RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 CFAP45Q9UL16 551 aa15.17■□□□□ 0.02
VEGFA-215ENST00000497139 XRN1Q8IZH2 1706 aaKnown RBP15.16■□□□□ 0.02
VEGFA-215ENST00000497139 FAM83GA6ND36 823 aa15.16■□□□□ 0.02
VEGFA-215ENST00000497139 SOX12O15370 315 aa15.16■□□□□ 0.02
VEGFA-215ENST00000497139 PGBD1Q96JS3 809 aa15.16■□□□□ 0.02
VEGFA-215ENST00000497139 ARFGAP3Q9NP61 516 aa15.16■□□□□ 0.02
VEGFA-215ENST00000497139 SLC52A1Q9NWF4 448 aa15.16■□□□□ 0.02
VEGFA-215ENST00000497139 LCMT1Q9UIC8 334 aa15.16■□□□□ 0.02
VEGFA-215ENST00000497139 JRKLQ9Y4A0 524 aa15.16■□□□□ 0.02
VEGFA-215ENST00000497139 SFPQP23246 707 aaKnown RBP eCLIP15.16■□□□□ 0.02
VEGFA-215ENST00000497139 PSEN1P49768 467 aa15.16■□□□□ 0.02
VEGFA-215ENST00000497139 LRRN4CLQ8ND94 238 aa15.16■□□□□ 0.02
VEGFA-215ENST00000497139 USP42Q9H9J4 1324 aaKnown RBP15.16■□□□□ 0.02
VEGFA-215ENST00000497139 ZKSCAN1P17029 563 aaPredicted RBP15.16■□□□□ 0.02
VEGFA-215ENST00000497139 PSMA5P28066 241 aa15.16■□□□□ 0.02
VEGFA-215ENST00000497139 PSME1Q06323 249 aa15.16■□□□□ 0.02
VEGFA-215ENST00000497139 FCHSD1Q86WN1 690 aa15.16■□□□□ 0.02
VEGFA-215ENST00000497139 BPIFA3Q9BQP9 254 aa15.16■□□□□ 0.02
VEGFA-215ENST00000497139 ZSCAN16Q9H4T2 348 aaPredicted RBP15.16■□□□□ 0.02
VEGFA-215ENST00000497139 ADAM21Q9UKJ8 722 aa15.16■□□□□ 0.02
VEGFA-215ENST00000497139 MAP3K5Q99683 1374 aa15.15■□□□□ 0.02
VEGFA-215ENST00000497139 PNMA6EA0A0J9YXQ4 647 aa15.15■□□□□ 0.02
VEGFA-215ENST00000497139 NBPF11Q86T75 865 aa15.15■□□□□ 0.02
VEGFA-215ENST00000497139 PPM1EQ8WY54 764 aa15.15■□□□□ 0.02
VEGFA-215ENST00000497139 LARP6Q9BRS8 491 aaKnown RBP15.15■□□□□ 0.02
VEGFA-215ENST00000497139 MKRN1Q9UHC7 482 aaKnown RBP15.15■□□□□ 0.02
VEGFA-215ENST00000497139 SLC4A10Q6U841 1118 aa15.14■□□□□ 0.01
VEGFA-215ENST00000497139 FERMT3Q86UX7 667 aa15.14■□□□□ 0.01
VEGFA-215ENST00000497139 SUGP1Q8IWZ8 645 aaKnown RBP15.14■□□□□ 0.01
VEGFA-215ENST00000497139 EDC4Q6P2E9 1401 aaKnown RBP15.14■□□□□ 0.01
VEGFA-215ENST00000497139 SASH3O75995 380 aa15.14■□□□□ 0.01
VEGFA-215ENST00000497139 IDI1Q13907 227 aa15.14■□□□□ 0.01
VEGFA-215ENST00000497139 HOMER1Q86YM7 354 aa15.14■□□□□ 0.01
VEGFA-215ENST00000497139 SSH3Q8TE77 659 aa15.14■□□□□ 0.01
VEGFA-215ENST00000497139 MPHOSPH8Q99549 860 aa15.14■□□□□ 0.01
VEGFA-215ENST00000497139 ADCY9O60503 1353 aa15.13■□□□□ 0.01
VEGFA-215ENST00000497139 TMEM131LA2VDJ0 1609 aa15.13■□□□□ 0.01
VEGFA-215ENST00000497139 ATP2B1P20020 1258 aa15.13■□□□□ 0.01
VEGFA-215ENST00000497139 DEF6Q9H4E7 631 aa15.13■□□□□ 0.01
VEGFA-215ENST00000497139 TPCN1Q9ULQ1 816 aa15.13■□□□□ 0.01
VEGFA-215ENST00000497139 DLC1Q96QB1 1528 aa15.13■□□□□ 0.01
VEGFA-215ENST00000497139 CACNA1FO60840 1977 aa15.13■□□□□ 0.01
VEGFA-215ENST00000497139 SMC2O95347 1197 aa15.13■□□□□ 0.01
VEGFA-215ENST00000497139 EVCP57679 992 aa15.13■□□□□ 0.01
VEGFA-215ENST00000497139 DCTN1Q14203 1278 aa15.13■□□□□ 0.01
VEGFA-215ENST00000497139 ATL3Q6DD88 541 aa15.13■□□□□ 0.01
VEGFA-215ENST00000497139 RABGGTAQ92696 567 aa15.13■□□□□ 0.01
VEGFA-215ENST00000497139 FUT8Q9BYC5 575 aa15.13■□□□□ 0.01
VEGFA-215ENST00000497139 DIP2BQ9P265 1576 aa15.12■□□□□ 0.01
VEGFA-215ENST00000497139 CPP00450 1065 aa15.12■□□□□ 0.01
VEGFA-215ENST00000497139 LMAN1P49257 510 aa15.12■□□□□ 0.01
VEGFA-215ENST00000497139 NECTIN1Q15223 517 aa15.12■□□□□ 0.01
VEGFA-215ENST00000497139 SWT1Q5T5J6 900 aaKnown RBP15.12■□□□□ 0.01
VEGFA-215ENST00000497139 SIRT1Q96EB6 747 aa15.12■□□□□ 0.01
VEGFA-215ENST00000497139 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
VEGFA-215ENST00000497139 TFIP11Q9UBB9 837 aaKnown RBP15.12■□□□□ 0.01
VEGFA-215ENST00000497139 CRB1P82279 1406 aa15.12■□□□□ 0.01
VEGFA-215ENST00000497139 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.12■□□□□ 0.01
VEGFA-215ENST00000497139 GOLGA6L9A6NEM1 432 aa15.12■□□□□ 0.01
VEGFA-215ENST00000497139 SEC31AO94979 1220 aaKnown RBP15.12■□□□□ 0.01
VEGFA-215ENST00000497139 CPA1P15085 419 aa15.12■□□□□ 0.01
VEGFA-215ENST00000497139 BRD3Q15059 726 aa15.12■□□□□ 0.01
VEGFA-215ENST00000497139 ARMCX5Q6P1M9 558 aa15.12■□□□□ 0.01
VEGFA-215ENST00000497139 STAG3Q9UJ98 1225 aa15.12■□□□□ 0.01
VEGFA-215ENST00000497139 EMILIN1Q9Y6C2 1016 aa15.12■□□□□ 0.01
VEGFA-215ENST00000497139 MYH15Q9Y2K3 1946 aa15.12■□□□□ 0.01
VEGFA-215ENST00000497139 CCDC151A5D8V7 595 aa15.11■□□□□ 0.01
VEGFA-215ENST00000497139 RESTQ13127 1097 aa15.11■□□□□ 0.01
VEGFA-215ENST00000497139 SAFB2Q14151 953 aaKnown RBP eCLIP15.11■□□□□ 0.01
VEGFA-215ENST00000497139 ADCK5Q3MIX3 580 aa15.11■□□□□ 0.01
VEGFA-215ENST00000497139 FAM173BQ6P4H8 233 aa15.11■□□□□ 0.01
VEGFA-215ENST00000497139 TRIM65Q6PJ69 517 aa15.11■□□□□ 0.01
VEGFA-215ENST00000497139 CCDC73Q6ZRK6 1079 aa15.11■□□□□ 0.01
VEGFA-215ENST00000497139 NECAB1Q8N987 351 aa15.11■□□□□ 0.01
VEGFA-215ENST00000497139 PARP3Q9Y6F1 533 aa15.11■□□□□ 0.01
VEGFA-215ENST00000497139 MAP2K7O14733 419 aa15.11■□□□□ 0.01
VEGFA-215ENST00000497139 GLRX3O76003 335 aaKnown RBP15.11■□□□□ 0.01
VEGFA-215ENST00000497139 GYS2P54840 703 aa15.11■□□□□ 0.01
VEGFA-215ENST00000497139 CWC27Q6UX04 472 aaKnown RBP15.11■□□□□ 0.01
VEGFA-215ENST00000497139 RSRC2Q7L4I2 434 aaKnown RBP15.11■□□□□ 0.01
VEGFA-215ENST00000497139 CABP1Q9NZU7 370 aa15.11■□□□□ 0.01
VEGFA-215ENST00000497139 HDAC5Q9UQL6 1122 aa15.11■□□□□ 0.01
VEGFA-215ENST00000497139 FAM208AQ9UK61 1670 aaKnown RBP15.11■□□□□ 0.01
VEGFA-215ENST00000497139 MYO5BQ9ULV0 1848 aa15.11■□□□□ 0.01
VEGFA-215ENST00000497139 ZSCAN12O43309 604 aa15.1■□□□□ 0.01
VEGFA-215ENST00000497139 KINO60870 393 aaKnown RBP15.1■□□□□ 0.01
VEGFA-215ENST00000497139 PRPF40BQ6NWY9 871 aaKnown RBP15.1■□□□□ 0.01
VEGFA-215ENST00000497139 HNRNPLLQ8WVV9 542 aaKnown RBP15.1■□□□□ 0.01
VEGFA-215ENST00000497139 ZNF622Q969S3 477 aaKnown RBP eCLIP15.1■□□□□ 0.011e-27■□□□□ 9
VEGFA-215ENST00000497139 CARD6Q9BX69 1037 aa15.1■□□□□ 0.01
VEGFA-215ENST00000497139 ZCCHC17Q9NP64 241 aaKnown RBP15.1■□□□□ 0.01
VEGFA-215ENST00000497139 MINK1Q8N4C8 1332 aaPredicted RBP15.1■□□□□ 0.01
VEGFA-215ENST00000497139 LOC102724159A0A0B4J2E5 919 aa15.1■□□□□ 0.01
VEGFA-215ENST00000497139 F6X3S4 739 aa15.1■□□□□ 0.01
VEGFA-215ENST00000497139 TUBB4BP68371 445 aa15.1■□□□□ 0.01
VEGFA-215ENST00000497139 PWP2Q15269 919 aaKnown RBP15.1■□□□□ 0.01
VEGFA-215ENST00000497139 LARP1Q6PKG0 1096 aaKnown RBP15.1■□□□□ 0.01
VEGFA-215ENST00000497139 CCDC91Q7Z6B0 441 aa15.1■□□□□ 0.01
VEGFA-215ENST00000497139 AOPEPQ8N6M6 819 aa15.1■□□□□ 0.01
VEGFA-215ENST00000497139 PRAM1Q96QH2 718 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms