RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 MAP3K20Q9NYL2 800 aaKnown RBP7.15□□□□□ -1.26
CLCN3-204ENST00000504131 TDRD9Q8NDG6 1382 aaKnown RBP7.15□□□□□ -1.27
CLCN3-204ENST00000504131 CLIP1P30622 1438 aa7.15□□□□□ -1.27
CLCN3-204ENST00000504131 MYO1CO00159 1063 aa7.15□□□□□ -1.27
CLCN3-204ENST00000504131 HSPA1AP0DMV8 641 aaKnown RBP7.15□□□□□ -1.27
CLCN3-204ENST00000504131 HSPA1BP0DMV9 641 aaKnown RBP7.15□□□□□ -1.27
CLCN3-204ENST00000504131 HNRNPH2P55795 449 aaKnown RBP7.15□□□□□ -1.27
CLCN3-204ENST00000504131 KRT72Q14CN4 511 aa7.15□□□□□ -1.27
CLCN3-204ENST00000504131 DIXDC1Q155Q3 683 aa7.15□□□□□ -1.27
CLCN3-204ENST00000504131 TSNAXIP1Q2TAA8 658 aa7.15□□□□□ -1.27
CLCN3-204ENST00000504131 TMC6Q7Z403 805 aa7.15□□□□□ -1.27
CLCN3-204ENST00000504131 C11orf96Q7Z7L8 435 aa7.15□□□□□ -1.27
CLCN3-204ENST00000504131 SIX5Q8N196 739 aa7.15□□□□□ -1.27
CLCN3-204ENST00000504131 AFAP1Q8N556 730 aa7.15□□□□□ -1.27
CLCN3-204ENST00000504131 MYRIPQ8NFW9 859 aa7.15□□□□□ -1.27
CLCN3-204ENST00000504131 JADE2Q9NQC1 790 aa7.15□□□□□ -1.27
CLCN3-204ENST00000504131 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-204ENST00000504131 SMIM24O75264 130 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 DAAM2Q86T65 1068 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 FAM9CQ8IZT9 166 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 NME8Q8N427 588 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 KDM1AO60341 852 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 AP1G2O75843 785 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 LMNTD2Q8IXW0 634 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 API5Q9BZZ5 524 aaKnown RBP7.14□□□□□ -1.27
CLCN3-204ENST00000504131 CHPF2Q9P2E5 772 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 EFCAB13Q8IY85 973 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 RTF1Q92541 710 aaKnown RBP7.14□□□□□ -1.27
CLCN3-204ENST00000504131 JPH2Q9BR39 696 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-204ENST00000504131 CCSER2Q9H7U1 834 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 DKK3Q9UBP4 350 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 FGFR1OPO95684 399 aaKnown RBP7.14□□□□□ -1.27
CLCN3-204ENST00000504131 AKAP17AQ02040 695 aaKnown RBP7.14□□□□□ -1.27
CLCN3-204ENST00000504131 GJC2Q5T442 439 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-204ENST00000504131 KSR2Q6VAB6 950 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 CLASRPQ8N2M8 674 aaKnown RBP7.14□□□□□ -1.27
CLCN3-204ENST00000504131 TNIP2Q8NFZ5 429 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 TSPYL2Q9H2G4 693 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-204ENST00000504131 ZC4H2Q9NQZ6 224 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 CWC25Q9NXE8 425 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-204ENST00000504131 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.14□□□□□ -1.27
CLCN3-204ENST00000504131 COG6Q9Y2V7 657 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 KLHL33A6NCF5 533 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 DHX8Q14562 1220 aaKnown RBP7.14□□□□□ -1.27
CLCN3-204ENST00000504131 TNIP1Q15025 636 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 DHX38Q92620 1227 aaKnown RBP7.14□□□□□ -1.27
CLCN3-204ENST00000504131 DTNBP1Q96EV8 351 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 TTC14Q96N46 770 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 SERPINA10Q9UK55 444 aa7.14□□□□□ -1.27
CLCN3-204ENST00000504131 C9orf131Q5VYM1 1079 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 KAZNQ674X7 775 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 PPP1R21Q6ZMI0 780 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 ARHGEF25Q86VW2 580 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 NDUFAF2Q8N183 169 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.13□□□□□ -1.27
CLCN3-204ENST00000504131 KRT82Q9NSB4 513 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 ADD2P35612 726 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 ADCY2Q08462 1091 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 INAQ16352 499 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 SOGA3Q5TF21 947 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 SYT10Q6XYQ8 523 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 CACTINQ8WUQ7 758 aaKnown RBP7.13□□□□□ -1.27
CLCN3-204ENST00000504131 BCL2L13Q9BXK5 485 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 FIBPO43427 364 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 KIF22Q14807 665 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 KIAA0753Q2KHM9 967 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 LRRC43Q8N309 656 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 LZTS2Q9BRK4 669 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 VCX3BQ9H321 246 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 PDZRN3Q9UPQ7 1066 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 SART1O43290 800 aaKnown RBP7.13□□□□□ -1.27
CLCN3-204ENST00000504131 IL4RP24394 825 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 NFE2L2Q16236 605 aa7.13□□□□□ -1.27
CLCN3-204ENST00000504131 MAK16Q9BXY0 300 aaKnown RBP7.13□□□□□ -1.27
CLCN3-204ENST00000504131 PPFIA4O75335 1185 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 CD53P19397 219 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 SKOR1P84550 965 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 BNIP1Q12981 228 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 C10orf62Q5T681 223 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-204ENST00000504131 ARMC3Q5W041 872 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 GATAD2AQ86YP4 633 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 PEX5LQ8IYB4 626 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 GIPC2Q8TF65 315 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 ABTB1Q969K4 478 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-204ENST00000504131 IFT140Q96RY7 1462 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 FAM177BA6PVY3 158 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 RFC1P35251 1148 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-204ENST00000504131 CETN2P41208 172 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 KIF5AQ12840 1032 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 AIMP1Q12904 312 aaKnown RBP7.12□□□□□ -1.27
CLCN3-204ENST00000504131 POTEDQ86YR6 584 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 TRIM5Q9C035 493 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 TFIP11Q9UBB9 837 aaKnown RBP7.12□□□□□ -1.27
CLCN3-204ENST00000504131 TPPPO94811 219 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 TROVE2P10155 538 aaKnown RBP eCLIP7.12□□□□□ -1.27
CLCN3-204ENST00000504131 PLCB4Q15147 1175 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 ZNF397Q8NF99 534 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-204ENST00000504131 CTCFLQ8NI51 663 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-204ENST00000504131 UBXN4Q92575 508 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 JPH4Q96JJ6 628 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms