RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 RFX5P48382 616 aaPredicted RBP13.78□□□□□ -0.2
CDCA7-208ENST00000496441 SIPA1L3O60292 1781 aaPredicted RBP13.78□□□□□ -0.2
CDCA7-208ENST00000496441 SCN11AQ9UI33 1791 aa13.78□□□□□ -0.2
CDCA7-208ENST00000496441 DDX11Q96FC9 970 aa13.78□□□□□ -0.2
CDCA7-208ENST00000496441 PUS3Q9BZE2 481 aaKnown RBP13.78□□□□□ -0.2
CDCA7-208ENST00000496441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.78□□□□□ -0.25e-7■■■■□ 19.4
CDCA7-208ENST00000496441 OVOS2A0A0G2JMS6 1433 aa13.78□□□□□ -0.2
CDCA7-208ENST00000496441 HSP90AB3PQ58FF7 597 aa13.77□□□□□ -0.2
CDCA7-208ENST00000496441 COPRSQ9NQ92 184 aa13.77□□□□□ -0.2
CDCA7-208ENST00000496441 STRCP1A6NGW2 1772 aa13.77□□□□□ -0.2
CDCA7-208ENST00000496441 MSNP26038 577 aaKnown RBP13.77□□□□□ -0.21
CDCA7-208ENST00000496441 RNF20Q5VTR2 975 aa13.77□□□□□ -0.21
CDCA7-208ENST00000496441 CHST3Q7LGC8 479 aa13.77□□□□□ -0.21
CDCA7-208ENST00000496441 SYNE4Q8N205 404 aa13.77□□□□□ -0.21
CDCA7-208ENST00000496441 TFIP11Q9UBB9 837 aaKnown RBP13.77□□□□□ -0.21
CDCA7-208ENST00000496441 ALS2Q96Q42 1657 aa13.77□□□□□ -0.21
CDCA7-208ENST00000496441 ZNF335Q9H4Z2 1342 aaPredicted RBP13.77□□□□□ -0.21
CDCA7-208ENST00000496441 A0A0G2JLW4 131 aa13.77□□□□□ -0.21
CDCA7-208ENST00000496441 HIP1O00291 1037 aa13.77□□□□□ -0.21
CDCA7-208ENST00000496441 FKBP4Q02790 459 aaKnown RBP eCLIP13.77□□□□□ -0.21
CDCA7-208ENST00000496441 CDC37L1Q7L3B6 337 aa13.77□□□□□ -0.21
CDCA7-208ENST00000496441 CWC25Q9NXE8 425 aaPredicted RBP13.77□□□□□ -0.21
CDCA7-208ENST00000496441 TAF5LO75529 589 aa13.76□□□□□ -0.21
CDCA7-208ENST00000496441 GPTP24298 496 aa13.76□□□□□ -0.21
CDCA7-208ENST00000496441 FAM89AQ96GI7 184 aa13.76□□□□□ -0.21
CDCA7-208ENST00000496441 TSPY26PQ9H489 355 aa13.76□□□□□ -0.21
CDCA7-208ENST00000496441 SLAIN2Q9P270 581 aa13.76□□□□□ -0.21
CDCA7-208ENST00000496441 AFDNP55196 1824 aaKnown RBP13.76□□□□□ -0.21
CDCA7-208ENST00000496441 GIMAP6Q6P9H5 292 aa13.76□□□□□ -0.21
CDCA7-208ENST00000496441 MTMR6Q9Y217 621 aa13.76□□□□□ -0.21
CDCA7-208ENST00000496441 COL15A1P39059 1388 aa13.75□□□□□ -0.21
CDCA7-208ENST00000496441 KIF1AQ12756 1690 aa13.75□□□□□ -0.21
CDCA7-208ENST00000496441 PTMAP06454 111 aaKnown RBP13.75□□□□□ -0.21
CDCA7-208ENST00000496441 IL2RBP14784 551 aa13.75□□□□□ -0.21
CDCA7-208ENST00000496441 PSMA5P28066 241 aa13.75□□□□□ -0.21
CDCA7-208ENST00000496441 SYAP1Q96A49 352 aaPredicted RBP13.75□□□□□ -0.21
CDCA7-208ENST00000496441 WDR17Q8IZU2 1322 aa13.75□□□□□ -0.21
CDCA7-208ENST00000496441 PCDH11XQ9BZA7 1347 aa13.75□□□□□ -0.21
CDCA7-208ENST00000496441 PCDH11YQ9BZA8 1340 aa13.75□□□□□ -0.21
CDCA7-208ENST00000496441 JAK2O60674 1132 aa13.75□□□□□ -0.21
CDCA7-208ENST00000496441 HCLS1P14317 486 aaPredicted RBP13.75□□□□□ -0.21
CDCA7-208ENST00000496441 ATP5JP18859 108 aa13.75□□□□□ -0.21
CDCA7-208ENST00000496441 FOXO4P98177 505 aa13.75□□□□□ -0.21
CDCA7-208ENST00000496441 CEBPZQ03701 1054 aaKnown RBP13.75□□□□□ -0.21
CDCA7-208ENST00000496441 CAMK4Q16566 473 aa13.75□□□□□ -0.21
CDCA7-208ENST00000496441 ASAP1Q9ULH1 1129 aa13.75□□□□□ -0.21
CDCA7-208ENST00000496441 EPB41L2O43491 1005 aaKnown RBP13.74□□□□□ -0.21
CDCA7-208ENST00000496441 GORABQ5T7V8 394 aa13.74□□□□□ -0.21
CDCA7-208ENST00000496441 PPP1R9BQ96SB3 815 aa13.74□□□□□ -0.21
CDCA7-208ENST00000496441 RPS6KB1P23443 525 aa13.74□□□□□ -0.21
CDCA7-208ENST00000496441 FAM177BA6PVY3 158 aa13.74□□□□□ -0.21
CDCA7-208ENST00000496441 CYP21A2P08686 494 aa13.74□□□□□ -0.21
CDCA7-208ENST00000496441 TOB2Q14106 344 aaPredicted RBP13.74□□□□□ -0.21
CDCA7-208ENST00000496441 Q6ZUG5 572 aa13.74□□□□□ -0.21
CDCA7-208ENST00000496441 IL17RAQ96F46 866 aa13.74□□□□□ -0.21
CDCA7-208ENST00000496441 ZSCAN31Q96LW9 406 aaPredicted RBP13.74□□□□□ -0.21
CDCA7-208ENST00000496441 CASP7P55210 303 aa13.73□□□□□ -0.21
CDCA7-208ENST00000496441 TAF7LQ5H9L4 462 aa13.73□□□□□ -0.21
CDCA7-208ENST00000496441 BRF1Q92994 677 aa13.73□□□□□ -0.21
CDCA7-208ENST00000496441 SH2B1Q9NRF2 756 aaPredicted RBP13.73□□□□□ -0.21
CDCA7-208ENST00000496441 TMOD3Q9NYL9 352 aa13.73□□□□□ -0.21
CDCA7-208ENST00000496441 ZNF609O15014 1411 aa13.73□□□□□ -0.21
CDCA7-208ENST00000496441 RABL6Q3YEC7 729 aaPredicted RBP13.73□□□□□ -0.21
CDCA7-208ENST00000496441 ATG9AQ7Z3C6 839 aa13.73□□□□□ -0.21
CDCA7-208ENST00000496441 DNAJC10Q8IXB1 793 aa13.73□□□□□ -0.21
CDCA7-208ENST00000496441 NEK1Q96PY6 1258 aa13.73□□□□□ -0.21
CDCA7-208ENST00000496441 TM6SF1Q9BZW5 370 aa13.73□□□□□ -0.21
CDCA7-208ENST00000496441 PAG1Q9NWQ8 432 aa13.73□□□□□ -0.21
CDCA7-208ENST00000496441 USP25Q9UHP3 1055 aa13.73□□□□□ -0.21
CDCA7-208ENST00000496441 CAMTA1Q9Y6Y1 1673 aa13.72□□□□□ -0.21
CDCA7-208ENST00000496441 A0A1B0GUL7 405 aa13.72□□□□□ -0.21
CDCA7-208ENST00000496441 CCT2P78371 535 aaKnown RBP13.72□□□□□ -0.21
CDCA7-208ENST00000496441 MCMDC2Q4G0Z9 681 aa13.72□□□□□ -0.21
CDCA7-208ENST00000496441 PI16Q6UXB8 463 aa13.72□□□□□ -0.21
CDCA7-208ENST00000496441 ZSCAN30Q86W11 494 aa13.72□□□□□ -0.21
CDCA7-208ENST00000496441 ZNF830Q96NB3 372 aaPredicted RBP13.72□□□□□ -0.21
CDCA7-208ENST00000496441 ATP6V1DQ9Y5K8 247 aa13.72□□□□□ -0.21
CDCA7-208ENST00000496441 IFIT1P09914 478 aaKnown RBP13.72□□□□□ -0.21
CDCA7-208ENST00000496441 HAND2P61296 217 aa13.72□□□□□ -0.21
CDCA7-208ENST00000496441 MED23Q9ULK4 1368 aa13.71□□□□□ -0.21
CDCA7-208ENST00000496441 H7C1W4 665 aa13.71□□□□□ -0.21
CDCA7-208ENST00000496441 CCDC57Q2TAC2 916 aa13.71□□□□□ -0.21
CDCA7-208ENST00000496441 TTLL5Q6EMB2 1281 aa13.71□□□□□ -0.21
CDCA7-208ENST00000496441 RAB11FIP4Q86YS3 637 aa13.71□□□□□ -0.21
CDCA7-208ENST00000496441 COL18A1P39060 1754 aa13.71□□□□□ -0.21
CDCA7-208ENST00000496441 ADORA1P30542 326 aa13.71□□□□□ -0.21
CDCA7-208ENST00000496441 UBE2HP62256 183 aa13.71□□□□□ -0.21
CDCA7-208ENST00000496441 WASHC4Q2M389 1173 aa13.71□□□□□ -0.21
CDCA7-208ENST00000496441 HAUS7Q99871 368 aa13.71□□□□□ -0.21
CDCA7-208ENST00000496441 BTG4Q9NY30 223 aa13.71□□□□□ -0.21
CDCA7-208ENST00000496441 GUCY1B3Q02153 619 aa13.7□□□□□ -0.22
CDCA7-208ENST00000496441 NCOA5Q9HCD5 579 aaKnown RBP13.7□□□□□ -0.22
CDCA7-208ENST00000496441 GOLGA6L4A6NEF3 574 aa13.7□□□□□ -0.22
CDCA7-208ENST00000496441 PHF14O94880 888 aa13.7□□□□□ -0.22
CDCA7-208ENST00000496441 APOBRQ0VD83 1088 aa13.7□□□□□ -0.22
CDCA7-208ENST00000496441 CCDC183Q5T5S1 534 aa13.7□□□□□ -0.22
CDCA7-208ENST00000496441 STOX1Q6ZVD7 989 aa13.7□□□□□ -0.22
CDCA7-208ENST00000496441 TTC6Q86TZ1 520 aa13.7□□□□□ -0.22
CDCA7-208ENST00000496441 CKAP2LQ8IYA6 745 aa13.7□□□□□ -0.22
CDCA7-208ENST00000496441 KBTBD3Q8NAB2 608 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms