RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 DUOX1Q9NRD9 1551 aa12.03□□□□□ -0.48
CLK4-209ENST00000521621 A0A1B0GUL6 1792 aa12.03□□□□□ -0.48
CLK4-209ENST00000521621 CCDC152Q4G0S7 254 aa12.02□□□□□ -0.48
CLK4-209ENST00000521621 SUPT20HQ8NEM7 779 aa12.02□□□□□ -0.48
CLK4-209ENST00000521621 FAM89AQ96GI7 184 aa12.02□□□□□ -0.48
CLK4-209ENST00000521621 HNRNPUQ00839 825 aaKnown RBP eCLIP12.02□□□□□ -0.49
CLK4-209ENST00000521621 API5Q9BZZ5 524 aaKnown RBP12.02□□□□□ -0.49
CLK4-209ENST00000521621 TAOK3Q9H2K8 898 aa12.02□□□□□ -0.49
CLK4-209ENST00000521621 ZNF609O15014 1411 aa12.02□□□□□ -0.49
CLK4-209ENST00000521621 CCDC24Q8N4L8 307 aa12.01□□□□□ -0.49
CLK4-209ENST00000521621 PODXL2Q9NZ53 605 aa12.01□□□□□ -0.49
CLK4-209ENST00000521621 C21orf2O43822 256 aa12.01□□□□□ -0.49
CLK4-209ENST00000521621 CTSWP56202 376 aa12.01□□□□□ -0.49
CLK4-209ENST00000521621 SRCIN1Q9C0H9 1055 aa12.01□□□□□ -0.49
CLK4-209ENST00000521621 FAM177BA6PVY3 158 aa12.01□□□□□ -0.49
CLK4-209ENST00000521621 HCLS1P14317 486 aaPredicted RBP12.01□□□□□ -0.49
CLK4-209ENST00000521621 CCT4P50991 539 aaKnown RBP12□□□□□ -0.49
CLK4-209ENST00000521621 SCN4AP35499 1836 aa12□□□□□ -0.49
CLK4-209ENST00000521621 GRM8O00222 908 aa12□□□□□ -0.49
CLK4-209ENST00000521621 PRELPP51888 382 aa12□□□□□ -0.49
CLK4-209ENST00000521621 C9orf131Q5VYM1 1079 aa12□□□□□ -0.49
CLK4-209ENST00000521621 SYNE4Q8N205 404 aa12□□□□□ -0.49
CLK4-209ENST00000521621 TTLL11Q8NHH1 800 aa12□□□□□ -0.49
CLK4-209ENST00000521621 COL4A1P02462 1669 aa12□□□□□ -0.49
CLK4-209ENST00000521621 PSME4Q14997 1843 aa11.99□□□□□ -0.49
CLK4-209ENST00000521621 SENP3-EIF4A1A0A087X0R7 540 aa11.99□□□□□ -0.49
CLK4-209ENST00000521621 CWF19L2Q2TBE0 894 aaKnown RBP11.99□□□□□ -0.49
CLK4-209ENST00000521621 ZNF784Q8NCA9 323 aaPredicted RBP11.99□□□□□ -0.49
CLK4-209ENST00000521621 SMC4Q9NTJ3 1288 aa11.99□□□□□ -0.49
CLK4-209ENST00000521621 HDAC5Q9UQL6 1122 aa11.99□□□□□ -0.49
CLK4-209ENST00000521621 TCERG1O14776 1098 aaKnown RBP11.99□□□□□ -0.49
CLK4-209ENST00000521621 IPO8O15397 1037 aaKnown RBP11.99□□□□□ -0.49
CLK4-209ENST00000521621 TMX4Q9H1E5 349 aaPredicted RBP11.99□□□□□ -0.49
CLK4-209ENST00000521621 RPS8P62241 208 aaKnown RBP11.98□□□□□ -0.49
CLK4-209ENST00000521621 FOXO4P98177 505 aa11.98□□□□□ -0.49
CLK4-209ENST00000521621 RABL6Q3YEC7 729 aaPredicted RBP11.98□□□□□ -0.49
CLK4-209ENST00000521621 INTS3Q68E01 1043 aaKnown RBP11.98□□□□□ -0.49
CLK4-209ENST00000521621 CDC5LQ99459 802 aaKnown RBP11.98□□□□□ -0.49
CLK4-209ENST00000521621 IARSP41252 1262 aaKnown RBP11.97□□□□□ -0.49
CLK4-209ENST00000521621 BSDC1Q9NW68 430 aaPredicted RBP11.97□□□□□ -0.49
CLK4-209ENST00000521621 KDM2BQ8NHM5 1336 aa11.97□□□□□ -0.49
CLK4-209ENST00000521621 FZD9O00144 591 aa11.97□□□□□ -0.49
CLK4-209ENST00000521621 ZBTB22O15209 634 aa11.97□□□□□ -0.49
CLK4-209ENST00000521621 RASSF7Q02833 373 aa11.97□□□□□ -0.49
CLK4-209ENST00000521621 RNF181Q9P0P0 153 aa11.97□□□□□ -0.49
CLK4-209ENST00000521621 TAF1P21675 1872 aa11.97□□□□□ -0.49
CLK4-209ENST00000521621 F6X3S4 739 aa11.96□□□□□ -0.49
CLK4-209ENST00000521621 UBE3BQ7Z3V4 1068 aa11.96□□□□□ -0.49
CLK4-209ENST00000521621 L3MBTL3Q96JM7 780 aaPredicted RBP11.96□□□□□ -0.49
CLK4-209ENST00000521621 ADAMTSL1Q8N6G6 1762 aa11.96□□□□□ -0.49
CLK4-209ENST00000521621 ZNF646O15015 1829 aaPredicted RBP11.96□□□□□ -0.49
CLK4-209ENST00000521621 SPEF2Q9C093 1822 aa11.96□□□□□ -0.49
CLK4-209ENST00000521621 GLTPD2A6NH11 291 aa11.96□□□□□ -0.49
CLK4-209ENST00000521621 C15orf52Q6ZUT6 534 aaKnown RBP11.96□□□□□ -0.5
CLK4-209ENST00000521621 CELF1Q92879 486 aaKnown RBP11.96□□□□□ -0.5
CLK4-209ENST00000521621 NOB1Q9ULX3 412 aaKnown RBP11.96□□□□□ -0.5
CLK4-209ENST00000521621 COL4A5P29400 1685 aa11.95□□□□□ -0.5
CLK4-209ENST00000521621 KIAA2012Q0VF49 1180 aa11.95□□□□□ -0.5
CLK4-209ENST00000521621 ANKRD18AQ8IVF6 992 aa11.95□□□□□ -0.5
CLK4-209ENST00000521621 MPNDQ8N594 471 aa11.95□□□□□ -0.5
CLK4-209ENST00000521621 FBXO3Q9UK99 471 aa11.95□□□□□ -0.5
CLK4-209ENST00000521621 ATF7IPQ6VMQ6 1270 aa11.94□□□□□ -0.5
CLK4-209ENST00000521621 EYA3Q99504 573 aa11.94□□□□□ -0.5
CLK4-209ENST00000521621 USP44Q9H0E7 712 aa11.94□□□□□ -0.5
CLK4-209ENST00000521621 XDHP47989 1333 aa11.94□□□□□ -0.5
CLK4-209ENST00000521621 DPP8Q6V1X1 898 aaPredicted RBP11.94□□□□□ -0.5
CLK4-209ENST00000521621 KAZALD1Q96I82 304 aa11.94□□□□□ -0.5
CLK4-209ENST00000521621 ANKRD2Q9GZV1 360 aa11.94□□□□□ -0.5
CLK4-209ENST00000521621 C9orf78Q9NZ63 289 aaPredicted RBP11.94□□□□□ -0.5
CLK4-209ENST00000521621 MED23Q9ULK4 1368 aa11.93□□□□□ -0.5
CLK4-209ENST00000521621 ATP2B4P23634 1241 aa11.93□□□□□ -0.5
CLK4-209ENST00000521621 MMP14P50281 582 aa11.93□□□□□ -0.5
CLK4-209ENST00000521621 GREM2Q9H772 168 aa11.93□□□□□ -0.5
CLK4-209ENST00000521621 ANKRD18BA2A2Z9 1011 aa11.93□□□□□ -0.5
CLK4-209ENST00000521621 MS4A1P11836 297 aa11.93□□□□□ -0.5
CLK4-209ENST00000521621 DPY19L2Q6NUT2 758 aa11.93□□□□□ -0.5
CLK4-209ENST00000521621 LEMD3Q9Y2U8 911 aa11.93□□□□□ -0.5
CLK4-209ENST00000521621 ZKSCAN2Q63HK3 967 aa11.92□□□□□ -0.5
CLK4-209ENST00000521621 SEC31BQ9NQW1 1179 aa11.92□□□□□ -0.5
CLK4-209ENST00000521621 ITGA6P23229 1130 aa11.92□□□□□ -0.5
CLK4-209ENST00000521621 IGHMBP2P38935 993 aaKnown RBP11.92□□□□□ -0.5
CLK4-209ENST00000521621 MTX1Q13505 466 aa11.92□□□□□ -0.5
CLK4-209ENST00000521621 GPC2Q8N158 579 aa11.92□□□□□ -0.5
CLK4-209ENST00000521621 ANKRD44Q8N8A2 993 aa11.92□□□□□ -0.5
CLK4-209ENST00000521621 GPSM2P81274 684 aa11.91□□□□□ -0.5
CLK4-209ENST00000521621 TBC1D16Q8TBP0 767 aa11.91□□□□□ -0.5
CLK4-209ENST00000521621 IRS2Q9Y4H2 1338 aa11.91□□□□□ -0.5
CLK4-209ENST00000521621 KIF3CO14782 793 aa11.91□□□□□ -0.5
CLK4-209ENST00000521621 GNAI3P08754 354 aa11.91□□□□□ -0.5
CLK4-209ENST00000521621 TRIM27P14373 513 aa11.91□□□□□ -0.5
CLK4-209ENST00000521621 IFIT5Q13325 482 aaKnown RBP11.91□□□□□ -0.5
CLK4-209ENST00000521621 JDP2Q8WYK2 163 aa11.91□□□□□ -0.5
CLK4-209ENST00000521621 SUCLG2Q96I99 432 aa11.91□□□□□ -0.5
CLK4-209ENST00000521621 GPBP1L1Q9HC44 474 aaPredicted RBP11.91□□□□□ -0.5
CLK4-209ENST00000521621 WWC3Q9ULE0 1092 aa11.91□□□□□ -0.5
CLK4-209ENST00000521621 ZNRF3Q9ULT6 936 aa11.91□□□□□ -0.5
CLK4-209ENST00000521621 MINPP1Q9UNW1 487 aa11.91□□□□□ -0.5
CLK4-209ENST00000521621 NBPF7P0C2Y1 421 aaPredicted RBP11.9□□□□□ -0.5
CLK4-209ENST00000521621 SLC4A10Q6U841 1118 aa11.9□□□□□ -0.5
CLK4-209ENST00000521621 RBM46Q8TBY0 533 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms