RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 RIC1Q4ADV7 1423 aa15.07■□□□□ 0
BRD3-206ENST00000494743 POLRMTO00411 1230 aaKnown RBP15.06■□□□□ 0
BRD3-206ENST00000494743 MSH5O43196 834 aa15.06■□□□□ 0
BRD3-206ENST00000494743 PDE8AO60658 829 aa15.06■□□□□ 0
BRD3-206ENST00000494743 RFX5P48382 616 aaPredicted RBP15.06■□□□□ 0
BRD3-206ENST00000494743 CTSWP56202 376 aa15.06■□□□□ 0
BRD3-206ENST00000494743 ERFEQ4G0M1 354 aa15.06■□□□□ 0
BRD3-206ENST00000494743 SLC10A5Q5PT55 438 aa15.06■□□□□ 0
BRD3-206ENST00000494743 NBPF5PQ86XG9 351 aaPredicted RBP15.06■□□□□ 0
BRD3-206ENST00000494743 LAMB2P55268 1798 aa15.06■□□□□ 0
BRD3-206ENST00000494743 HCLS1P14317 486 aaPredicted RBP15.05■□□□□ -0
BRD3-206ENST00000494743 TPTE2Q6XPS3 522 aa15.05■□□□□ -0
BRD3-206ENST00000494743 TTLL11Q8NHH1 800 aa15.05■□□□□ -0
BRD3-206ENST00000494743 NOP58Q9Y2X3 529 aaKnown RBP15.05■□□□□ -0
BRD3-206ENST00000494743 DDX60Q8IY21 1712 aaKnown RBP15.05■□□□□ -0
BRD3-206ENST00000494743 HSP90B1P14625 803 aaKnown RBP15.04■□□□□ -0
BRD3-206ENST00000494743 KLHL34Q8N239 644 aa15.04■□□□□ -0
BRD3-206ENST00000494743 GOLGB1Q14789 3259 aaKnown RBP15.04■□□□□ -0
BRD3-206ENST00000494743 RTL9Q8NET4 1388 aa15.03■□□□□ -0
BRD3-206ENST00000494743 CAPN15O75808 1086 aa15.03■□□□□ -0
BRD3-206ENST00000494743 SERPINB2P05120 415 aa15.03■□□□□ -0
BRD3-206ENST00000494743 NUCB1Q02818 461 aa15.03■□□□□ -0
BRD3-206ENST00000494743 PTPN12Q05209 780 aaKnown RBP15.03■□□□□ -0
BRD3-206ENST00000494743 FAM161AQ3B820 660 aa15.03■□□□□ -0
BRD3-206ENST00000494743 PRR5LQ6MZQ0 368 aa15.03■□□□□ -0
BRD3-206ENST00000494743 CNBD1Q8NA66 436 aa15.03■□□□□ -0
BRD3-206ENST00000494743 COPRSQ9NQ92 184 aa15.03■□□□□ -0
BRD3-206ENST00000494743 MMP10P09238 476 aa15.02■□□□□ -0
BRD3-206ENST00000494743 MSL1Q68DK7 614 aa15.02■□□□□ -0
BRD3-206ENST00000494743 C3orf67Q6ZVT6 689 aa15.02■□□□□ -0
BRD3-206ENST00000494743 GREM2Q9H772 168 aa15.02■□□□□ -0
BRD3-206ENST00000494743 PA2G4Q9UQ80 394 aaKnown RBP15.02■□□□□ -0
BRD3-206ENST00000494743 EXOC6BQ9Y2D4 811 aa15.02■□□□□ -0
BRD3-206ENST00000494743 NRXN2Q9P2S2 1712 aa15.02□□□□□ -0.01
BRD3-206ENST00000494743 SF3B3Q15393 1217 aaKnown RBP15.01□□□□□ -0.01
BRD3-206ENST00000494743 KLHDC4Q8TBB5 520 aa15.01□□□□□ -0.01
BRD3-206ENST00000494743 SLC16A10Q8TF71 515 aa15.01□□□□□ -0.01
BRD3-206ENST00000494743 GPBP1L1Q9HC44 474 aaPredicted RBP15.01□□□□□ -0.01
BRD3-206ENST00000494743 PDZRN3Q9UPQ7 1066 aa15.01□□□□□ -0.01
BRD3-206ENST00000494743 CHMP3Q9Y3E7 222 aa15.01□□□□□ -0.01
BRD3-206ENST00000494743 TNRC6CQ9HCJ0 1690 aaKnown RBP15□□□□□ -0.01
BRD3-206ENST00000494743 SURF6O75683 361 aaKnown RBP15□□□□□ -0.01
BRD3-206ENST00000494743 GTF2E1P29083 439 aaPredicted RBP15□□□□□ -0.01
BRD3-206ENST00000494743 CCDC24Q8N4L8 307 aa15□□□□□ -0.01
BRD3-206ENST00000494743 CCDC85AQ96PX6 553 aaPredicted RBP15□□□□□ -0.01
BRD3-206ENST00000494743 RAB11FIP3O75154 756 aa14.99□□□□□ -0.01
BRD3-206ENST00000494743 ITGA6P23229 1130 aa14.99□□□□□ -0.01
BRD3-206ENST00000494743 ST5P78524 1137 aa14.99□□□□□ -0.01
BRD3-206ENST00000494743 IFIT5Q13325 482 aaKnown RBP14.99□□□□□ -0.01
BRD3-206ENST00000494743 CCDC57Q2TAC2 916 aa14.99□□□□□ -0.01
BRD3-206ENST00000494743 CCDC152Q4G0S7 254 aa14.99□□□□□ -0.01
BRD3-206ENST00000494743 HSP90AB4PQ58FF6 505 aa14.99□□□□□ -0.01
BRD3-206ENST00000494743 CHD1LQ86WJ1 897 aa14.99□□□□□ -0.01
BRD3-206ENST00000494743 SKAP1Q86WV1 359 aa14.99□□□□□ -0.01
BRD3-206ENST00000494743 ANKRD18BA2A2Z9 1011 aa14.98□□□□□ -0.01
BRD3-206ENST00000494743 KLRG2A4D1S0 409 aaPredicted RBP14.98□□□□□ -0.01
BRD3-206ENST00000494743 ANKRD45Q5TZF3 282 aa14.98□□□□□ -0.01
BRD3-206ENST00000494743 NLRP3Q96P20 1036 aa14.98□□□□□ -0.01
BRD3-206ENST00000494743 FBXO3Q9UK99 471 aa14.98□□□□□ -0.01
BRD3-206ENST00000494743 PARP3Q9Y6F1 533 aa14.98□□□□□ -0.01
BRD3-206ENST00000494743 COL4A1P02462 1669 aa14.97□□□□□ -0.01
BRD3-206ENST00000494743 NPHP1O15259 732 aa14.97□□□□□ -0.01
BRD3-206ENST00000494743 GRIN3BO60391 1043 aa14.97□□□□□ -0.01
BRD3-206ENST00000494743 CIAO1O76071 339 aa14.97□□□□□ -0.01
BRD3-206ENST00000494743 SASH1O94885 1247 aa14.97□□□□□ -0.01
BRD3-206ENST00000494743 PDE4AP27815 886 aa14.97□□□□□ -0.01
BRD3-206ENST00000494743 CRY2Q49AN0 593 aa14.97□□□□□ -0.01
BRD3-206ENST00000494743 ATG9AQ7Z3C6 839 aa14.97□□□□□ -0.01
BRD3-206ENST00000494743 NLGN2Q8NFZ4 835 aa14.97□□□□□ -0.01
BRD3-206ENST00000494743 RHPN1Q8TCX5 695 aa14.97□□□□□ -0.01
BRD3-206ENST00000494743 KIF1BPQ96EK5 621 aa14.97□□□□□ -0.01
BRD3-206ENST00000494743 ZNF594Q96JF6 807 aaPredicted RBP14.97□□□□□ -0.01
BRD3-206ENST00000494743 LRRCC1Q9C099 1032 aa14.97□□□□□ -0.01
BRD3-206ENST00000494743 LNPKQ9C0E8 428 aa14.97□□□□□ -0.01
BRD3-206ENST00000494743 SIL1Q9H173 461 aa14.97□□□□□ -0.01
BRD3-206ENST00000494743 MYH3P11055 1940 aa14.96□□□□□ -0.01
BRD3-206ENST00000494743 EYA2O00167 538 aa14.96□□□□□ -0.01
BRD3-206ENST00000494743 APBB1O00213 710 aa14.96□□□□□ -0.01
BRD3-206ENST00000494743 SMARCA5O60264 1052 aaPredicted RBP14.96□□□□□ -0.01
BRD3-206ENST00000494743 YBX3P16989 372 aaKnown RBP eCLIP14.96□□□□□ -0.01
BRD3-206ENST00000494743 G3BP1Q13283 466 aaKnown RBP eCLIP14.96□□□□□ -0.01
BRD3-206ENST00000494743 ERC1Q8IUD2 1116 aa14.96□□□□□ -0.01
BRD3-206ENST00000494743 BRIP1Q9BX63 1249 aa14.96□□□□□ -0.01
BRD3-206ENST00000494743 SEC31BQ9NQW1 1179 aa14.96□□□□□ -0.01
BRD3-206ENST00000494743 IL15P40933 162 aaPredicted RBP14.95□□□□□ -0.02
BRD3-206ENST00000494743 LRRC24Q50LG9 513 aa14.95□□□□□ -0.02
BRD3-206ENST00000494743 PUS3Q9BZE2 481 aaKnown RBP14.95□□□□□ -0.02
BRD3-206ENST00000494743 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.95□□□□□ -0.02
BRD3-206ENST00000494743 SALL3Q9BXA9 1300 aa14.94□□□□□ -0.02
BRD3-206ENST00000494743 C10orf71Q711Q0 1435 aa14.94□□□□□ -0.02
BRD3-206ENST00000494743 POLD1P28340 1107 aa14.94□□□□□ -0.02
BRD3-206ENST00000494743 OS9Q13438 667 aaPredicted RBP14.94□□□□□ -0.02
BRD3-206ENST00000494743 TAF7LQ5H9L4 462 aa14.94□□□□□ -0.02
BRD3-206ENST00000494743 COL13A1Q5TAT6 717 aaPredicted RBP14.94□□□□□ -0.02
BRD3-206ENST00000494743 ZNF526Q8TF50 670 aaPredicted RBP14.94□□□□□ -0.02
BRD3-206ENST00000494743 RIPOR2Q9Y4F9 1068 aa14.94□□□□□ -0.02
BRD3-206ENST00000494743 CDC5LQ99459 802 aaKnown RBP14.93□□□□□ -0.02
BRD3-206ENST00000494743 IL1RAPL2Q9NP60 686 aa14.93□□□□□ -0.02
BRD3-206ENST00000494743 HOXA10P31260 410 aaPredicted RBP14.92□□□□□ -0.02
BRD3-206ENST00000494743 APLP1P51693 650 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms