RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 MPRIPQ6WCQ1 1025 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 STK31Q9BXU1 1019 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 DDX19BQ9UMR2 479 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 SASH3O75995 380 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 SCP2P22307 547 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 HOXC9P31274 260 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 CCDC144BQ3MJ40 725 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 SRLQ86TD4 932 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 CCDC144CPQ8IYA2 1237 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 PDE4DQ08499 809 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 ZNF530Q6P9A1 599 aaPredicted RBP6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 CCDC186Q7Z3E2 898 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 USP48Q86UV5 1035 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 IFT57Q9NWB7 429 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 PNMA2Q9UL42 364 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 RRP15Q9Y3B9 282 aaKnown RBP6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 IVNS1ABPQ9Y6Y0 642 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 USP6P35125 1406 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 ATP7BP35670 1465 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 LTBP4Q8N2S1 1624 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 VAMP4O75379 141 aa6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 REC8O95072 547 aa6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 ANXA1P04083 346 aa6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 GSPT1P15170 499 aaKnown RBP6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 CLCN6P51797 869 aa6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 ZSCAN26Q16670 478 aa6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 ZNF397Q8NF99 534 aaPredicted RBP6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 PLSCR2Q9NRY7 297 aa6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 TTC21AQ8NDW8 1320 aa6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 SMTNL1A8MU46 457 aa6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 GCP02774 474 aa6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 PNMA6AP0CW24 399 aaPredicted RBP6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 CHAF1AQ13111 956 aaPredicted RBP6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 C1orf141Q5JVX7 400 aa6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 CALR3Q96L12 384 aaKnown RBP6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 CPSF1Q10570 1443 aaKnown RBP6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 AXDND1Q5T1B0 1012 aaPredicted RBP6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 TTLL5Q6EMB2 1281 aa6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 C16orf71Q8IYS4 520 aaPredicted RBP6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 STRN4Q9NRL3 753 aa6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 TRMT1Q9NXH9 659 aaKnown RBP6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 GABBR1Q9UBS5 961 aa6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 ZNF330Q9Y3S2 320 aaPredicted RBP6.82□□□□□ -1.32
SOX2-OT-218ENST00000498731 UBR1Q8IWV7 1749 aa6.81□□□□□ -1.32
SOX2-OT-218ENST00000498731 GOLIM4O00461 696 aa6.81□□□□□ -1.32
SOX2-OT-218ENST00000498731 TTC19Q6DKK2 380 aaPredicted RBP6.81□□□□□ -1.32
SOX2-OT-218ENST00000498731 CCDC112Q8NEF3 446 aa6.81□□□□□ -1.32
SOX2-OT-218ENST00000498731 CCDC34Q96HJ3 373 aa6.81□□□□□ -1.32
SOX2-OT-218ENST00000498731 GNAT3A8MTJ3 354 aa6.81□□□□□ -1.32
SOX2-OT-218ENST00000498731 ATP2B1P20020 1258 aa6.81□□□□□ -1.32
SOX2-OT-218ENST00000498731 PPP2R5AQ15172 486 aa6.81□□□□□ -1.32
SOX2-OT-218ENST00000498731 SKIDA1Q1XH10 827 aa6.81□□□□□ -1.32
SOX2-OT-218ENST00000498731 NBPF6Q5VWK0 638 aa6.81□□□□□ -1.32
SOX2-OT-218ENST00000498731 POTEAQ6S8J7 498 aa6.81□□□□□ -1.32
SOX2-OT-218ENST00000498731 OTUD7AQ8TE49 926 aaPredicted RBP6.81□□□□□ -1.32
SOX2-OT-218ENST00000498731 CACTINQ8WUQ7 758 aaKnown RBP6.81□□□□□ -1.32
SOX2-OT-218ENST00000498731 NBPF4Q96M43 638 aa6.81□□□□□ -1.32
SOX2-OT-218ENST00000498731 LARP6Q9BRS8 491 aaKnown RBP6.81□□□□□ -1.32
SOX2-OT-218ENST00000498731 AIMP1Q12904 312 aaKnown RBP6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 RBM26Q5T8P6 1007 aaKnown RBP6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 LUZP1Q86V48 1076 aa6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 DONSONQ9NYP3 566 aa6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 FLT4P35916 1363 aa6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 SATB1Q01826 763 aa6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 ARMC3Q5W041 872 aa6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 ANKRD24Q8TF21 1146 aa6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 RAPGEF4Q8WZA2 1011 aa6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 TSPYL1Q9H0U9 437 aa6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 CNPY2Q9Y2B0 182 aa6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 NUCB2P80303 420 aa6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 CACNB1Q02641 598 aaPredicted RBP6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 NUCB1Q02818 461 aa6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 FAM182BQ5T319 152 aa6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 FUCA2Q9BTY2 467 aa6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 QTRT2Q9H974 415 aaKnown RBP6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 LGR6Q9HBX8 967 aa6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 PLEKHG2Q9H7P9 1386 aa6.8□□□□□ -1.32
SOX2-OT-218ENST00000498731 A0A087WWV3 80 aa6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 FANCGO15287 622 aa6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 BIRC2Q13490 618 aa6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 G2E3Q7L622 706 aa6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 MRPL50Q8N5N7 158 aaKnown RBP6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 API5Q9BZZ5 524 aaKnown RBP6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 RBM5P52756 815 aaKnown RBP eCLIP6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 EVA1CP58658 441 aa6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 MUM1L1Q5H9M0 696 aa6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 HDGFL1Q5TGJ6 251 aa6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 CHD1LQ86WJ1 897 aa6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 KCNH5Q8NCM2 988 aa6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 KAT2BQ92831 832 aa6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 PMM1Q92871 262 aa6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 SRRTQ9BXP5 876 aaKnown RBP6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 ZBTB12Q9Y330 459 aaPredicted RBP6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 CHMP3Q9Y3E7 222 aa6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 IL16Q14005 1332 aa6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 MAP2P11137 1827 aaKnown RBP6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 H2AFXP16104 143 aaPredicted RBP6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 GSCP56915 257 aaPredicted RBP6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 TPD52L1Q16890 204 aaPredicted RBP6.79□□□□□ -1.32
SOX2-OT-218ENST00000498731 DCAF8Q5TAQ9 597 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms