RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 ZNF280CQ8ND82 737 aa6.8□□□□□ -1.32
PDLIM5-218ENST00000513341 KRTAP4-9Q9BYQ8 210 aa6.8□□□□□ -1.32
PDLIM5-218ENST00000513341 GSX2Q9BZM3 304 aa6.8□□□□□ -1.32
PDLIM5-218ENST00000513341 PHACTR1Q9C0D0 580 aa6.8□□□□□ -1.32
PDLIM5-218ENST00000513341 CHMP3Q9Y3E7 222 aa6.8□□□□□ -1.32
PDLIM5-218ENST00000513341 M0R2N6 131 aa6.79□□□□□ -1.32
PDLIM5-218ENST00000513341 GSC2O15499 205 aa6.79□□□□□ -1.32
PDLIM5-218ENST00000513341 MAP3K6O95382 1288 aa6.79□□□□□ -1.32
PDLIM5-218ENST00000513341 TAL1P17542 331 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-218ENST00000513341 FAM69CQ0P6D2 419 aa6.79□□□□□ -1.32
PDLIM5-218ENST00000513341 IER5Q5VY09 327 aa6.79□□□□□ -1.32
PDLIM5-218ENST00000513341 BTLAQ7Z6A9 289 aa6.79□□□□□ -1.32
PDLIM5-218ENST00000513341 STAG2Q8N3U4 1231 aa6.79□□□□□ -1.32
PDLIM5-218ENST00000513341 FGD5Q6ZNL6 1462 aa6.79□□□□□ -1.32
PDLIM5-218ENST00000513341 DLL1O00548 723 aa6.78□□□□□ -1.32
PDLIM5-218ENST00000513341 BRPF1P55201 1214 aaPredicted RBP6.78□□□□□ -1.32
PDLIM5-218ENST00000513341 TBCELQ5QJ74 424 aa6.78□□□□□ -1.32
PDLIM5-218ENST00000513341 LPIN3Q9BQK8 851 aa6.78□□□□□ -1.32
PDLIM5-218ENST00000513341 C11orf16Q9NQ32 467 aa6.78□□□□□ -1.32
PDLIM5-218ENST00000513341 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.78□□□□□ -1.32
PDLIM5-218ENST00000513341 PIK3CDO00329 1044 aa6.77□□□□□ -1.33
PDLIM5-218ENST00000513341 SSTR4P31391 388 aa6.77□□□□□ -1.33
PDLIM5-218ENST00000513341 PSME1Q06323 249 aa6.77□□□□□ -1.33
PDLIM5-218ENST00000513341 TBC1D8BQ0IIM8 1120 aa6.77□□□□□ -1.33
PDLIM5-218ENST00000513341 CCINQ13939 588 aa6.77□□□□□ -1.33
PDLIM5-218ENST00000513341 Q6ZS46 218 aa6.77□□□□□ -1.33
PDLIM5-218ENST00000513341 ABCC10Q5T3U5 1492 aa6.77□□□□□ -1.33
PDLIM5-218ENST00000513341 GP2P55259 537 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-218ENST00000513341 NEUROD2Q15784 382 aa6.76□□□□□ -1.33
PDLIM5-218ENST00000513341 TRIM50Q86XT4 487 aa6.76□□□□□ -1.33
PDLIM5-218ENST00000513341 WFDC8Q8IUA0 241 aa6.76□□□□□ -1.33
PDLIM5-218ENST00000513341 IGFLR1Q9H665 355 aa6.76□□□□□ -1.33
PDLIM5-218ENST00000513341 AKTIPQ9H8T0 292 aa6.76□□□□□ -1.33
PDLIM5-218ENST00000513341 SRA1Q9HD15 236 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-218ENST00000513341 HCN4Q9Y3Q4 1203 aa6.76□□□□□ -1.33
PDLIM5-218ENST00000513341 RNF114Q9Y508 228 aa6.76□□□□□ -1.33
PDLIM5-218ENST00000513341 OAS3Q9Y6K5 1087 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-218ENST00000513341 CEP170Q5SW79 1584 aa6.76□□□□□ -1.33
PDLIM5-218ENST00000513341 DEAF1O75398 565 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-218ENST00000513341 SKIP12755 728 aa6.75□□□□□ -1.33
PDLIM5-218ENST00000513341 NCOA4Q13772 614 aa6.75□□□□□ -1.33
PDLIM5-218ENST00000513341 FAM35AQ86V20 835 aa6.75□□□□□ -1.33
PDLIM5-218ENST00000513341 TRPM4Q8TD43 1214 aa6.75□□□□□ -1.33
PDLIM5-218ENST00000513341 DCAF11Q8TEB1 546 aa6.75□□□□□ -1.33
PDLIM5-218ENST00000513341 PNMA5Q96PV4 448 aa6.75□□□□□ -1.33
PDLIM5-218ENST00000513341 MRPL18Q9H0U6 180 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-218ENST00000513341 TSPAN10Q9H1Z9 355 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-218ENST00000513341 SHROOM2Q13796 1616 aa6.75□□□□□ -1.33
PDLIM5-218ENST00000513341 NUP160Q12769 1436 aa6.75□□□□□ -1.33
PDLIM5-218ENST00000513341 PBRM1Q86U86 1689 aa6.74□□□□□ -1.33
PDLIM5-218ENST00000513341 ERCC6L2Q5T890 1561 aa6.74□□□□□ -1.33
PDLIM5-218ENST00000513341 GRIN2AQ12879 1464 aa6.74□□□□□ -1.33
PDLIM5-218ENST00000513341 ZBTB7BO15156 539 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-218ENST00000513341 GDPD2Q9HCC8 539 aa6.74□□□□□ -1.33
PDLIM5-218ENST00000513341 KDM6BO15054 1643 aa6.73□□□□□ -1.33
PDLIM5-218ENST00000513341 MAPKBP1O60336 1514 aa6.73□□□□□ -1.33
PDLIM5-218ENST00000513341 NFKB1P19838 968 aa6.73□□□□□ -1.33
PDLIM5-218ENST00000513341 PERM1Q5SV97 790 aa6.73□□□□□ -1.33
PDLIM5-218ENST00000513341 ALDH16A1Q8IZ83 802 aa6.73□□□□□ -1.33
PDLIM5-218ENST00000513341 GAS2L2Q8NHY3 880 aa6.73□□□□□ -1.33
PDLIM5-218ENST00000513341 FBXO41Q8TF61 875 aa6.73□□□□□ -1.33
PDLIM5-218ENST00000513341 KRTAP4-2Q9BYR5 136 aa6.73□□□□□ -1.33
PDLIM5-218ENST00000513341 ALG2Q9H553 416 aa6.73□□□□□ -1.33
PDLIM5-218ENST00000513341 ABCA10Q8WWZ4 1543 aa6.72□□□□□ -1.33
PDLIM5-218ENST00000513341 F8W735 103 aaPredicted RBP6.72□□□□□ -1.33
PDLIM5-218ENST00000513341 PTCD1O75127 700 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-218ENST00000513341 MED26O95402 600 aa6.72□□□□□ -1.33
PDLIM5-218ENST00000513341 IGLV1-40P01703 118 aa6.72□□□□□ -1.33
PDLIM5-218ENST00000513341 ABL2P42684 1182 aa6.72□□□□□ -1.33
PDLIM5-218ENST00000513341 ATP1A2P50993 1020 aa6.72□□□□□ -1.33
PDLIM5-218ENST00000513341 INTS5Q6P9B9 1019 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-218ENST00000513341 DMGDHQ9UI17 866 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-218ENST00000513341 RAXQ9Y2V3 346 aa6.72□□□□□ -1.33
PDLIM5-218ENST00000513341 CUX1P39880 1505 aa6.71□□□□□ -1.33
PDLIM5-218ENST00000513341 TGFBR3LH3BV60 316 aa6.71□□□□□ -1.34
PDLIM5-218ENST00000513341 CPB1P15086 417 aa6.71□□□□□ -1.34
PDLIM5-218ENST00000513341 SPINK2P20155 84 aa6.71□□□□□ -1.34
PDLIM5-218ENST00000513341 GPLD1P80108 840 aa6.71□□□□□ -1.34
PDLIM5-218ENST00000513341 CCDC102BQ68D86 513 aa6.71□□□□□ -1.34
PDLIM5-218ENST00000513341 ELMSAN1Q6PJG2 1045 aa6.71□□□□□ -1.34
PDLIM5-218ENST00000513341 MAP4K3Q8IVH8 894 aa6.71□□□□□ -1.34
PDLIM5-218ENST00000513341 PLEKHM2Q8IWE5 1019 aa6.71□□□□□ -1.34
PDLIM5-218ENST00000513341 C2orf49Q9BVC5 232 aaPredicted RBP6.71□□□□□ -1.34
PDLIM5-218ENST00000513341 DIP2BQ9P265 1576 aa6.7□□□□□ -1.34
PDLIM5-218ENST00000513341 PRG4Q92954 1404 aaPredicted RBP6.7□□□□□ -1.34
PDLIM5-218ENST00000513341 ABCA5Q8WWZ7 1642 aa6.7□□□□□ -1.34
PDLIM5-218ENST00000513341 USP17L5A8MUK1 530 aa6.7□□□□□ -1.34
PDLIM5-218ENST00000513341 ZBTB42B2RXF5 422 aa6.7□□□□□ -1.34
PDLIM5-218ENST00000513341 EPB42P16452 691 aa6.7□□□□□ -1.34
PDLIM5-218ENST00000513341 LARGE2Q8N3Y3 721 aa6.7□□□□□ -1.34
PDLIM5-218ENST00000513341 TPCN2Q8NHX9 752 aa6.7□□□□□ -1.34
PDLIM5-218ENST00000513341 FHAD1B1AJZ9 1412 aa6.69□□□□□ -1.34
PDLIM5-218ENST00000513341 C21orf2O43822 256 aa6.69□□□□□ -1.34
PDLIM5-218ENST00000513341 PPP1R12BO60237 982 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-218ENST00000513341 DHX32Q7L7V1 743 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-218ENST00000513341 ARID4AP29374 1257 aaPredicted RBP6.68□□□□□ -1.34
PDLIM5-218ENST00000513341 GRIK1P39086 918 aa6.68□□□□□ -1.34
PDLIM5-218ENST00000513341 NRLP54845 237 aa6.68□□□□□ -1.34
PDLIM5-218ENST00000513341 PLAURQ03405 335 aa6.68□□□□□ -1.34
PDLIM5-218ENST00000513341 RTN1Q16799 776 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms