RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 ZNF280CQ8ND82 737 aa5.43□□□□□ -1.54
HMGB3P17-201ENST00000504195 GIMAP7Q8NHV1 300 aa5.43□□□□□ -1.54
HMGB3P17-201ENST00000504195 GSX2Q9BZM3 304 aa5.43□□□□□ -1.54
HMGB3P17-201ENST00000504195 PHACTR1Q9C0D0 580 aa5.43□□□□□ -1.54
HMGB3P17-201ENST00000504195 ARID4AP29374 1257 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P17-201ENST00000504195 PLAURQ03405 335 aa5.42□□□□□ -1.54
HMGB3P17-201ENST00000504195 VSIG10LQ86VR7 867 aa5.42□□□□□ -1.54
HMGB3P17-201ENST00000504195 ZNF358Q9NW07 568 aa5.42□□□□□ -1.54
HMGB3P17-201ENST00000504195 NCANO14594 1321 aa5.42□□□□□ -1.54
HMGB3P17-201ENST00000504195 WDR64B1ANS9 1081 aa5.41□□□□□ -1.54
HMGB3P17-201ENST00000504195 PRRG2O14669 202 aa5.41□□□□□ -1.54
HMGB3P17-201ENST00000504195 ZNF865P0CJ78 1059 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P17-201ENST00000504195 EIF2AK2P19525 551 aaKnown RBP5.41□□□□□ -1.54
HMGB3P17-201ENST00000504195 SOX11P35716 441 aa5.41□□□□□ -1.54
HMGB3P17-201ENST00000504195 PSMA6P60900 246 aaKnown RBP5.41□□□□□ -1.54
HMGB3P17-201ENST00000504195 MLLT1Q03111 559 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P17-201ENST00000504195 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
HMGB3P17-201ENST00000504195 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.41□□□□□ -1.54
HMGB3P17-201ENST00000504195 PIM2Q9P1W9 311 aa5.41□□□□□ -1.54
HMGB3P17-201ENST00000504195 HCN4Q9Y3Q4 1203 aa5.41□□□□□ -1.54
HMGB3P17-201ENST00000504195 PCDHGA11Q9Y5H2 935 aa5.41□□□□□ -1.54
HMGB3P17-201ENST00000504195 FARP2O94887 1054 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P17-201ENST00000504195 EPB42P16452 691 aa5.4□□□□□ -1.54
HMGB3P17-201ENST00000504195 HOXA10P31260 410 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P17-201ENST00000504195 EML3Q32P44 896 aa5.4□□□□□ -1.54
HMGB3P17-201ENST00000504195 ACAD11Q709F0 780 aa5.4□□□□□ -1.54
HMGB3P17-201ENST00000504195 DHX32Q7L7V1 743 aaKnown RBP5.4□□□□□ -1.54
HMGB3P17-201ENST00000504195 KSR1Q8IVT5 923 aa5.4□□□□□ -1.54
HMGB3P17-201ENST00000504195 MYRFLQ96LU7 910 aa5.4□□□□□ -1.54
HMGB3P17-201ENST00000504195 KCNF1Q9H3M0 494 aa5.4□□□□□ -1.54
HMGB3P17-201ENST00000504195 CCDC39Q9UFE4 941 aa5.4□□□□□ -1.54
HMGB3P17-201ENST00000504195 NOD1Q9Y239 953 aa5.4□□□□□ -1.54
HMGB3P17-201ENST00000504195 B8ZZF3 427 aa5.39□□□□□ -1.55
HMGB3P17-201ENST00000504195 GPLD1P80108 840 aa5.39□□□□□ -1.55
HMGB3P17-201ENST00000504195 SEMA3FQ13275 785 aa5.39□□□□□ -1.55
HMGB3P17-201ENST00000504195 WASHC4Q2M389 1173 aa5.39□□□□□ -1.55
HMGB3P17-201ENST00000504195 GDF6Q6KF10 455 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P17-201ENST00000504195 LILRA6Q6PI73 481 aa5.39□□□□□ -1.55
HMGB3P17-201ENST00000504195 CLEC10AQ8IUN9 316 aa5.39□□□□□ -1.55
HMGB3P17-201ENST00000504195 IL22RA1Q8N6P7 574 aa5.39□□□□□ -1.55
HMGB3P17-201ENST00000504195 AGBL5Q8NDL9 886 aa5.39□□□□□ -1.55
HMGB3P17-201ENST00000504195 TRPM4Q8TD43 1214 aa5.39□□□□□ -1.55
HMGB3P17-201ENST00000504195 SLC38A3Q99624 504 aa5.39□□□□□ -1.55
HMGB3P17-201ENST00000504195 SNRKQ9NRH2 765 aa5.39□□□□□ -1.55
HMGB3P17-201ENST00000504195 ATG3Q9NT62 314 aa5.39□□□□□ -1.55
HMGB3P17-201ENST00000504195 LEMD3Q9Y2U8 911 aa5.39□□□□□ -1.55
HMGB3P17-201ENST00000504195 MAP3K6O95382 1288 aa5.38□□□□□ -1.55
HMGB3P17-201ENST00000504195 HIRAP54198 1017 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P17-201ENST00000504195 EPHA4P54764 986 aa5.38□□□□□ -1.55
HMGB3P17-201ENST00000504195 KRT25Q7Z3Z0 450 aa5.38□□□□□ -1.55
HMGB3P17-201ENST00000504195 TNS4Q8IZW8 715 aa5.38□□□□□ -1.55
HMGB3P17-201ENST00000504195 FAM83CQ9BQN1 747 aa5.38□□□□□ -1.55
HMGB3P17-201ENST00000504195 KRTAP9-8Q9BYQ0 159 aa5.38□□□□□ -1.55
HMGB3P17-201ENST00000504195 TBC1D2BQ9UPU7 963 aa5.38□□□□□ -1.55
HMGB3P17-201ENST00000504195 BIN1O00499 593 aa5.37□□□□□ -1.55
HMGB3P17-201ENST00000504195 SART1O43290 800 aaKnown RBP5.37□□□□□ -1.55
HMGB3P17-201ENST00000504195 GTF2IP78347 998 aa5.37□□□□□ -1.55
HMGB3P17-201ENST00000504195 SETDB1Q15047 1291 aa5.37□□□□□ -1.55
HMGB3P17-201ENST00000504195 BEND4Q6ZU67 534 aa5.37□□□□□ -1.55
HMGB3P17-201ENST00000504195 HFE2Q6ZVN8 426 aa5.37□□□□□ -1.55
HMGB3P17-201ENST00000504195 FAM46AQ96IP4 442 aaKnown RBP5.37□□□□□ -1.55
HMGB3P17-201ENST00000504195 ZBTB42B2RXF5 422 aa5.36□□□□□ -1.55
HMGB3P17-201ENST00000504195 RARAP10276 462 aa5.36□□□□□ -1.55
HMGB3P17-201ENST00000504195 IRF5Q13568 498 aa5.36□□□□□ -1.55
HMGB3P17-201ENST00000504195 POTEAQ6S8J7 498 aa5.36□□□□□ -1.55
HMGB3P17-201ENST00000504195 FAM20CQ8IXL6 584 aa5.36□□□□□ -1.55
HMGB3P17-201ENST00000504195 RBSNQ9H1K0 784 aa5.36□□□□□ -1.55
HMGB3P17-201ENST00000504195 GHRHP01286 108 aa5.35□□□□□ -1.55
HMGB3P17-201ENST00000504195 PRNPP04156 253 aa5.35□□□□□ -1.55
HMGB3P17-201ENST00000504195 VAC14Q08AM6 782 aa5.35□□□□□ -1.55
HMGB3P17-201ENST00000504195 MSMPQ1L6U9 139 aa5.35□□□□□ -1.55
HMGB3P17-201ENST00000504195 IL27Q8NEV9 243 aa5.35□□□□□ -1.55
HMGB3P17-201ENST00000504195 FLCNQ8NFG4 579 aa5.35□□□□□ -1.55
HMGB3P17-201ENST00000504195 PLD4Q96BZ4 506 aa5.35□□□□□ -1.55
HMGB3P17-201ENST00000504195 MFSD14AQ96MC6 490 aa5.35□□□□□ -1.55
HMGB3P17-201ENST00000504195 OSBPL1AQ9BXW6 950 aa5.35□□□□□ -1.55
HMGB3P17-201ENST00000504195 MUC3BQ9H195 1237 aa5.35□□□□□ -1.55
HMGB3P17-201ENST00000504195 PAPLNO95428 1278 aa5.34□□□□□ -1.55
HMGB3P17-201ENST00000504195 BMP3P12645 472 aa5.34□□□□□ -1.55
HMGB3P17-201ENST00000504195 FOSL1P15407 271 aa5.34□□□□□ -1.55
HMGB3P17-201ENST00000504195 NFATC2IPQ8NCF5 419 aa5.34□□□□□ -1.55
HMGB3P17-201ENST00000504195 WISP1O95388 367 aa5.33□□□□□ -1.56
HMGB3P17-201ENST00000504195 BUD31P41223 144 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P17-201ENST00000504195 NRLP54845 237 aa5.33□□□□□ -1.56
HMGB3P17-201ENST00000504195 CPSF6Q16630 551 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB3P17-201ENST00000504195 IER5Q5VY09 327 aa5.33□□□□□ -1.56
HMGB3P17-201ENST00000504195 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P17-201ENST00000504195 TRIM50Q86XT4 487 aa5.33□□□□□ -1.56
HMGB3P17-201ENST00000504195 ALDH16A1Q8IZ83 802 aa5.33□□□□□ -1.56
HMGB3P17-201ENST00000504195 TSPAN10Q9H1Z9 355 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P17-201ENST00000504195 C11orf16Q9NQ32 467 aa5.33□□□□□ -1.56
HMGB3P17-201ENST00000504195 CD68P34810 354 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P17-201ENST00000504195 CACTIN-AS1Q8N1I8 211 aa5.32□□□□□ -1.56
HMGB3P17-201ENST00000504195 FBXL6Q8N531 539 aa5.32□□□□□ -1.56
HMGB3P17-201ENST00000504195 BSDC1Q9NW68 430 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P17-201ENST00000504195 ZFATQ9P243 1243 aa5.32□□□□□ -1.56
HMGB3P17-201ENST00000504195 HIF3AQ9Y2N7 669 aa5.32□□□□□ -1.56
HMGB3P17-201ENST00000504195 PPME1Q9Y570 386 aa5.32□□□□□ -1.56
HMGB3P17-201ENST00000504195 M0R2N6 131 aa5.31□□□□□ -1.56
HMGB3P17-201ENST00000504195 DUOXA2Q1HG44 320 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms