RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 VTI1AQ96AJ9 217 aa9.57□□□□□ -0.88
LINC00535-204ENST00000520513 MKNK1Q9BUB5 465 aa9.57□□□□□ -0.88
LINC00535-204ENST00000520513 TNFRSF10BO14763 440 aa9.56□□□□□ -0.88
LINC00535-204ENST00000520513 TREML1Q86YW5 311 aa9.56□□□□□ -0.88
LINC00535-204ENST00000520513 CXXC1Q9P0U4 656 aaPredicted RBP9.56□□□□□ -0.88
LINC00535-204ENST00000520513 SASH3O75995 380 aa9.55□□□□□ -0.88
LINC00535-204ENST00000520513 PLAURQ03405 335 aa9.55□□□□□ -0.88
LINC00535-204ENST00000520513 NUDT8Q8WV74 236 aa9.55□□□□□ -0.88
LINC00535-204ENST00000520513 PBXIP1Q96AQ6 731 aa9.55□□□□□ -0.88
LINC00535-204ENST00000520513 RTCBQ9Y3I0 505 aaKnown RBP9.55□□□□□ -0.88
LINC00535-204ENST00000520513 EPB42P16452 691 aa9.54□□□□□ -0.88
LINC00535-204ENST00000520513 ILDR2Q71H61 639 aa9.54□□□□□ -0.88
LINC00535-204ENST00000520513 KCNMB2Q9Y691 235 aa9.54□□□□□ -0.88
LINC00535-204ENST00000520513 PPP1R15AO75807 674 aaPredicted RBP9.53□□□□□ -0.88
LINC00535-204ENST00000520513 NAA30Q147X3 362 aaPredicted RBP9.53□□□□□ -0.88
LINC00535-204ENST00000520513 CLP1Q92989 425 aaKnown RBP9.53□□□□□ -0.88
LINC00535-204ENST00000520513 PNMA5Q96PV4 448 aa9.53□□□□□ -0.88
LINC00535-204ENST00000520513 K7ELQ4 463 aaPredicted RBP9.52□□□□□ -0.89
LINC00535-204ENST00000520513 MAP3K6O95382 1288 aa9.52□□□□□ -0.89
LINC00535-204ENST00000520513 FURINP09958 794 aa9.52□□□□□ -0.89
LINC00535-204ENST00000520513 SCNN1AP37088 669 aa9.52□□□□□ -0.89
LINC00535-204ENST00000520513 MLLT1Q03111 559 aaPredicted RBP9.52□□□□□ -0.89
LINC00535-204ENST00000520513 PRRT3Q5FWE3 981 aa9.52□□□□□ -0.89
LINC00535-204ENST00000520513 PSAPL1Q6NUJ1 521 aa9.52□□□□□ -0.89
LINC00535-204ENST00000520513 RGL4Q8IZJ4 473 aa9.52□□□□□ -0.89
LINC00535-204ENST00000520513 AFF1P51825 1210 aaKnown RBP9.51□□□□□ -0.89
LINC00535-204ENST00000520513 TRIP4Q15650 581 aaPredicted RBP9.51□□□□□ -0.89
LINC00535-204ENST00000520513 GRIK5Q16478 980 aa9.51□□□□□ -0.89
LINC00535-204ENST00000520513 C16orf46Q6P387 395 aa9.51□□□□□ -0.89
LINC00535-204ENST00000520513 DHX32Q7L7V1 743 aaKnown RBP9.51□□□□□ -0.89
LINC00535-204ENST00000520513 LPIN3Q9BQK8 851 aa9.51□□□□□ -0.89
LINC00535-204ENST00000520513 JPH1Q9HDC5 661 aaPredicted RBP9.51□□□□□ -0.89
LINC00535-204ENST00000520513 ZBTB39O15060 712 aa9.5□□□□□ -0.89
LINC00535-204ENST00000520513 LILRB5O75023 590 aa9.5□□□□□ -0.89
LINC00535-204ENST00000520513 EGFRP00533 1210 aa9.5□□□□□ -0.89
LINC00535-204ENST00000520513 CPB1P15086 417 aa9.5□□□□□ -0.89
LINC00535-204ENST00000520513 GRIK4Q16099 956 aa9.5□□□□□ -0.89
LINC00535-204ENST00000520513 COL26A1Q96A83 441 aa9.5□□□□□ -0.89
LINC00535-204ENST00000520513 C11orf16Q9NQ32 467 aa9.5□□□□□ -0.89
LINC00535-204ENST00000520513 RARAP10276 462 aa9.49□□□□□ -0.89
LINC00535-204ENST00000520513 ITGB7P26010 798 aa9.49□□□□□ -0.89
LINC00535-204ENST00000520513 PERM1Q5SV97 790 aa9.49□□□□□ -0.89
LINC00535-204ENST00000520513 FAM35AQ86V20 835 aa9.49□□□□□ -0.89
LINC00535-204ENST00000520513 CMTR1Q8N1G2 835 aaKnown RBP9.49□□□□□ -0.89
LINC00535-204ENST00000520513 TRPM4Q8TD43 1214 aa9.49□□□□□ -0.89
LINC00535-204ENST00000520513 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.49□□□□□ -0.89
LINC00535-204ENST00000520513 SEPT3Q9UH03 358 aa9.49□□□□□ -0.89
LINC00535-204ENST00000520513 XYLBO75191 536 aa9.48□□□□□ -0.89
LINC00535-204ENST00000520513 A0A0A0MRY4 1105 aa9.47□□□□□ -0.89
LINC00535-204ENST00000520513 DOC2BQ14184 412 aa9.47□□□□□ -0.89
LINC00535-204ENST00000520513 HFE2Q6ZVN8 426 aa9.47□□□□□ -0.89
LINC00535-204ENST00000520513 NACC1Q96RE7 527 aa9.47□□□□□ -0.89
LINC00535-204ENST00000520513 MMP20O60882 483 aa9.46□□□□□ -0.9
LINC00535-204ENST00000520513 APBA3O96018 575 aa9.46□□□□□ -0.9
LINC00535-204ENST00000520513 GATA4P43694 442 aa9.46□□□□□ -0.9
LINC00535-204ENST00000520513 GPLD1P80108 840 aa9.46□□□□□ -0.9
LINC00535-204ENST00000520513 TRAPPC3LQ5T215 181 aa9.46□□□□□ -0.9
LINC00535-204ENST00000520513 RGS9O75916 674 aaPredicted RBP9.45□□□□□ -0.9
LINC00535-204ENST00000520513 PDIA4P13667 645 aaKnown RBP9.45□□□□□ -0.9
LINC00535-204ENST00000520513 SELPP16109 830 aa9.45□□□□□ -0.9
LINC00535-204ENST00000520513 ATP2B4P23634 1241 aa9.45□□□□□ -0.9
LINC00535-204ENST00000520513 BRD2P25440 801 aaKnown RBP9.45□□□□□ -0.9
LINC00535-204ENST00000520513 TRIM28Q13263 835 aaKnown RBP9.45□□□□□ -0.9
LINC00535-204ENST00000520513 PCSK7Q16549 785 aa9.45□□□□□ -0.9
LINC00535-204ENST00000520513 DMRTC2Q8IXT2 367 aaPredicted RBP9.45□□□□□ -0.9
LINC00535-204ENST00000520513 TLR7Q9NYK1 1049 aaKnown RBP9.45□□□□□ -0.9
LINC00535-204ENST00000520513 CARNS1A5YM72 827 aa9.44□□□□□ -0.9
LINC00535-204ENST00000520513 TMEM88BA6NKF7 163 aa9.44□□□□□ -0.9
LINC00535-204ENST00000520513 J3QW42 95 aa9.44□□□□□ -0.9
LINC00535-204ENST00000520513 SHISA2Q6UWI4 295 aa9.44□□□□□ -0.9
LINC00535-204ENST00000520513 NRLP54845 237 aa9.43□□□□□ -0.9
LINC00535-204ENST00000520513 PDE4CQ08493 712 aa9.43□□□□□ -0.9
LINC00535-204ENST00000520513 PTCD1O75127 700 aaKnown RBP9.42□□□□□ -0.9
LINC00535-204ENST00000520513 ZAP70P43403 619 aa9.42□□□□□ -0.9
LINC00535-204ENST00000520513 SMG9Q9H0W8 520 aaKnown RBP9.42□□□□□ -0.9
LINC00535-204ENST00000520513 FRRS1LQ9P0K9 344 aa9.42□□□□□ -0.9
LINC00535-204ENST00000520513 COL13A1Q5TAT6 717 aaPredicted RBP9.41□□□□□ -0.9
LINC00535-204ENST00000520513 ATCAYQ86WG3 371 aa9.41□□□□□ -0.9
LINC00535-204ENST00000520513 GPR152Q8TDT2 470 aa9.41□□□□□ -0.9
LINC00535-204ENST00000520513 NSUN5Q96P11 429 aaKnown RBP9.41□□□□□ -0.9
LINC00535-204ENST00000520513 TPSG1Q9NRR2 321 aa9.41□□□□□ -0.9
LINC00535-204ENST00000520513 STIM2Q9P246 746 aa9.41□□□□□ -0.9
LINC00535-204ENST00000520513 MSL1Q68DK7 614 aa9.4□□□□□ -0.9
LINC00535-204ENST00000520513 ELMSAN1Q6PJG2 1045 aa9.4□□□□□ -0.9
LINC00535-204ENST00000520513 FMR1NBQ8N0W7 255 aaPredicted RBP9.4□□□□□ -0.9
LINC00535-204ENST00000520513 TRAIPQ9BWF2 469 aa9.4□□□□□ -0.9
LINC00535-204ENST00000520513 LOC102724428A0A0B4J2F2 783 aa9.39□□□□□ -0.91
LINC00535-204ENST00000520513 HOXD8P13378 290 aaPredicted RBP9.39□□□□□ -0.91
LINC00535-204ENST00000520513 ELNP15502 786 aa9.39□□□□□ -0.91
LINC00535-204ENST00000520513 EIF2AK2P19525 551 aaKnown RBP9.39□□□□□ -0.91
LINC00535-204ENST00000520513 SIK1P57059 783 aa9.39□□□□□ -0.91
LINC00535-204ENST00000520513 RAC1P63000 192 aa9.39□□□□□ -0.91
LINC00535-204ENST00000520513 RSPO4Q2I0M5 234 aaPredicted RBP9.39□□□□□ -0.91
LINC00535-204ENST00000520513 NLRP13Q86W25 1043 aa9.39□□□□□ -0.91
LINC00535-204ENST00000520513 TTC9Q92623 222 aa9.39□□□□□ -0.91
LINC00535-204ENST00000520513 UBAP1LF5GYI3 381 aa9.38□□□□□ -0.91
LINC00535-204ENST00000520513 DEAF1O75398 565 aaPredicted RBP9.38□□□□□ -0.91
LINC00535-204ENST00000520513 ARID4AP29374 1257 aaPredicted RBP9.38□□□□□ -0.91
LINC00535-204ENST00000520513 ADGRE1Q14246 886 aa9.38□□□□□ -0.91
LINC00535-204ENST00000520513 MBTPS1Q14703 1052 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms