RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 LMBR1LQ6UX01 489 aa13.05□□□□□ -0.32
LIN54-207ENST00000508171 CCDC129Q6ZRS4 1044 aa13.05□□□□□ -0.32
LIN54-207ENST00000508171 DNAJC2Q99543 621 aaKnown RBP13.05□□□□□ -0.32
LIN54-207ENST00000508171 ATP6V1DQ9Y5K8 247 aa13.05□□□□□ -0.32
LIN54-207ENST00000508171 MRC1P22897 1456 aa13.04□□□□□ -0.32
LIN54-207ENST00000508171 PHF14O94880 888 aa13.04□□□□□ -0.32
LIN54-207ENST00000508171 RPS6KB1P23443 525 aa13.04□□□□□ -0.32
LIN54-207ENST00000508171 TOB2Q14106 344 aaPredicted RBP13.04□□□□□ -0.32
LIN54-207ENST00000508171 CCDC183Q5T5S1 534 aa13.04□□□□□ -0.32
LIN54-207ENST00000508171 RNF20Q5VTR2 975 aa13.04□□□□□ -0.32
LIN54-207ENST00000508171 FAM173BQ6P4H8 233 aa13.04□□□□□ -0.32
LIN54-207ENST00000508171 FERMT3Q86UX7 667 aa13.04□□□□□ -0.32
LIN54-207ENST00000508171 PLBD2Q8NHP8 589 aa13.04□□□□□ -0.32
LIN54-207ENST00000508171 STK3Q13188 491 aa13.04□□□□□ -0.32
LIN54-207ENST00000508171 TTLL7Q6ZT98 887 aa13.04□□□□□ -0.32
LIN54-207ENST00000508171 CHMP3Q9Y3E7 222 aa13.04□□□□□ -0.32
LIN54-207ENST00000508171 SLFNL1Q499Z3 407 aa13.03□□□□□ -0.32
LIN54-207ENST00000508171 DDX46Q7L014 1031 aaKnown RBP13.03□□□□□ -0.32
LIN54-207ENST00000508171 SPATA31A3Q5VYP0 1347 aa13.03□□□□□ -0.32
LIN54-207ENST00000508171 FOXO4P98177 505 aa13.03□□□□□ -0.32
LIN54-207ENST00000508171 CDC37L1Q7L3B6 337 aa13.03□□□□□ -0.32
LIN54-207ENST00000508171 TNS3Q68CZ2 1445 aa13.02□□□□□ -0.32
LIN54-207ENST00000508171 A1BGP04217 495 aa13.02□□□□□ -0.32
LIN54-207ENST00000508171 MPNDQ8N594 471 aa13.02□□□□□ -0.32
LIN54-207ENST00000508171 PKD1L3Q7Z443 1732 aa13.02□□□□□ -0.33
LIN54-207ENST00000508171 HCLS1P14317 486 aaPredicted RBP13.02□□□□□ -0.33
LIN54-207ENST00000508171 USPL1Q5W0Q7 1092 aa13.02□□□□□ -0.33
LIN54-207ENST00000508171 GIMAP6Q6P9H5 292 aa13.02□□□□□ -0.33
LIN54-207ENST00000508171 CADPS2Q86UW7 1296 aa13.02□□□□□ -0.33
LIN54-207ENST00000508171 ZKSCAN5Q9Y2L8 839 aa13.02□□□□□ -0.33
LIN54-207ENST00000508171 ZNF609O15014 1411 aa13.02□□□□□ -0.33
LIN54-207ENST00000508171 TIMM10P62072 90 aa13.01□□□□□ -0.33
LIN54-207ENST00000508171 TSGA10IPQ3SY00 556 aa13.01□□□□□ -0.33
LIN54-207ENST00000508171 NEUROD6Q96NK8 337 aa13.01□□□□□ -0.33
LIN54-207ENST00000508171 HAUS7Q99871 368 aa13.01□□□□□ -0.33
LIN54-207ENST00000508171 JCADQ9P266 1359 aa13.01□□□□□ -0.33
LIN54-207ENST00000508171 H7C1W4 665 aa13.01□□□□□ -0.33
LIN54-207ENST00000508171 OFD1O75665 1012 aa13.01□□□□□ -0.33
LIN54-207ENST00000508171 HMG20BQ9P0W2 317 aa13.01□□□□□ -0.33
LIN54-207ENST00000508171 GLI3P10071 1580 aa13□□□□□ -0.33
LIN54-207ENST00000508171 ANKRD1Q15327 319 aa13□□□□□ -0.33
LIN54-207ENST00000508171 ATG9AQ7Z3C6 839 aa13□□□□□ -0.33
LIN54-207ENST00000508171 CCDC39Q9UFE4 941 aa13□□□□□ -0.33
LIN54-207ENST00000508171 ZNF500O60304 480 aaPredicted RBP13□□□□□ -0.33
LIN54-207ENST00000508171 CYP21A2P08686 494 aa13□□□□□ -0.33
LIN54-207ENST00000508171 TOM1L2Q6ZVM7 507 aa13□□□□□ -0.33
LIN54-207ENST00000508171 TTC6Q86TZ1 520 aa13□□□□□ -0.33
LIN54-207ENST00000508171 ZCRB1Q8TBF4 217 aaKnown RBP13□□□□□ -0.33
LIN54-207ENST00000508171 ZNF594Q96JF6 807 aaPredicted RBP13□□□□□ -0.33
LIN54-207ENST00000508171 NEK1Q96PY6 1258 aa13□□□□□ -0.33
LIN54-207ENST00000508171 ALDH8A1Q9H2A2 487 aaPredicted RBP13□□□□□ -0.33
LIN54-207ENST00000508171 ZBTB3Q9H5J0 574 aa13□□□□□ -0.33
LIN54-207ENST00000508171 USP25Q9UHP3 1055 aa13□□□□□ -0.33
LIN54-207ENST00000508171 MCMDC2Q4G0Z9 681 aa12.99□□□□□ -0.33
LIN54-207ENST00000508171 TFIP11Q9UBB9 837 aaKnown RBP12.99□□□□□ -0.33
LIN54-207ENST00000508171 LRRC2Q9BYS8 371 aa12.99□□□□□ -0.33
LIN54-207ENST00000508171 CPDO75976 1380 aa12.99□□□□□ -0.33
LIN54-207ENST00000508171 GOLIM4O00461 696 aa12.98□□□□□ -0.33
LIN54-207ENST00000508171 JAK2O60674 1132 aa12.98□□□□□ -0.33
LIN54-207ENST00000508171 LETM1O95202 739 aaPredicted RBP12.98□□□□□ -0.33
LIN54-207ENST00000508171 PTMAP06454 111 aaKnown RBP12.98□□□□□ -0.33
LIN54-207ENST00000508171 HSPA2P54652 639 aa12.98□□□□□ -0.33
LIN54-207ENST00000508171 LRRC24Q50LG9 513 aa12.98□□□□□ -0.33
LIN54-207ENST00000508171 Q6ZUG5 572 aa12.98□□□□□ -0.33
LIN54-207ENST00000508171 FUCA2Q9BTY2 467 aa12.98□□□□□ -0.33
LIN54-207ENST00000508171 PRDM11Q9NQV5 511 aa12.98□□□□□ -0.33
LIN54-207ENST00000508171 CWC25Q9NXE8 425 aaPredicted RBP12.98□□□□□ -0.33
LIN54-207ENST00000508171 ABCC6O95255 1503 aa12.98□□□□□ -0.33
LIN54-207ENST00000508171 DCCP43146 1447 aa12.98□□□□□ -0.33
LIN54-207ENST00000508171 LAMB4A4D0S4 1761 aa12.98□□□□□ -0.33
LIN54-207ENST00000508171 CSPP1Q1MSJ5 1256 aa12.98□□□□□ -0.33
LIN54-207ENST00000508171 KBTBD3Q8NAB2 608 aa12.98□□□□□ -0.33
LIN54-207ENST00000508171 FAM184AQ8NB25 1140 aa12.98□□□□□ -0.33
LIN54-207ENST00000508171 A0A0G2JLW4 131 aa12.97□□□□□ -0.33
LIN54-207ENST00000508171 PDCP20941 246 aa12.97□□□□□ -0.33
LIN54-207ENST00000508171 KRT85P78386 507 aa12.97□□□□□ -0.33
LIN54-207ENST00000508171 KRT32Q14532 448 aa12.97□□□□□ -0.33
LIN54-207ENST00000508171 UVSSAQ2YD98 709 aa12.97□□□□□ -0.33
LIN54-207ENST00000508171 STOX1Q6ZVD7 989 aa12.97□□□□□ -0.33
LIN54-207ENST00000508171 BRINP3Q76B58 766 aa12.97□□□□□ -0.33
LIN54-207ENST00000508171 ZNF830Q96NB3 372 aaPredicted RBP12.97□□□□□ -0.33
LIN54-207ENST00000508171 U3KPZ7 1027 aaPredicted RBP12.97□□□□□ -0.33
LIN54-207ENST00000508171 WDR17Q8IZU2 1322 aa12.97□□□□□ -0.33
LIN54-207ENST00000508171 PCDH11XQ9BZA7 1347 aa12.97□□□□□ -0.33
LIN54-207ENST00000508171 PCDH11YQ9BZA8 1340 aa12.97□□□□□ -0.33
LIN54-207ENST00000508171 ADCY5O95622 1261 aa12.96□□□□□ -0.33
LIN54-207ENST00000508171 LIG1P18858 919 aa12.96□□□□□ -0.33
LIN54-207ENST00000508171 CAMK4Q16566 473 aa12.96□□□□□ -0.33
LIN54-207ENST00000508171 DDX11Q96FC9 970 aa12.96□□□□□ -0.33
LIN54-207ENST00000508171 PUS3Q9BZE2 481 aaKnown RBP12.96□□□□□ -0.33
LIN54-207ENST00000508171 PAG1Q9NWQ8 432 aa12.96□□□□□ -0.33
LIN54-207ENST00000508171 LAMA4Q16363 1823 aa12.96□□□□□ -0.33
LIN54-207ENST00000508171 GTF3C6Q969F1 213 aa12.96□□□□□ -0.33
LIN54-207ENST00000508171 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.96□□□□□ -0.33
LIN54-207ENST00000508171 ERVV-2B6SEH9 535 aa12.96□□□□□ -0.34
LIN54-207ENST00000508171 HSP90B1P14625 803 aaKnown RBP12.96□□□□□ -0.34
LIN54-207ENST00000508171 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.96□□□□□ -0.34
LIN54-207ENST00000508171 BRF1Q92994 677 aa12.96□□□□□ -0.34
LIN54-207ENST00000508171 R3HCC1Q9Y3T6 440 aaKnown RBP12.96□□□□□ -0.34
LIN54-207ENST00000508171 NUP188Q5SRE5 1749 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms