RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 PPEF1O14829 653 aaPredicted RBP17.27■□□□□ 0.36
PDCD6-204ENST00000506909 PDE8AO60658 829 aa17.27■□□□□ 0.36
PDCD6-204ENST00000506909 FKBP4Q02790 459 aaKnown RBP eCLIP17.27■□□□□ 0.36
PDCD6-204ENST00000506909 GCKRQ14397 625 aa17.27■□□□□ 0.36
PDCD6-204ENST00000506909 OLFM4Q6UX06 510 aa17.27■□□□□ 0.36
PDCD6-204ENST00000506909 SSH1Q8WYL5 1049 aa17.27■□□□□ 0.36
PDCD6-204ENST00000506909 LRRC37AA6NMS7 1700 aa17.27■□□□□ 0.35
PDCD6-204ENST00000506909 F6X3S4 739 aa17.26■□□□□ 0.35
PDCD6-204ENST00000506909 GRAPQ13588 217 aa17.26■□□□□ 0.35
PDCD6-204ENST00000506909 BEND3Q5T5X7 828 aa17.26■□□□□ 0.35
PDCD6-204ENST00000506909 GRAPLQ8TC17 118 aaPredicted RBP17.26■□□□□ 0.35
PDCD6-204ENST00000506909 PSMD1Q99460 953 aa17.26■□□□□ 0.35
PDCD6-204ENST00000506909 ATP6V0A2Q9Y487 856 aa17.26■□□□□ 0.35
PDCD6-204ENST00000506909 PTPRCP08575 1304 aa17.25■□□□□ 0.35
PDCD6-204ENST00000506909 TMC4Q7Z404 712 aa17.25■□□□□ 0.35
PDCD6-204ENST00000506909 SP8Q8IXZ3 490 aa17.25■□□□□ 0.35
PDCD6-204ENST00000506909 JARID2Q92833 1246 aaPredicted RBP17.25■□□□□ 0.35
PDCD6-204ENST00000506909 TMX4Q9H1E5 349 aaPredicted RBP17.25■□□□□ 0.35
PDCD6-204ENST00000506909 GPBP1L1Q9HC44 474 aaPredicted RBP17.25■□□□□ 0.35
PDCD6-204ENST00000506909 COL13A1Q5TAT6 717 aaPredicted RBP17.24■□□□□ 0.35
PDCD6-204ENST00000506909 UBE3BQ7Z3V4 1068 aa17.24■□□□□ 0.35
PDCD6-204ENST00000506909 ALDH1L1O75891 902 aa17.23■□□□□ 0.35
PDCD6-204ENST00000506909 BRPF1P55201 1214 aaPredicted RBP17.23■□□□□ 0.35
PDCD6-204ENST00000506909 CASP7P55210 303 aa17.23■□□□□ 0.35
PDCD6-204ENST00000506909 CCDC152Q4G0S7 254 aa17.23■□□□□ 0.35
PDCD6-204ENST00000506909 PLA2G12BQ9BX93 195 aa17.23■□□□□ 0.35
PDCD6-204ENST00000506909 ZBED9Q6R2W3 1325 aa17.22■□□□□ 0.35
PDCD6-204ENST00000506909 SPEF2Q9C093 1822 aa17.22■□□□□ 0.35
PDCD6-204ENST00000506909 TTLL11Q8NHH1 800 aa17.22■□□□□ 0.35
PDCD6-204ENST00000506909 ZNF526Q8TF50 670 aaPredicted RBP17.22■□□□□ 0.35
PDCD6-204ENST00000506909 CELF1Q92879 486 aaKnown RBP17.22■□□□□ 0.35
PDCD6-204ENST00000506909 SMC4Q9NTJ3 1288 aa17.22■□□□□ 0.35
PDCD6-204ENST00000506909 COL4A1P02462 1669 aa17.22■□□□□ 0.35
PDCD6-204ENST00000506909 KDM2BQ8NHM5 1336 aa17.21■□□□□ 0.35
PDCD6-204ENST00000506909 GLTPD2A6NH11 291 aa17.21■□□□□ 0.35
PDCD6-204ENST00000506909 CTSWP56202 376 aa17.21■□□□□ 0.35
PDCD6-204ENST00000506909 RPS8P62241 208 aaKnown RBP17.21■□□□□ 0.35
PDCD6-204ENST00000506909 BCL2L13Q9BXK5 485 aa17.21■□□□□ 0.35
PDCD6-204ENST00000506909 SRCIN1Q9C0H9 1055 aa17.21■□□□□ 0.35
PDCD6-204ENST00000506909 ZNF277Q9NRM2 450 aaPredicted RBP17.21■□□□□ 0.35
PDCD6-204ENST00000506909 IARSP41252 1262 aaKnown RBP17.2■□□□□ 0.34
PDCD6-204ENST00000506909 SLC4A10Q6U841 1118 aa17.2■□□□□ 0.34
PDCD6-204ENST00000506909 RTFDC1Q9BY42 306 aaPredicted RBP17.2■□□□□ 0.34
PDCD6-204ENST00000506909 VPS33BQ9H267 617 aa17.2■□□□□ 0.34
PDCD6-204ENST00000506909 SEC31BQ9NQW1 1179 aa17.2■□□□□ 0.34
PDCD6-204ENST00000506909 PCDH10Q9P2E7 1040 aa17.2■□□□□ 0.34
PDCD6-204ENST00000506909 LTBP1Q14766 1721 aa17.19■□□□□ 0.34
PDCD6-204ENST00000506909 RTL9Q8NET4 1388 aa17.19■□□□□ 0.34
PDCD6-204ENST00000506909 GRM8O00222 908 aa17.19■□□□□ 0.34
PDCD6-204ENST00000506909 RARSP54136 660 aaKnown RBP17.19■□□□□ 0.34
PDCD6-204ENST00000506909 DPY19L2Q6NUT2 758 aa17.19■□□□□ 0.34
PDCD6-204ENST00000506909 SLC51AQ86UW1 340 aa17.19■□□□□ 0.34
PDCD6-204ENST00000506909 TNS4Q8IZW8 715 aa17.19■□□□□ 0.34
PDCD6-204ENST00000506909 MPNDQ8N594 471 aa17.19■□□□□ 0.34
PDCD6-204ENST00000506909 SUPT20HQ8NEM7 779 aa17.19■□□□□ 0.34
PDCD6-204ENST00000506909 WDR90Q96KV7 1748 aa17.18■□□□□ 0.34
PDCD6-204ENST00000506909 CSF1RP07333 972 aa17.18■□□□□ 0.34
PDCD6-204ENST00000506909 DPP8Q6V1X1 898 aaPredicted RBP17.18■□□□□ 0.34
PDCD6-204ENST00000506909 KIF3CO14782 793 aa17.17■□□□□ 0.34
PDCD6-204ENST00000506909 JDP2Q8WYK2 163 aa17.17■□□□□ 0.34
PDCD6-204ENST00000506909 CCDC85AQ96PX6 553 aaPredicted RBP17.17■□□□□ 0.34
PDCD6-204ENST00000506909 CDC5LQ99459 802 aaKnown RBP17.17■□□□□ 0.34
PDCD6-204ENST00000506909 C9orf78Q9NZ63 289 aaPredicted RBP17.17■□□□□ 0.34
PDCD6-204ENST00000506909 SCN4AP35499 1836 aa17.17■□□□□ 0.34
PDCD6-204ENST00000506909 DUOX1Q9NRD9 1551 aa17.16■□□□□ 0.34
PDCD6-204ENST00000506909 FZD9O00144 591 aa17.16■□□□□ 0.34
PDCD6-204ENST00000506909 ANKRD18AQ8IVF6 992 aa17.16■□□□□ 0.34
PDCD6-204ENST00000506909 GREM2Q9H772 168 aa17.16■□□□□ 0.34
PDCD6-204ENST00000506909 NMRK2Q9NPI5 230 aa17.16■□□□□ 0.34
PDCD6-204ENST00000506909 UTYO14607 1347 aa17.16■□□□□ 0.34
PDCD6-204ENST00000506909 FOXO4P98177 505 aa17.15■□□□□ 0.34
PDCD6-204ENST00000506909 ARHGAP45Q92619 1136 aa17.15■□□□□ 0.34
PDCD6-204ENST00000506909 NOB1Q9ULX3 412 aaKnown RBP17.15■□□□□ 0.34
PDCD6-204ENST00000506909 NSFL1CQ9UNZ2 370 aaKnown RBP17.15■□□□□ 0.34
PDCD6-204ENST00000506909 COL4A5P29400 1685 aa17.15■□□□□ 0.34
PDCD6-204ENST00000506909 KIF16BQ96L93 1317 aa17.15■□□□□ 0.34
PDCD6-204ENST00000506909 PPIP5K2O43314 1243 aa17.14■□□□□ 0.33
PDCD6-204ENST00000506909 LARGE2Q8N3Y3 721 aa17.14■□□□□ 0.33
PDCD6-204ENST00000506909 API5Q9BZZ5 524 aaKnown RBP17.14■□□□□ 0.33
PDCD6-204ENST00000506909 RRAGCQ9HB90 399 aa17.14■□□□□ 0.33
PDCD6-204ENST00000506909 BSDC1Q9NW68 430 aaPredicted RBP17.14■□□□□ 0.33
PDCD6-204ENST00000506909 PODXL2Q9NZ53 605 aa17.14■□□□□ 0.33
PDCD6-204ENST00000506909 ITGA6P23229 1130 aa17.13■□□□□ 0.33
PDCD6-204ENST00000506909 KIAA2012Q0VF49 1180 aa17.13■□□□□ 0.33
PDCD6-204ENST00000506909 DDNO94850 711 aaPredicted RBP17.12■□□□□ 0.33
PDCD6-204ENST00000506909 NBPF7P0C2Y1 421 aaPredicted RBP17.12■□□□□ 0.33
PDCD6-204ENST00000506909 VEGFAP15692 232 aaPredicted RBP17.12■□□□□ 0.33
PDCD6-204ENST00000506909 GPSM2P81274 684 aa17.12■□□□□ 0.33
PDCD6-204ENST00000506909 AOC3Q16853 763 aa17.12■□□□□ 0.33
PDCD6-204ENST00000506909 FAM161AQ3B820 660 aa17.12■□□□□ 0.33
PDCD6-204ENST00000506909 NIM1KQ8IY84 436 aa17.12■□□□□ 0.33
PDCD6-204ENST00000506909 POLLQ9UGP5 575 aa17.12■□□□□ 0.33
PDCD6-204ENST00000506909 A0A1B0GUL6 1792 aa17.12■□□□□ 0.33
PDCD6-204ENST00000506909 POTECB2RU33 542 aa17.11■□□□□ 0.33
PDCD6-204ENST00000506909 TOMM70O94826 608 aa17.11■□□□□ 0.33
PDCD6-204ENST00000506909 IGHMBP2P38935 993 aaKnown RBP17.11■□□□□ 0.33
PDCD6-204ENST00000506909 CCT4P50991 539 aaKnown RBP17.11■□□□□ 0.33
PDCD6-204ENST00000506909 EPHA10Q5JZY3 1008 aa17.11■□□□□ 0.33
PDCD6-204ENST00000506909 LMBR1LQ6UX01 489 aa17.11■□□□□ 0.33
PDCD6-204ENST00000506909 TBC1D16Q8TBP0 767 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms