RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-204ENST00000494467 LMBR1LQ6UX01 489 aa11.5□□□□□ -0.57
ABCA1-204ENST00000494467 SYNE4Q8N205 404 aa11.5□□□□□ -0.57
ABCA1-204ENST00000494467 ABCC12Q96J65 1359 aa11.5□□□□□ -0.57
ABCA1-204ENST00000494467 CIAO1O76071 339 aa11.49□□□□□ -0.57
ABCA1-204ENST00000494467 PTPN12Q05209 780 aaKnown RBP11.49□□□□□ -0.57
ABCA1-204ENST00000494467 CNBD1Q8NA66 436 aa11.49□□□□□ -0.57
ABCA1-204ENST00000494467 BRIP1Q9BX63 1249 aa11.49□□□□□ -0.57
ABCA1-204ENST00000494467 PDZRN3Q9UPQ7 1066 aa11.49□□□□□ -0.57
ABCA1-204ENST00000494467 LRRC37AA6NMS7 1700 aa11.49□□□□□ -0.57
ABCA1-204ENST00000494467 KIAA1551Q9HCM1 1747 aa11.49□□□□□ -0.57
ABCA1-204ENST00000494467 SPEF2Q9C093 1822 aa11.49□□□□□ -0.57
ABCA1-204ENST00000494467 TAF1P21675 1872 aa11.49□□□□□ -0.57
ABCA1-204ENST00000494467 MMP10P09238 476 aa11.48□□□□□ -0.57
ABCA1-204ENST00000494467 HOXA10P31260 410 aaPredicted RBP11.48□□□□□ -0.57
ABCA1-204ENST00000494467 NUCB1Q02818 461 aa11.48□□□□□ -0.57
ABCA1-204ENST00000494467 CCDC152Q4G0S7 254 aa11.48□□□□□ -0.57
ABCA1-204ENST00000494467 NLRP3Q96P20 1036 aa11.48□□□□□ -0.57
ABCA1-204ENST00000494467 COL11A2P13942 1736 aaPredicted RBP11.48□□□□□ -0.57
ABCA1-204ENST00000494467 BRCA1P38398 1863 aaKnown RBP11.47□□□□□ -0.57
ABCA1-204ENST00000494467 ARAP2Q8WZ64 1704 aa11.47□□□□□ -0.57
ABCA1-204ENST00000494467 C10orf71Q711Q0 1435 aa11.47□□□□□ -0.57
ABCA1-204ENST00000494467 ST5P78524 1137 aa11.47□□□□□ -0.57
ABCA1-204ENST00000494467 BICDL1Q6ZP65 573 aa11.47□□□□□ -0.57
ABCA1-204ENST00000494467 NUTM1Q86Y26 1132 aa11.47□□□□□ -0.57
ABCA1-204ENST00000494467 ERC1Q8IUD2 1116 aa11.47□□□□□ -0.57
ABCA1-204ENST00000494467 JARID2Q92833 1246 aaPredicted RBP11.47□□□□□ -0.57
ABCA1-204ENST00000494467 SGIP1Q9BQI5 828 aa11.47□□□□□ -0.57
ABCA1-204ENST00000494467 MTFR1LQ9H019 292 aa11.47□□□□□ -0.57
ABCA1-204ENST00000494467 PARP3Q9Y6F1 533 aa11.47□□□□□ -0.57
ABCA1-204ENST00000494467 HCLS1P14317 486 aaPredicted RBP11.46□□□□□ -0.57
ABCA1-204ENST00000494467 IFIT5Q13325 482 aaKnown RBP11.46□□□□□ -0.57
ABCA1-204ENST00000494467 CCDC57Q2TAC2 916 aa11.46□□□□□ -0.57
ABCA1-204ENST00000494467 GREM2Q9H772 168 aa11.46□□□□□ -0.57
ABCA1-204ENST00000494467 GPR108Q9NPR9 543 aa11.46□□□□□ -0.57
ABCA1-204ENST00000494467 ANKRD18BA2A2Z9 1011 aa11.45□□□□□ -0.58
ABCA1-204ENST00000494467 EYA2O00167 538 aa11.45□□□□□ -0.58
ABCA1-204ENST00000494467 ZBTB22O15209 634 aa11.45□□□□□ -0.58
ABCA1-204ENST00000494467 MSH5O43196 834 aa11.45□□□□□ -0.58
ABCA1-204ENST00000494467 ITGA6P23229 1130 aa11.45□□□□□ -0.58
ABCA1-204ENST00000494467 GTF2E1P29083 439 aaPredicted RBP11.45□□□□□ -0.58
ABCA1-204ENST00000494467 FAM161AQ3B820 660 aa11.45□□□□□ -0.58
ABCA1-204ENST00000494467 RTL5Q5HYW3 569 aaPredicted RBP11.45□□□□□ -0.58
ABCA1-204ENST00000494467 ATG9AQ7Z3C6 839 aa11.45□□□□□ -0.58
ABCA1-204ENST00000494467 KIF1BPQ96EK5 621 aa11.45□□□□□ -0.58
ABCA1-204ENST00000494467 CRAMP1Q96RY5 1269 aa11.45□□□□□ -0.58
ABCA1-204ENST00000494467 PDGFDQ9GZP0 370 aaPredicted RBP11.45□□□□□ -0.58
ABCA1-204ENST00000494467 RIPOR2Q9Y4F9 1068 aa11.45□□□□□ -0.58
ABCA1-204ENST00000494467 LTBP1Q14766 1721 aa11.45□□□□□ -0.58
ABCA1-204ENST00000494467 SALL3Q9BXA9 1300 aa11.44□□□□□ -0.58
ABCA1-204ENST00000494467 COL4A1P02462 1669 aa11.44□□□□□ -0.58
ABCA1-204ENST00000494467 SURF6O75683 361 aaKnown RBP11.44□□□□□ -0.58
ABCA1-204ENST00000494467 SASH1O94885 1247 aa11.44□□□□□ -0.58
ABCA1-204ENST00000494467 PDE6BP35913 854 aa11.44□□□□□ -0.58
ABCA1-204ENST00000494467 IL15P40933 162 aaPredicted RBP11.44□□□□□ -0.58
ABCA1-204ENST00000494467 C3orf67Q6ZVT6 689 aa11.44□□□□□ -0.58
ABCA1-204ENST00000494467 TMC4Q7Z404 712 aa11.44□□□□□ -0.58
ABCA1-204ENST00000494467 CHD1LQ86WJ1 897 aa11.44□□□□□ -0.58
ABCA1-204ENST00000494467 CDC5LQ99459 802 aaKnown RBP11.44□□□□□ -0.58
ABCA1-204ENST00000494467 LRRCC1Q9C099 1032 aa11.44□□□□□ -0.58
ABCA1-204ENST00000494467 SRGNP10124 158 aa11.43□□□□□ -0.58
ABCA1-204ENST00000494467 G3BP1Q13283 466 aaKnown RBP eCLIP11.43□□□□□ -0.58
ABCA1-204ENST00000494467 RHPN1Q8TCX5 695 aa11.43□□□□□ -0.58
ABCA1-204ENST00000494467 BSDC1Q9NW68 430 aaPredicted RBP11.43□□□□□ -0.58
ABCA1-204ENST00000494467 EXOC6BQ9Y2D4 811 aa11.43□□□□□ -0.58
ABCA1-204ENST00000494467 MROH5Q6ZUA9 1318 aa11.42□□□□□ -0.58
ABCA1-204ENST00000494467 FAM177BA6PVY3 158 aa11.42□□□□□ -0.58
ABCA1-204ENST00000494467 R3HDM1Q15032 1099 aaKnown RBP11.42□□□□□ -0.58
ABCA1-204ENST00000494467 VGLL2Q8N8G2 317 aa11.42□□□□□ -0.58
ABCA1-204ENST00000494467 OSBPL3Q9H4L5 887 aa11.42□□□□□ -0.58
ABCA1-204ENST00000494467 STAP2Q9UGK3 403 aa11.42□□□□□ -0.58
ABCA1-204ENST00000494467 PA2G4Q9UQ80 394 aaKnown RBP11.42□□□□□ -0.58
ABCA1-204ENST00000494467 AOX1Q06278 1338 aa11.41□□□□□ -0.58
ABCA1-204ENST00000494467 BBOX1O75936 387 aa11.41□□□□□ -0.58
ABCA1-204ENST00000494467 NPR1P16066 1061 aa11.41□□□□□ -0.58
ABCA1-204ENST00000494467 RPS8P62241 208 aaKnown RBP11.41□□□□□ -0.58
ABCA1-204ENST00000494467 GRAPQ13588 217 aa11.41□□□□□ -0.58
ABCA1-204ENST00000494467 ANKRD45Q5TZF3 282 aa11.41□□□□□ -0.58
ABCA1-204ENST00000494467 MSL1Q68DK7 614 aa11.41□□□□□ -0.58
ABCA1-204ENST00000494467 STYK1Q6J9G0 422 aa11.41□□□□□ -0.58
ABCA1-204ENST00000494467 LDHAL6AQ6ZMR3 332 aa11.41□□□□□ -0.58
ABCA1-204ENST00000494467 DDX46Q7L014 1031 aaKnown RBP11.41□□□□□ -0.58
ABCA1-204ENST00000494467 GRAPLQ8TC17 118 aaPredicted RBP11.41□□□□□ -0.58
ABCA1-204ENST00000494467 CACNA1SQ13698 1873 aa11.4□□□□□ -0.58
ABCA1-204ENST00000494467 SLX4Q8IY92 1834 aa11.4□□□□□ -0.58
ABCA1-204ENST00000494467 IGHMBP2P38935 993 aaKnown RBP11.4□□□□□ -0.58
ABCA1-204ENST00000494467 PTGER2P43116 358 aa11.4□□□□□ -0.58
ABCA1-204ENST00000494467 ANKRD18AQ8IVF6 992 aa11.4□□□□□ -0.58
ABCA1-204ENST00000494467 KLHDC4Q8TBB5 520 aa11.4□□□□□ -0.58
ABCA1-204ENST00000494467 MASTLQ96GX5 879 aa11.4□□□□□ -0.58
ABCA1-204ENST00000494467 RBM17Q96I25 401 aaKnown RBP11.4□□□□□ -0.58
ABCA1-204ENST00000494467 SEC31BQ9NQW1 1179 aa11.4□□□□□ -0.58
ABCA1-204ENST00000494467 CHMP3Q9Y3E7 222 aa11.4□□□□□ -0.58
ABCA1-204ENST00000494467 ZNF609O15014 1411 aa11.4□□□□□ -0.58
ABCA1-204ENST00000494467 AKAP11Q9UKA4 1901 aa11.4□□□□□ -0.58
ABCA1-204ENST00000494467 ARFGEF1Q9Y6D6 1849 aa11.39□□□□□ -0.59
ABCA1-204ENST00000494467 AK9Q5TCS8 1911 aa11.39□□□□□ -0.59
ABCA1-204ENST00000494467 NPHP1O15259 732 aa11.39□□□□□ -0.59
ABCA1-204ENST00000494467 PDE8BO95263 885 aa11.39□□□□□ -0.59
ABCA1-204ENST00000494467 FGFR2P21802 821 aa11.39□□□□□ -0.59
ABCA1-204ENST00000494467 PDE4AP27815 886 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms