aa4.57□□□□□ -1.68
NPM1-209ENST00000521710 SPEM2Q0P670 501 aa4.57□□□□□ -1.68
NPM1-209ENST00000521710 CCINQ13939 588 aa4.57□□□□□ -1.68
NPM1-209ENST00000521710 TSNAXIP1Q2TAA8 658 aa4.57□□□□□ -1.68
NPM1-209ENST00000521710 VWA5B2Q8N398 1253 aa4.57□□□□□ -1.68
NPM1-209ENST00000521710 TTC16Q8NEE8 873 aa4.57□□□□□ -1.68
NPM1-209ENST00000521710 OSBPL7Q9BZF2 842 aa4.57□□□□□ -1.68
NPM1-209ENST00000521710 DNAJC25Q9H1X3 360 aa4.57□□□□□ -1.68
NPM1-209ENST00000521710 C2CD2LO14523 706 aa4.56□□□□□ -1.68
NPM1-209ENST00000521710 FGFR3P22607 806 aa4.56□□□□□ -1.68
NPM1-209ENST00000521710 GNA15P30679 374 aa4.56□□□□□ -1.68
NPM1-209ENST00000521710 ATP2B2Q01814 1243 aa4.56□□□□□ -1.68
NPM1-209ENST00000521710 PSMD2Q13200 908 aa4.56□□□□□ -1.68
NPM1-209ENST00000521710 PEAR1Q5VY43 1037 aaPredicted RBP4.56□□□□□ -1.68
NPM1-209ENST00000521710 ALG1LQ6GMV1 187 aa4.56□□□□□ -1.68
NPM1-209ENST00000521710 GPR161Q8N6U8 529 aaKnown RBP4.56□□□□□ -1.68
NPM1-209ENST00000521710 MARK1Q9P0L2 795 aa4.56□□□□□ -1.68
NPM1-209ENST00000521710 ATXN7L1Q9ULK2 861 aaPredicted RBP4.56□□□□□ -1.68
NPM1-209ENST00000521710 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.56□□□□□ -1.68
NPM1-209ENST00000521710 TRPA1O75762 1119 aa4.55□□□□□ -1.68
NPM1-209ENST00000521710 RARAP10276 462 aa4.55□□□□□ -1.68
NPM1-209ENST00000521710 XPCQ01831 940 aaPredicted RBP4.55□□□□□ -1.68
NPM1-209ENST00000521710 LAMC2Q13753 1193 aa4.55□□□□□ -1.68
NPM1-209ENST00000521710 GAS6Q14393 721 aa4.55□□□□□ -1.68
NPM1-209ENST00000521710 TTC39BQ5VTQ0 682 aaPredicted RBP4.55□□□□□ -1.68
NPM1-209ENST00000521710 GALNT12Q8IXK2 581 aa4.55□□□□□ -1.68
NPM1-209ENST00000521710 OR13H1Q8NG92 308 aa4.55□□□□□ -1.68
NPM1-209ENST00000521710 FBF1Q8TES7 1133 aa4.55□□□□□ -1.68
NPM1-209ENST00000521710 BHMTQ93088 406 aa4.55□□□□□ -1.68
NPM1-209ENST00000521710 ZNF775Q96BV0 537 aaPredicted RBP4.55□□□□□ -1.68
NPM1-209ENST00000521710 CNTNAP3BQ96NU0 1288 aa4.55□□□□□ -1.68
NPM1-209ENST00000521710 HHIPQ96QV1 700 aa4.55□□□□□ -1.68
NPM1-209ENST00000521710 CNTNAP3Q9BZ76 1288 aa4.55□□□□□ -1.68
NPM1-209ENST00000521710 ZBTB42B2RXF5 422 aa4.54□□□□□ -1.68
NPM1-209ENST00000521710 SORBS3O60504 671 aa4.54□□□□□ -1.68
NPM1-209ENST00000521710 TCF3P15923 654 aa4.54□□□□□ -1.68
NPM1-209ENST00000521710 CES1P23141 567 aa4.54□□□□□ -1.68
NPM1-209ENST00000521710 HDLBPQ00341 1268 aaKnown RBP4.54□□□□□ -1.68
NPM1-209ENST00000521710 MLLT1Q03111 559 aaPredicted RBP4.54□□□□□ -1.68
NPM1-209ENST00000521710 GRM2Q14416 872 aa4.54□□□□□ -1.68
NPM1-209ENST00000521710 C9orf131Q5VYM1 1079 aa4.54□□□□□ -1.68
NPM1-209ENST00000521710 NXPE4Q6UWF7 544 aa4.54□□□□□ -1.68
NPM1-209ENST00000521710 GLIS3Q8NEA6 775 aa4.54□□□□□ -1.68
NPM1-209ENST00000521710 NANOS1Q8WY41 292 aaKnown RBP4.54□□□□□ -1.68
NPM1-209ENST00000521710 GMCL1Q96IK5 515 aa4.54□□□□□ -1.68
NPM1-209ENST00000521710 NSUN5Q96P11 429 aaKnown RBP4.54□□□□□ -1.68
NPM1-209ENST00000521710 C11orf16Q9NQ32 467 aa4.54□□□□□ -1.68
NPM1-209ENST00000521710 TLR7Q9NYK1 1049 aaKnown RBP4.54□□□□□ -1.68
NPM1-209ENST00000521710 VTI1BQ9UEU0 232 aa4.54□□□□□ -1.68
NPM1-209ENST00000521710 KLF15Q9UIH9 416 aa4.54□□□□□ -1.68
NPM1-209ENST00000521710 SALL4Q9UJQ4 1053 aa4.54□□□□□ -1.68
NPM1-209ENST00000521710 AK5Q9Y6K8 562 aa4.54□□□□□ -1.68
NPM1-209ENST00000521710 A0A1W2PP55 124 aa4.53□□□□□ -1.68
NPM1-209ENST00000521710 KIF4AO95239 1232 aa4.53□□□□□ -1.68
NPM1-209ENST00000521710 NEFLP07196 543 aa4.53□□□□□ -1.68
NPM1-209ENST00000521710 RNFT1Q5M7Z0 435 aa4.53□□□□□ -1.68
NPM1-209ENST00000521710 FAM182BQ5T319 152 aa4.53□□□□□ -1.68
NPM1-209ENST00000521710 LCE2AQ5TA79 106 aaPredicted RBP4.53□□□□□ -1.68
NPM1-209ENST00000521710 MEI1Q5TIA1 1274 aa4.53□□□□□ -1.68
NPM1-209ENST00000521710 ADAMTSL4Q6UY14 1074 aa4.53□□□□□ -1.68
NPM1-209ENST00000521710 HFE2Q6ZVN8 426 aa4.53□□□□□ -1.68
NPM1-209ENST00000521710 SV2AQ7L0J3 742 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms