RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 NHSQ6T4R5 1651 aa11.43□□□□□ -0.58
NR1I3-230ENST00000511944 BHMG1C9JSJ3 638 aaPredicted RBP11.43□□□□□ -0.58
NR1I3-230ENST00000511944 SMAPO00193 183 aa11.43□□□□□ -0.58
NR1I3-230ENST00000511944 TCERG1O14776 1098 aaKnown RBP11.43□□□□□ -0.58
NR1I3-230ENST00000511944 ALDH1L1O75891 902 aa11.43□□□□□ -0.58
NR1I3-230ENST00000511944 STARD3NLO95772 234 aa11.43□□□□□ -0.58
NR1I3-230ENST00000511944 HMGB2P26583 209 aaKnown RBP11.43□□□□□ -0.58
NR1I3-230ENST00000511944 KSR2Q6VAB6 950 aa11.43□□□□□ -0.58
NR1I3-230ENST00000511944 G2E3Q7L622 706 aa11.43□□□□□ -0.58
NR1I3-230ENST00000511944 LRP10Q7Z4F1 713 aa11.43□□□□□ -0.58
NR1I3-230ENST00000511944 FBXO41Q8TF61 875 aa11.43□□□□□ -0.58
NR1I3-230ENST00000511944 DNAAF4Q8WXU2 420 aa11.43□□□□□ -0.58
NR1I3-230ENST00000511944 ATG3Q9NT62 314 aa11.43□□□□□ -0.58
NR1I3-230ENST00000511944 ADCY9O60503 1353 aa11.42□□□□□ -0.58
NR1I3-230ENST00000511944 RPAP2Q8IXW5 612 aaPredicted RBP11.42□□□□□ -0.58
NR1I3-230ENST00000511944 SRCIN1Q9C0H9 1055 aa11.42□□□□□ -0.58
NR1I3-230ENST00000511944 ADGRG1Q9Y653 693 aa11.42□□□□□ -0.58
NR1I3-230ENST00000511944 RREB1Q92766 1687 aa11.41□□□□□ -0.58
NR1I3-230ENST00000511944 LINS1Q8NG48 757 aa11.41□□□□□ -0.58
NR1I3-230ENST00000511944 PHAXQ9H814 394 aaKnown RBP11.41□□□□□ -0.58
NR1I3-230ENST00000511944 SLC24A3Q9HC58 644 aa11.41□□□□□ -0.58
NR1I3-230ENST00000511944 RABGEF1Q9UJ41 708 aa11.41□□□□□ -0.58
NR1I3-230ENST00000511944 USP16Q9Y5T5 823 aa11.41□□□□□ -0.58
NR1I3-230ENST00000511944 COL15A1P39059 1388 aa11.41□□□□□ -0.58
NR1I3-230ENST00000511944 PI4KAP2A4QPH2 592 aa11.4□□□□□ -0.58
NR1I3-230ENST00000511944 IRF6O14896 467 aa11.4□□□□□ -0.58
NR1I3-230ENST00000511944 MAP2K5Q13163 448 aa11.4□□□□□ -0.58
NR1I3-230ENST00000511944 BEND3Q5T5X7 828 aa11.4□□□□□ -0.58
NR1I3-230ENST00000511944 PI4KAP1Q8N8J0 262 aa11.4□□□□□ -0.58
NR1I3-230ENST00000511944 QTRT2Q9H974 415 aaKnown RBP11.4□□□□□ -0.58
NR1I3-230ENST00000511944 ASAP1Q9ULH1 1129 aa11.4□□□□□ -0.58
NR1I3-230ENST00000511944 PCDHB15Q9Y5E8 787 aa11.4□□□□□ -0.58
NR1I3-230ENST00000511944 TJP1Q07157 1748 aa11.4□□□□□ -0.58
NR1I3-230ENST00000511944 PRAMEF22A3QJZ6 481 aa11.39□□□□□ -0.59
NR1I3-230ENST00000511944 PTCD1O75127 700 aaKnown RBP11.39□□□□□ -0.59
NR1I3-230ENST00000511944 NEXNQ0ZGT2 675 aa11.39□□□□□ -0.59
NR1I3-230ENST00000511944 NUDT18Q6ZVK8 323 aa11.39□□□□□ -0.59
NR1I3-230ENST00000511944 SMC5Q8IY18 1101 aa11.39□□□□□ -0.59
NR1I3-230ENST00000511944 PLBD2Q8NHP8 589 aa11.39□□□□□ -0.59
NR1I3-230ENST00000511944 NECTIN2Q92692 538 aa11.39□□□□□ -0.59
NR1I3-230ENST00000511944 TATDN2Q93075 761 aa11.39□□□□□ -0.59
NR1I3-230ENST00000511944 GCC1Q96CN9 775 aa11.39□□□□□ -0.59
NR1I3-230ENST00000511944 PHOX2BQ99453 314 aa11.39□□□□□ -0.59
NR1I3-230ENST00000511944 SEPT9Q9UHD8 586 aaPredicted RBP11.39□□□□□ -0.59
NR1I3-230ENST00000511944 PALLDQ8WX93 1383 aa11.39□□□□□ -0.59
NR1I3-230ENST00000511944 UTYO14607 1347 aa11.38□□□□□ -0.59
NR1I3-230ENST00000511944 F6X3S4 739 aa11.38□□□□□ -0.59
NR1I3-230ENST00000511944 HMMRO75330 724 aa11.38□□□□□ -0.59
NR1I3-230ENST00000511944 GNAI2P04899 355 aa11.38□□□□□ -0.59
NR1I3-230ENST00000511944 RBM6P78332 1123 aaKnown RBP11.38□□□□□ -0.59
NR1I3-230ENST00000511944 PROSER3Q2NL68 480 aa11.38□□□□□ -0.59
NR1I3-230ENST00000511944 SLC4A10Q6U841 1118 aa11.38□□□□□ -0.59
NR1I3-230ENST00000511944 PACS2Q86VP3 889 aa11.38□□□□□ -0.59
NR1I3-230ENST00000511944 ANKRD44Q8N8A2 993 aa11.38□□□□□ -0.59
NR1I3-230ENST00000511944 CCDC102AQ96A19 550 aa11.38□□□□□ -0.59
NR1I3-230ENST00000511944 METTL22Q9BUU2 404 aaPredicted RBP11.38□□□□□ -0.59
NR1I3-230ENST00000511944 PNMA3Q9UL41 463 aa11.38□□□□□ -0.59
NR1I3-230ENST00000511944 UBTFL1P0CB47 393 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-230ENST00000511944 CYP19A1P11511 503 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-230ENST00000511944 IL6STP40189 918 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-230ENST00000511944 SEPT12Q8IYM1 358 aa11.37□□□□□ -0.59
NR1I3-230ENST00000511944 KRI1Q8N9T8 703 aaKnown RBP11.37□□□□□ -0.59
NR1I3-230ENST00000511944 XAGE3Q8WTP9 111 aa11.37□□□□□ -0.59
NR1I3-230ENST00000511944 PCDH10Q9P2E7 1040 aa11.37□□□□□ -0.59
NR1I3-230ENST00000511944 MAP3K2Q9Y2U5 619 aa11.37□□□□□ -0.59
NR1I3-230ENST00000511944 LOC102724428A0A0B4J2F2 783 aa11.36□□□□□ -0.59
NR1I3-230ENST00000511944 A0A0G2JS52 829 aa11.36□□□□□ -0.59
NR1I3-230ENST00000511944 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
NR1I3-230ENST00000511944 IGHDP01880 384 aa11.36□□□□□ -0.59
NR1I3-230ENST00000511944 SIK1P57059 783 aa11.36□□□□□ -0.59
NR1I3-230ENST00000511944 MYT1Q01538 1121 aa11.36□□□□□ -0.59
NR1I3-230ENST00000511944 MTX1Q13505 466 aa11.36□□□□□ -0.59
NR1I3-230ENST00000511944 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
NR1I3-230ENST00000511944 NBPF10Q6P3W6 841 aaKnown RBP11.36□□□□□ -0.59
NR1I3-230ENST00000511944 COPS6Q7L5N1 327 aa11.36□□□□□ -0.59
NR1I3-230ENST00000511944 RIC3Q7Z5B4 369 aa11.36□□□□□ -0.59
NR1I3-230ENST00000511944 NBPF15Q8N660 670 aa11.36□□□□□ -0.59
NR1I3-230ENST00000511944 SYTL4Q96C24 671 aaPredicted RBP11.36□□□□□ -0.59
NR1I3-230ENST00000511944 MEIS3Q99687 375 aa11.36□□□□□ -0.59
NR1I3-230ENST00000511944 USP44Q9H0E7 712 aa11.36□□□□□ -0.59
NR1I3-230ENST00000511944 NUP188Q5SRE5 1749 aa11.35□□□□□ -0.59
NR1I3-230ENST00000511944 ERVV-1B6SEH8 477 aa11.35□□□□□ -0.59
NR1I3-230ENST00000511944 MYL6BP14649 208 aa11.35□□□□□ -0.59
NR1I3-230ENST00000511944 TRIM28Q13263 835 aaKnown RBP11.35□□□□□ -0.59
NR1I3-230ENST00000511944 CEP85Q6P2H3 762 aa11.35□□□□□ -0.59
NR1I3-230ENST00000511944 FAM196AQ6ZSG2 479 aa11.35□□□□□ -0.59
NR1I3-230ENST00000511944 DNAJC10Q8IXB1 793 aa11.35□□□□□ -0.59
NR1I3-230ENST00000511944 PXYLP1Q8TE99 480 aa11.35□□□□□ -0.59
NR1I3-230ENST00000511944 NLRP7Q8WX94 980 aa11.35□□□□□ -0.59
NR1I3-230ENST00000511944 ARFGEF2Q9Y6D5 1785 aa11.35□□□□□ -0.59
NR1I3-230ENST00000511944 COL5A3P25940 1745 aaPredicted RBP11.35□□□□□ -0.59
NR1I3-230ENST00000511944 CNTNAP4Q9C0A0 1308 aa11.35□□□□□ -0.59
NR1I3-230ENST00000511944 ANXA1P04083 346 aa11.34□□□□□ -0.59
NR1I3-230ENST00000511944 HSP90AB3PQ58FF7 597 aa11.34□□□□□ -0.59
NR1I3-230ENST00000511944 RC3H1Q5TC82 1133 aaKnown RBP11.34□□□□□ -0.59
NR1I3-230ENST00000511944 METTL3Q86U44 580 aaKnown RBP11.34□□□□□ -0.59
NR1I3-230ENST00000511944 SLC4A9Q96Q91 983 aa11.34□□□□□ -0.59
NR1I3-230ENST00000511944 CCDC87Q9NVE4 849 aa11.34□□□□□ -0.59
NR1I3-230ENST00000511944 BTAF1O14981 1849 aa11.33□□□□□ -0.6
NR1I3-230ENST00000511944 NEURL1BA8MQ27 555 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms