RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 NUDT18Q6ZVK8 323 aa6.75□□□□□ -1.33
PHC3-217ENST00000497658 STK31Q9BXU1 1019 aa6.75□□□□□ -1.33
PHC3-217ENST00000497658 CGNQ9P2M7 1197 aaKnown RBP6.75□□□□□ -1.33
PHC3-217ENST00000497658 ELP1O95163 1332 aa6.75□□□□□ -1.33
PHC3-217ENST00000497658 CCDC171Q6TFL3 1326 aa6.75□□□□□ -1.33
PHC3-217ENST00000497658 NRKQ7Z2Y5 1582 aa6.74□□□□□ -1.33
PHC3-217ENST00000497658 SMTNL1A8MU46 457 aa6.74□□□□□ -1.33
PHC3-217ENST00000497658 RNF223E7ERA6 249 aa6.74□□□□□ -1.33
PHC3-217ENST00000497658 WASLO00401 505 aaPredicted RBP6.74□□□□□ -1.33
PHC3-217ENST00000497658 SGSM2O43147 1006 aa6.74□□□□□ -1.33
PHC3-217ENST00000497658 SPRYD7Q5W111 196 aa6.74□□□□□ -1.33
PHC3-217ENST00000497658 ZNF598Q86UK7 904 aaKnown RBP6.74□□□□□ -1.33
PHC3-217ENST00000497658 KCNF1Q9H3M0 494 aa6.74□□□□□ -1.33
PHC3-217ENST00000497658 EXOC6BQ9Y2D4 811 aa6.74□□□□□ -1.33
PHC3-217ENST00000497658 CRB1P82279 1406 aa6.74□□□□□ -1.33
PHC3-217ENST00000497658 NEO1Q92859 1461 aa6.74□□□□□ -1.33
PHC3-217ENST00000497658 KRT24Q2M2I5 525 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 VPS53Q5VIR6 699 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 SULT6B1Q6IMI4 303 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 SLC4A10Q6U841 1118 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 NOL8Q76FK4 1167 aaKnown RBP6.73□□□□□ -1.33
PHC3-217ENST00000497658 NME9Q86XW9 330 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 SIRT1Q96EB6 747 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 TM6SF1Q9BZW5 370 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 SNX14Q9Y5W7 946 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 PREX1Q8TCU6 1659 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 PXDNLA1KZ92 1463 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 TTC21BQ7Z4L5 1316 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 HTATSF1O43719 755 aaKnown RBP6.73□□□□□ -1.33
PHC3-217ENST00000497658 NEMFO60524 1076 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 PDCP20941 246 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 AK2P54819 239 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 PLCB2Q00722 1185 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 MAP3K11Q16584 847 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 FOXD4L6Q3SYB3 417 aaPredicted RBP6.73□□□□□ -1.33
PHC3-217ENST00000497658 CCDC30Q5VVM6 783 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 GIMAP6Q6P9H5 292 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 FOXD4L3Q6VB84 417 aaPredicted RBP6.73□□□□□ -1.33
PHC3-217ENST00000497658 CREBRFQ8IUR6 639 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 CNTROBQ8N137 903 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 TSC1Q92574 1164 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 PYCARDQ9ULZ3 195 aa6.73□□□□□ -1.33
PHC3-217ENST00000497658 SPDYE16A6NNV3 312 aaPredicted RBP6.72□□□□□ -1.33
PHC3-217ENST00000497658 FIBPO43427 364 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 U2AF2P26368 475 aaKnown RBP eCLIP6.72□□□□□ -1.33
PHC3-217ENST00000497658 KRT85P78386 507 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 EIF4A2Q14240 407 aaKnown RBP6.72□□□□□ -1.33
PHC3-217ENST00000497658 RRS1Q15050 365 aaKnown RBP6.72□□□□□ -1.33
PHC3-217ENST00000497658 HSP90AB4PQ58FF6 505 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 RUFY3Q7L099 469 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 SLF2Q8IX21 1173 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 C17orf53Q8N3J3 647 aaPredicted RBP6.72□□□□□ -1.33
PHC3-217ENST00000497658 SSH3Q8TE77 659 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 RUFY2Q8WXA3 655 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 SCAND2PQ9GZW5 306 aaPredicted RBP6.72□□□□□ -1.33
PHC3-217ENST00000497658 HYPKQ9NX55 129 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 CTNNA3Q9UI47 895 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 MTMR6Q9Y217 621 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 DIP2CQ9Y2E4 1556 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 TCHHQ07283 1943 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 MON2Q7Z3U7 1717 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 PNMA6EA0A0J9YXQ4 647 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 CDC25BP30305 580 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 NCBP1Q09161 790 aaKnown RBP6.72□□□□□ -1.33
PHC3-217ENST00000497658 SWT1Q5T5J6 900 aaKnown RBP6.72□□□□□ -1.33
PHC3-217ENST00000497658 RBM43Q6ZSC3 357 aaKnown RBP6.72□□□□□ -1.33
PHC3-217ENST00000497658 MCM10Q7L590 875 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 CCDC112Q8NEF3 446 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 JARID2Q92833 1246 aaPredicted RBP6.72□□□□□ -1.33
PHC3-217ENST00000497658 CHMP4AQ9BY43 222 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 LSG1Q9H089 658 aaKnown RBP6.72□□□□□ -1.33
PHC3-217ENST00000497658 NUP62CLQ9H1M0 184 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 DDX19AQ9NUU7 478 aaKnown RBP6.72□□□□□ -1.33
PHC3-217ENST00000497658 BABAM1Q9NWV8 329 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 TSPYL4Q9UJ04 414 aa6.72□□□□□ -1.33
PHC3-217ENST00000497658 DDX41Q9UJV9 622 aaKnown RBP6.72□□□□□ -1.33
PHC3-217ENST00000497658 MORC2Q9Y6X9 1032 aaPredicted RBP6.72□□□□□ -1.33
PHC3-217ENST00000497658 MAP3K5Q99683 1374 aa6.71□□□□□ -1.33
PHC3-217ENST00000497658 TTC41PQ6P2S7 1318 aa6.71□□□□□ -1.34
PHC3-217ENST00000497658 NPHP3Q7Z494 1330 aa6.71□□□□□ -1.34
PHC3-217ENST00000497658 SPATA31D1Q6ZQQ2 1576 aa6.71□□□□□ -1.34
PHC3-217ENST00000497658 CCDC66A2RUB6 948 aa6.71□□□□□ -1.34
PHC3-217ENST00000497658 F6X3S4 739 aa6.71□□□□□ -1.34
PHC3-217ENST00000497658 AP5Z1O43299 807 aa6.71□□□□□ -1.34
PHC3-217ENST00000497658 GJB2P29033 226 aa6.71□□□□□ -1.34
PHC3-217ENST00000497658 DNM1Q05193 864 aaKnown RBP6.71□□□□□ -1.34
PHC3-217ENST00000497658 FLIIQ13045 1269 aa6.71□□□□□ -1.34
PHC3-217ENST00000497658 TSHZ3Q63HK5 1081 aa6.71□□□□□ -1.34
PHC3-217ENST00000497658 PLA2G4DQ86XP0 818 aa6.71□□□□□ -1.34
PHC3-217ENST00000497658 UNC5CLQ8IV45 518 aa6.71□□□□□ -1.34
PHC3-217ENST00000497658 MPNDQ8N594 471 aa6.71□□□□□ -1.34
PHC3-217ENST00000497658 KCNB2Q92953 911 aa6.71□□□□□ -1.34
PHC3-217ENST00000497658 NUDT16Q96DE0 195 aaKnown RBP6.71□□□□□ -1.34
PHC3-217ENST00000497658 KIF1BPQ96EK5 621 aa6.71□□□□□ -1.34
PHC3-217ENST00000497658 CYP46A1Q9Y6A2 500 aa6.71□□□□□ -1.34
PHC3-217ENST00000497658 MYO5BQ9ULV0 1848 aa6.71□□□□□ -1.34
PHC3-217ENST00000497658 ADGRL3Q9HAR2 1447 aa6.71□□□□□ -1.34
PHC3-217ENST00000497658 C3P01024 1663 aa6.71□□□□□ -1.34
PHC3-217ENST00000497658 USP42Q9H9J4 1324 aaKnown RBP6.71□□□□□ -1.34
PHC3-217ENST00000497658 ZBTB7CA1YPR0 619 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms