RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 NAGPAQ9UK23 515 aa9.37□□□□□ -0.91
UBE2D3-225ENST00000508476 XYLBO75191 536 aa9.36□□□□□ -0.91
UBE2D3-225ENST00000508476 C20orf204Q6ZNR8 217 aa9.36□□□□□ -0.91
UBE2D3-225ENST00000508476 PLVAPQ9BX97 442 aa9.36□□□□□ -0.91
UBE2D3-225ENST00000508476 ZBTB42B2RXF5 422 aa9.35□□□□□ -0.91
UBE2D3-225ENST00000508476 RARAP10276 462 aa9.35□□□□□ -0.91
UBE2D3-225ENST00000508476 SSFA2P28290 1259 aa9.35□□□□□ -0.91
UBE2D3-225ENST00000508476 MLLT1Q03111 559 aaPredicted RBP9.35□□□□□ -0.91
UBE2D3-225ENST00000508476 TRIP4Q15650 581 aaPredicted RBP9.35□□□□□ -0.91
UBE2D3-225ENST00000508476 EFCC1Q9HA90 598 aa9.35□□□□□ -0.91
UBE2D3-225ENST00000508476 STIM2Q9P246 746 aa9.35□□□□□ -0.91
UBE2D3-225ENST00000508476 MAP3K6O95382 1288 aa9.34□□□□□ -0.91
UBE2D3-225ENST00000508476 PHLDB3Q6NSJ2 640 aa9.34□□□□□ -0.91
UBE2D3-225ENST00000508476 DHX32Q7L7V1 743 aaKnown RBP9.34□□□□□ -0.91
UBE2D3-225ENST00000508476 NUDT8Q8WV74 236 aa9.34□□□□□ -0.91
UBE2D3-225ENST00000508476 EGFRP00533 1210 aa9.33□□□□□ -0.92
UBE2D3-225ENST00000508476 ZAP70P43403 619 aa9.33□□□□□ -0.92
UBE2D3-225ENST00000508476 PIK3R2O00459 728 aa9.32□□□□□ -0.92
UBE2D3-225ENST00000508476 NID1P14543 1247 aa9.32□□□□□ -0.92
UBE2D3-225ENST00000508476 CPB1P15086 417 aa9.32□□□□□ -0.92
UBE2D3-225ENST00000508476 MTMR3Q13615 1198 aa9.32□□□□□ -0.92
UBE2D3-225ENST00000508476 PSAPL1Q6NUJ1 521 aa9.32□□□□□ -0.92
UBE2D3-225ENST00000508476 ATCAYQ86WG3 371 aa9.32□□□□□ -0.92
UBE2D3-225ENST00000508476 GPR152Q8TDT2 470 aa9.32□□□□□ -0.92
UBE2D3-225ENST00000508476 C11orf16Q9NQ32 467 aa9.32□□□□□ -0.92
UBE2D3-225ENST00000508476 NOP53Q9NZM5 478 aaKnown RBP9.32□□□□□ -0.92
UBE2D3-225ENST00000508476 FAM229AH3BQW9 127 aa9.31□□□□□ -0.92
UBE2D3-225ENST00000508476 PLAURQ03405 335 aa9.31□□□□□ -0.92
UBE2D3-225ENST00000508476 HFE2Q6ZVN8 426 aa9.31□□□□□ -0.92
UBE2D3-225ENST00000508476 ERICH6Q7L0X2 663 aa9.31□□□□□ -0.92
UBE2D3-225ENST00000508476 FAM35AQ86V20 835 aa9.31□□□□□ -0.92
UBE2D3-225ENST00000508476 JPH1Q9HDC5 661 aaPredicted RBP9.31□□□□□ -0.92
UBE2D3-225ENST00000508476 PRDM6Q9NQX0 595 aa9.31□□□□□ -0.92
UBE2D3-225ENST00000508476 MMP20O60882 483 aa9.3□□□□□ -0.92
UBE2D3-225ENST00000508476 TRPM4Q8TD43 1214 aa9.3□□□□□ -0.92
UBE2D3-225ENST00000508476 HELQQ8TDG4 1101 aa9.3□□□□□ -0.92
UBE2D3-225ENST00000508476 GTF3C2Q8WUA4 911 aaPredicted RBP9.3□□□□□ -0.92
UBE2D3-225ENST00000508476 LILRB5O75023 590 aa9.29□□□□□ -0.92
UBE2D3-225ENST00000508476 GPLD1P80108 840 aa9.29□□□□□ -0.92
UBE2D3-225ENST00000508476 PERM1Q5SV97 790 aa9.29□□□□□ -0.92
UBE2D3-225ENST00000508476 PIK3R5Q8WYR1 880 aa9.29□□□□□ -0.92
UBE2D3-225ENST00000508476 SPOCK3Q9BQ16 436 aa9.29□□□□□ -0.92
UBE2D3-225ENST00000508476 TLR7Q9NYK1 1049 aaKnown RBP9.29□□□□□ -0.92
UBE2D3-225ENST00000508476 UBAP1LF5GYI3 381 aa9.28□□□□□ -0.92
UBE2D3-225ENST00000508476 PROCP04070 461 aa9.28□□□□□ -0.92
UBE2D3-225ENST00000508476 CHRNA4P43681 627 aa9.28□□□□□ -0.92
UBE2D3-225ENST00000508476 AFF1P51825 1210 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-225ENST00000508476 ALYREFQ86V81 257 aaKnown RBP9.28□□□□□ -0.92
UBE2D3-225ENST00000508476 ABTB2Q8N961 1025 aa9.28□□□□□ -0.92
UBE2D3-225ENST00000508476 LPIN3Q9BQK8 851 aa9.28□□□□□ -0.92
UBE2D3-225ENST00000508476 C1QTNF9BB2RNN3 333 aa9.27□□□□□ -0.93
UBE2D3-225ENST00000508476 J3QW42 95 aa9.27□□□□□ -0.93
UBE2D3-225ENST00000508476 MPSTP25325 297 aa9.27□□□□□ -0.93
UBE2D3-225ENST00000508476 CD163Q86VB7 1156 aa9.27□□□□□ -0.93
UBE2D3-225ENST00000508476 NSUN5Q96P11 429 aaKnown RBP9.27□□□□□ -0.93
UBE2D3-225ENST00000508476 MSTNO14793 375 aa9.26□□□□□ -0.93
UBE2D3-225ENST00000508476 RGS9O75916 674 aaPredicted RBP9.26□□□□□ -0.93
UBE2D3-225ENST00000508476 IGHA1P01876 353 aa9.26□□□□□ -0.93
UBE2D3-225ENST00000508476 NRLP54845 237 aa9.26□□□□□ -0.93
UBE2D3-225ENST00000508476 NLRP13Q86W25 1043 aa9.26□□□□□ -0.93
UBE2D3-225ENST00000508476 PSAPP07602 524 aa9.25□□□□□ -0.93
UBE2D3-225ENST00000508476 GRIK5Q16478 980 aa9.25□□□□□ -0.93
UBE2D3-225ENST00000508476 NUDT16Q96DE0 195 aaKnown RBP9.25□□□□□ -0.93
UBE2D3-225ENST00000508476 FAM13BQ9NYF5 915 aa9.25□□□□□ -0.93
UBE2D3-225ENST00000508476 SPATA31C1P0DKV0 1188 aa9.24□□□□□ -0.93
UBE2D3-225ENST00000508476 EIF2AK2P19525 551 aaKnown RBP9.24□□□□□ -0.93
UBE2D3-225ENST00000508476 EIF1AXP47813 144 aaKnown RBP9.24□□□□□ -0.93
UBE2D3-225ENST00000508476 PCSK7Q16549 785 aa9.24□□□□□ -0.93
UBE2D3-225ENST00000508476 TRAPPC3LQ5T215 181 aa9.24□□□□□ -0.93
UBE2D3-225ENST00000508476 COL13A1Q5TAT6 717 aaPredicted RBP9.24□□□□□ -0.93
UBE2D3-225ENST00000508476 ELMSAN1Q6PJG2 1045 aa9.24□□□□□ -0.93
UBE2D3-225ENST00000508476 EDEM1Q92611 657 aa9.24□□□□□ -0.93
UBE2D3-225ENST00000508476 SMG9Q9H0W8 520 aaKnown RBP9.24□□□□□ -0.93
UBE2D3-225ENST00000508476 ANO2Q9NQ90 1003 aa9.24□□□□□ -0.93
UBE2D3-225ENST00000508476 USTQ9Y2C2 406 aa9.24□□□□□ -0.93
UBE2D3-225ENST00000508476 LOC102724428A0A0B4J2F2 783 aa9.23□□□□□ -0.93
UBE2D3-225ENST00000508476 A6NHS1 94 aa9.23□□□□□ -0.93
UBE2D3-225ENST00000508476 SPDYE3A6NKU9 549 aa9.23□□□□□ -0.93
UBE2D3-225ENST00000508476 SIK1P57059 783 aa9.23□□□□□ -0.93
UBE2D3-225ENST00000508476 DNM1Q05193 864 aaKnown RBP9.23□□□□□ -0.93
UBE2D3-225ENST00000508476 ZNF211Q13398 564 aaPredicted RBP9.23□□□□□ -0.93
UBE2D3-225ENST00000508476 NOM1Q5C9Z4 860 aaKnown RBP9.23□□□□□ -0.93
UBE2D3-225ENST00000508476 PRRT3Q5FWE3 981 aa9.23□□□□□ -0.93
UBE2D3-225ENST00000508476 DMRTC2Q8IXT2 367 aaPredicted RBP9.23□□□□□ -0.93
UBE2D3-225ENST00000508476 RETREG2Q8NC44 543 aa9.23□□□□□ -0.93
UBE2D3-225ENST00000508476 CYP2E1P05181 493 aaPredicted RBP9.22□□□□□ -0.93
UBE2D3-225ENST00000508476 GRIK4Q16099 956 aa9.22□□□□□ -0.93
UBE2D3-225ENST00000508476 FRRS1LQ9P0K9 344 aa9.22□□□□□ -0.93
UBE2D3-225ENST00000508476 TMEM63CQ9P1W3 806 aa9.22□□□□□ -0.93
UBE2D3-225ENST00000508476 A0A0A0MRY4 1105 aa9.21□□□□□ -0.94
UBE2D3-225ENST00000508476 ABL1P00519 1130 aa9.21□□□□□ -0.94
UBE2D3-225ENST00000508476 HOXD8P13378 290 aaPredicted RBP9.21□□□□□ -0.94
UBE2D3-225ENST00000508476 ARID4AP29374 1257 aaPredicted RBP9.21□□□□□ -0.94
UBE2D3-225ENST00000508476 SOX18P35713 384 aa9.21□□□□□ -0.94
UBE2D3-225ENST00000508476 TRIM28Q13263 835 aaKnown RBP9.21□□□□□ -0.94
UBE2D3-225ENST00000508476 ILDR2Q71H61 639 aa9.21□□□□□ -0.94
UBE2D3-225ENST00000508476 OR13H1Q8NG92 308 aa9.21□□□□□ -0.94
UBE2D3-225ENST00000508476 GGNBP2Q9H3C7 697 aa9.21□□□□□ -0.94
UBE2D3-225ENST00000508476 FNDC3AQ9Y2H6 1198 aaKnown RBP9.21□□□□□ -0.94
UBE2D3-225ENST00000508476 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms