RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 CASTP20810 708 aaKnown RBP6.64□□□□□ -1.35
USP38-203ENST00000511739 GBP3Q9H0R5 595 aa6.64□□□□□ -1.35
USP38-203ENST00000511739 ZNF408Q9H9D4 720 aa6.64□□□□□ -1.35
USP38-203ENST00000511739 WASLO00401 505 aaPredicted RBP6.64□□□□□ -1.35
USP38-203ENST00000511739 PRKCSHP14314 528 aaPredicted RBP6.64□□□□□ -1.35
USP38-203ENST00000511739 ZBTB3Q9H5J0 574 aa6.64□□□□□ -1.35
USP38-203ENST00000511739 PARP3Q9Y6F1 533 aa6.64□□□□□ -1.35
USP38-203ENST00000511739 SBNO2Q9Y2G9 1366 aa6.64□□□□□ -1.35
USP38-203ENST00000511739 ATP10AO60312 1499 aa6.64□□□□□ -1.35
USP38-203ENST00000511739 LDHAL6AQ6ZMR3 332 aa6.64□□□□□ -1.35
USP38-203ENST00000511739 LRRC27Q9C0I9 530 aa6.64□□□□□ -1.35
USP38-203ENST00000511739 GLRX3O76003 335 aaKnown RBP6.64□□□□□ -1.35
USP38-203ENST00000511739 SNX16P57768 344 aa6.64□□□□□ -1.35
USP38-203ENST00000511739 DPH6Q7L8W6 267 aa6.64□□□□□ -1.35
USP38-203ENST00000511739 SETDB2Q96T68 719 aa6.64□□□□□ -1.35
USP38-203ENST00000511739 KDM6BO15054 1643 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 BRDTQ58F21 947 aaPredicted RBP6.63□□□□□ -1.35
USP38-203ENST00000511739 C8orf37Q96NL8 207 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 CRNKL1Q9BZJ0 848 aaKnown RBP6.63□□□□□ -1.35
USP38-203ENST00000511739 TFCP2L1Q9NZI6 479 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 SERPINA10Q9UK55 444 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 KIF5CO60282 957 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 CCDC172P0C7W6 258 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 UBA7P41226 1012 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 TTF1Q15361 905 aaPredicted RBP6.63□□□□□ -1.35
USP38-203ENST00000511739 NUP88Q99567 741 aaPredicted RBP6.63□□□□□ -1.35
USP38-203ENST00000511739 STX8Q9UNK0 236 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 BMS1Q14692 1282 aaKnown RBP6.63□□□□□ -1.35
USP38-203ENST00000511739 MAP9Q49MG5 647 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 FAM212AQ96EL1 285 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 GPHNQ9NQX3 736 aaPredicted RBP6.63□□□□□ -1.35
USP38-203ENST00000511739 PHF8Q9UPP1 1060 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 HLTFQ14527 1009 aaKnown RBP eCLIP6.63□□□□□ -1.35
USP38-203ENST00000511739 TMCO3Q6UWJ1 677 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 MPNDQ8N594 471 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 USHBP1Q8N6Y0 703 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 YEATS4O95619 227 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 HMGB1P09429 215 aaKnown RBP6.63□□□□□ -1.35
USP38-203ENST00000511739 KRT13P13646 458 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 KIF4BQ2VIQ3 1234 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 PRPF31Q8WWY3 499 aaKnown RBP6.63□□□□□ -1.35
USP38-203ENST00000511739 PLVAPQ9BX97 442 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 KDM5CP41229 1560 aa6.63□□□□□ -1.35
USP38-203ENST00000511739 RAB11FIP3O75154 756 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 RARSP54136 660 aaKnown RBP6.62□□□□□ -1.35
USP38-203ENST00000511739 ZGPATQ8N5A5 531 aaKnown RBP6.62□□□□□ -1.35
USP38-203ENST00000511739 GIMAP7Q8NHV1 300 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 TBC1D5Q92609 795 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 NAA15Q9BXJ9 866 aaKnown RBP6.62□□□□□ -1.35
USP38-203ENST00000511739 MIS18AQ9NYP9 233 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 ODF2LQ9ULJ1 636 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 SHTN1A0MZ66 631 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 TAF7Q15545 349 aaPredicted RBP6.62□□□□□ -1.35
USP38-203ENST00000511739 CCDC152Q4G0S7 254 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 C6orf163Q5TEZ5 329 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 UBXN4Q92575 508 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 CFAP57Q96MR6 1250 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 TRPM2O94759 1503 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 CCDC175P0C221 793 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 GUCY1B3Q02153 619 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 APBB1IPQ7Z5R6 666 aaPredicted RBP6.62□□□□□ -1.35
USP38-203ENST00000511739 FAM114A1Q8IWE2 563 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 RPAP2Q8IXW5 612 aaPredicted RBP6.62□□□□□ -1.35
USP38-203ENST00000511739 DDX12PQ92771 950 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 GJA3Q9Y6H8 435 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 CROCC2H7BZ55 1655 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 TNRQ92752 1358 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 ZSCAN12O43309 604 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 TSPY3P0CV98 308 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 TSPY8P0CW00 308 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 PICALMQ13492 652 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 KRT28Q7Z3Y7 464 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 CNNM3Q8NE01 707 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 SMARCC2Q8TAQ2 1214 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 IQCGQ9H095 443 aaKnown RBP6.62□□□□□ -1.35
USP38-203ENST00000511739 TTC21BQ7Z4L5 1316 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 K7ELQ4 463 aaPredicted RBP6.62□□□□□ -1.35
USP38-203ENST00000511739 TNNI2P48788 182 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 MAP3K11Q16584 847 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 ATP2B3Q16720 1220 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 CCDC14Q49A88 953 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 NLRP3Q96P20 1036 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 HAUS7Q99871 368 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 ZC3H12CQ9C0D7 883 aaKnown RBP6.62□□□□□ -1.35
USP38-203ENST00000511739 EXOC6BQ9Y2D4 811 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 NOC2LQ9Y3T9 749 aaKnown RBP6.62□□□□□ -1.35
USP38-203ENST00000511739 ZCCHC11Q5TAX3 1644 aaKnown RBP6.62□□□□□ -1.35
USP38-203ENST00000511739 ZFYVE9O95405 1425 aa6.62□□□□□ -1.35
USP38-203ENST00000511739 TOP1P11387 765 aaKnown RBP6.61□□□□□ -1.35
USP38-203ENST00000511739 SFPQP23246 707 aaKnown RBP eCLIP6.61□□□□□ -1.35
USP38-203ENST00000511739 MCM3P25205 808 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 TMEM67Q5HYA8 995 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 PRPF40BQ6NWY9 871 aaKnown RBP6.61□□□□□ -1.35
USP38-203ENST00000511739 FERMT3Q86UX7 667 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 HYPKQ9NX55 129 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 TTC37Q6PGP7 1564 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 MFSD6Q6ZSS7 791 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 SHROOM2Q13796 1616 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 IQGAP3Q86VI3 1631 aa6.61□□□□□ -1.35
USP38-203ENST00000511739 CCDC83Q8IWF9 413 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms