RNA–Protein interactions for RNA: ENST00000494580.1

CTNNA3-204, Transcript of catenin alpha 3, humanhuman

TSL 3

Gene CTNNA3, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-204ENST00000494580 SLC52A2Q9HAB3 445 aa6.7□□□□□ -1.34
CTNNA3-204ENST00000494580 MRS2Q9HD23 443 aa6.7□□□□□ -1.34
CTNNA3-204ENST00000494580 TMOD3Q9NYL9 352 aa6.7□□□□□ -1.34
CTNNA3-204ENST00000494580 CCNL1Q9UK58 526 aaPredicted RBP6.7□□□□□ -1.34
CTNNA3-204ENST00000494580 PNPLA7Q6ZV29 1317 aa6.7□□□□□ -1.34
CTNNA3-204ENST00000494580 SCN7AQ01118 1682 aa6.69□□□□□ -1.34
CTNNA3-204ENST00000494580 LOC102724428A0A0B4J2F2 783 aa6.69□□□□□ -1.34
CTNNA3-204ENST00000494580 GNAT3A8MTJ3 354 aa6.69□□□□□ -1.34
CTNNA3-204ENST00000494580 ANP32CO43423 234 aa6.69□□□□□ -1.34
CTNNA3-204ENST00000494580 KDM4AO75164 1064 aa6.69□□□□□ -1.34
CTNNA3-204ENST00000494580 SIK1P57059 783 aa6.69□□□□□ -1.34
CTNNA3-204ENST00000494580 KRT24Q2M2I5 525 aa6.69□□□□□ -1.34
CTNNA3-204ENST00000494580 NUTM1Q86Y26 1132 aa6.69□□□□□ -1.34
CTNNA3-204ENST00000494580 CCDC125Q86Z20 511 aa6.69□□□□□ -1.34
CTNNA3-204ENST00000494580 GAS2L2Q8NHY3 880 aa6.69□□□□□ -1.34
CTNNA3-204ENST00000494580 MIS18AQ9NYP9 233 aa6.69□□□□□ -1.34
CTNNA3-204ENST00000494580 NUDCQ9Y266 331 aa6.69□□□□□ -1.34
CTNNA3-204ENST00000494580 PCDHB3Q9Y5E6 796 aa6.69□□□□□ -1.34
CTNNA3-204ENST00000494580 BCORQ6W2J9 1755 aa6.68□□□□□ -1.34
CTNNA3-204ENST00000494580 ERVV-2B6SEH9 535 aa6.68□□□□□ -1.34
CTNNA3-204ENST00000494580 APAF1O14727 1248 aa6.68□□□□□ -1.34
CTNNA3-204ENST00000494580 PTCD1O75127 700 aaKnown RBP6.68□□□□□ -1.34
CTNNA3-204ENST00000494580 ATP6V1AP38606 617 aa6.68□□□□□ -1.34
CTNNA3-204ENST00000494580 TMPOP42166 694 aaKnown RBP6.68□□□□□ -1.34
CTNNA3-204ENST00000494580 PIP4K2AP48426 406 aaPredicted RBP6.68□□□□□ -1.34
CTNNA3-204ENST00000494580 BRPF1P55201 1214 aaPredicted RBP6.68□□□□□ -1.34
CTNNA3-204ENST00000494580 CABP4P57796 275 aa6.68□□□□□ -1.34
CTNNA3-204ENST00000494580 COPS2P61201 443 aa6.68□□□□□ -1.34
CTNNA3-204ENST00000494580 FUT2Q10981 343 aa6.68□□□□□ -1.34
CTNNA3-204ENST00000494580 PUS10Q3MIT2 529 aaKnown RBP6.68□□□□□ -1.34
CTNNA3-204ENST00000494580 DNAJC10Q8IXB1 793 aa6.68□□□□□ -1.34
CTNNA3-204ENST00000494580 ZNF496Q96IT1 587 aaPredicted RBP6.68□□□□□ -1.34
CTNNA3-204ENST00000494580 HSP90AB1P08238 724 aaKnown RBP6.67□□□□□ -1.34
CTNNA3-204ENST00000494580 WDR43Q15061 677 aaKnown RBP eCLIP6.67□□□□□ -1.34
CTNNA3-204ENST00000494580 GRIPAP1Q4V328 841 aa6.67□□□□□ -1.34
CTNNA3-204ENST00000494580 TJAP1Q5JTD0 557 aa6.67□□□□□ -1.34
CTNNA3-204ENST00000494580 MAPK8IP3Q9UPT6 1336 aa6.67□□□□□ -1.34
CTNNA3-204ENST00000494580 ZBTB7AO95365 584 aa6.66□□□□□ -1.34
CTNNA3-204ENST00000494580 SLC15A2Q16348 729 aa6.66□□□□□ -1.34
CTNNA3-204ENST00000494580 DIEXFQ68CQ4 756 aaKnown RBP6.66□□□□□ -1.34
CTNNA3-204ENST00000494580 MSL1Q68DK7 614 aa6.66□□□□□ -1.34
CTNNA3-204ENST00000494580 BLOC1S3Q6QNY0 202 aa6.66□□□□□ -1.34
CTNNA3-204ENST00000494580 SPIRE2Q8WWL2 714 aa6.66□□□□□ -1.34
CTNNA3-204ENST00000494580 RUNDC1Q96C34 613 aa6.66□□□□□ -1.34
CTNNA3-204ENST00000494580 MTRQ99707 1265 aa6.66□□□□□ -1.34
CTNNA3-204ENST00000494580 IL21Q9HBE4 155 aa6.66□□□□□ -1.34
CTNNA3-204ENST00000494580 ZBTB1Q9Y2K1 713 aa6.66□□□□□ -1.34
CTNNA3-204ENST00000494580 KIAA1551Q9HCM1 1747 aa6.66□□□□□ -1.34
CTNNA3-204ENST00000494580 HEG1Q9ULI3 1381 aa6.66□□□□□ -1.34
CTNNA3-204ENST00000494580 RIPK4P57078 832 aa6.65□□□□□ -1.34
CTNNA3-204ENST00000494580 USP46P62068 366 aa6.65□□□□□ -1.34
CTNNA3-204ENST00000494580 KCNC4Q03721 635 aa6.65□□□□□ -1.34
CTNNA3-204ENST00000494580 SLC27A3Q5K4L6 730 aa6.65□□□□□ -1.34
CTNNA3-204ENST00000494580 MORN1Q5T089 497 aa6.65□□□□□ -1.34
CTNNA3-204ENST00000494580 INTS5Q6P9B9 1019 aaKnown RBP6.65□□□□□ -1.34
CTNNA3-204ENST00000494580 ZNF790Q6PG37 636 aa6.65□□□□□ -1.34
CTNNA3-204ENST00000494580 COL23A1Q86Y22 540 aaPredicted RBP6.65□□□□□ -1.34
CTNNA3-204ENST00000494580 SCUBE3Q8IX30 993 aa6.65□□□□□ -1.34
CTNNA3-204ENST00000494580 FAM9BQ8IZU0 186 aa6.65□□□□□ -1.34
CTNNA3-204ENST00000494580 ZNF516Q92618 1163 aa6.65□□□□□ -1.34
CTNNA3-204ENST00000494580 TBC1D2Q9BYX2 928 aa6.65□□□□□ -1.34
CTNNA3-204ENST00000494580 FAM117AQ9C073 453 aa6.65□□□□□ -1.34
CTNNA3-204ENST00000494580 SRP68Q9UHB9 627 aaKnown RBP6.65□□□□□ -1.34
CTNNA3-204ENST00000494580 SALL2Q9Y467 1007 aaPredicted RBP6.65□□□□□ -1.34
CTNNA3-204ENST00000494580 BTBD11A6QL63 1104 aa6.64□□□□□ -1.35
CTNNA3-204ENST00000494580 NR1I2O75469 434 aa6.64□□□□□ -1.35
CTNNA3-204ENST00000494580 CRKLP46109 303 aaKnown RBP6.64□□□□□ -1.35
CTNNA3-204ENST00000494580 TEFQ10587 303 aa6.64□□□□□ -1.35
CTNNA3-204ENST00000494580 IL27Q8NEV9 243 aa6.64□□□□□ -1.35
CTNNA3-204ENST00000494580 STK32BQ9NY57 414 aa6.64□□□□□ -1.35
CTNNA3-204ENST00000494580 SOS1Q07889 1333 aaPredicted RBP6.64□□□□□ -1.35
CTNNA3-204ENST00000494580 CNTNAP4Q9C0A0 1308 aa6.64□□□□□ -1.35
CTNNA3-204ENST00000494580 ZPR1O75312 459 aa6.63□□□□□ -1.35
CTNNA3-204ENST00000494580 ANXA1P04083 346 aa6.63□□□□□ -1.35
CTNNA3-204ENST00000494580 CYP19A1P11511 503 aaPredicted RBP6.63□□□□□ -1.35
CTNNA3-204ENST00000494580 COL11A2P13942 1736 aaPredicted RBP6.63□□□□□ -1.35
CTNNA3-204ENST00000494580 NDUFV2P19404 249 aa6.63□□□□□ -1.35
CTNNA3-204ENST00000494580 DIXDC1Q155Q3 683 aa6.63□□□□□ -1.35
CTNNA3-204ENST00000494580 PROSER3Q2NL68 480 aa6.63□□□□□ -1.35
CTNNA3-204ENST00000494580 NBPF14Q5TI25 921 aa6.63□□□□□ -1.35
CTNNA3-204ENST00000494580 NBPF10Q6P3W6 841 aaKnown RBP6.63□□□□□ -1.35
CTNNA3-204ENST00000494580 NBPF15Q8N660 670 aa6.63□□□□□ -1.35
CTNNA3-204ENST00000494580 CARMIL3Q8ND23 1372 aa6.63□□□□□ -1.35
CTNNA3-204ENST00000494580 SMARCC1Q92922 1105 aaPredicted RBP6.63□□□□□ -1.35
CTNNA3-204ENST00000494580 TSR2Q969E8 191 aaKnown RBP6.63□□□□□ -1.35
CTNNA3-204ENST00000494580 DDRGK1Q96HY6 314 aa6.63□□□□□ -1.35
CTNNA3-204ENST00000494580 ZNF521Q96K83 1311 aa6.63□□□□□ -1.35
CTNNA3-204ENST00000494580 TNRC6CQ9HCJ0 1690 aaKnown RBP6.63□□□□□ -1.35
CTNNA3-204ENST00000494580 SLC27A5Q9Y2P5 690 aa6.63□□□□□ -1.35
CTNNA3-204ENST00000494580 AFDNP55196 1824 aaKnown RBP6.62□□□□□ -1.35
CTNNA3-204ENST00000494580 COL15A1P39059 1388 aa6.62□□□□□ -1.35
CTNNA3-204ENST00000494580 HOXA2O43364 376 aa6.62□□□□□ -1.35
CTNNA3-204ENST00000494580 ITGBL1O95965 494 aaPredicted RBP6.62□□□□□ -1.35
CTNNA3-204ENST00000494580 A1BGP04217 495 aa6.62□□□□□ -1.35
CTNNA3-204ENST00000494580 ZNF853P0CG23 659 aa6.62□□□□□ -1.35
CTNNA3-204ENST00000494580 EIF4A1P60842 406 aaKnown RBP6.62□□□□□ -1.35
CTNNA3-204ENST00000494580 LRP10Q7Z4F1 713 aa6.62□□□□□ -1.35
CTNNA3-204ENST00000494580 RTF1Q92541 710 aaKnown RBP6.62□□□□□ -1.35
CTNNA3-204ENST00000494580 HLA-CQ95604 372 aa6.62□□□□□ -1.35
CTNNA3-204ENST00000494580 MBIPQ9NS73 344 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms