RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 GAS6Q14393 721 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 ELOA3BQ3SY89 546 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 ZNF438Q7Z4V0 828 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 NLRP13Q86W25 1043 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 CACTIN-AS1Q8N1I8 211 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 BEND7Q8N7W2 519 aaPredicted RBP4.22□□□□□ -1.73
LMNB1-207ENST00000494185 GALNT6Q8NCL4 622 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 ELOA3Q8NG57 546 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 EDARADDQ8WWZ3 215 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 TNFRSF25Q93038 417 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 GGA1Q9UJY5 639 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 BCS1LQ9Y276 419 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 RTCBQ9Y3I0 505 aaKnown RBP4.22□□□□□ -1.73
LMNB1-207ENST00000494185 NEURL1BA8MQ27 555 aa4.21□□□□□ -1.74
LMNB1-207ENST00000494185 NPR3P17342 541 aa4.21□□□□□ -1.74
LMNB1-207ENST00000494185 NFKB1P19838 968 aa4.21□□□□□ -1.74
LMNB1-207ENST00000494185 ADH7P40394 386 aa4.21□□□□□ -1.74
LMNB1-207ENST00000494185 HNRNPUQ00839 825 aaKnown RBP eCLIP4.21□□□□□ -1.74
LMNB1-207ENST00000494185 DNM1Q05193 864 aaKnown RBP4.21□□□□□ -1.74
LMNB1-207ENST00000494185 UBAP2LQ14157 1087 aaKnown RBP4.21□□□□□ -1.74
LMNB1-207ENST00000494185 RNFT1Q5M7Z0 435 aa4.21□□□□□ -1.74
LMNB1-207ENST00000494185 ZSCAN29Q8IWY8 852 aaPredicted RBP4.21□□□□□ -1.74
LMNB1-207ENST00000494185 ETFBKMTQ8IXQ9 262 aa4.21□□□□□ -1.74
LMNB1-207ENST00000494185 GPR161Q8N6U8 529 aaKnown RBP4.21□□□□□ -1.74
LMNB1-207ENST00000494185 TMC1Q8TDI8 760 aa4.21□□□□□ -1.74
LMNB1-207ENST00000494185 ADARB2-AS1A8MUL3 147 aa4.2□□□□□ -1.74
LMNB1-207ENST00000494185 GNB5O14775 395 aa4.2□□□□□ -1.74
LMNB1-207ENST00000494185 CELA2BP08218 269 aaPredicted RBP4.2□□□□□ -1.74
LMNB1-207ENST00000494185 EPXP11678 715 aa4.2□□□□□ -1.74
LMNB1-207ENST00000494185 EIF1AXP47813 144 aaKnown RBP4.2□□□□□ -1.74
LMNB1-207ENST00000494185 NRLP54845 237 aa4.2□□□□□ -1.74
LMNB1-207ENST00000494185 PCBP4P57723 403 aaKnown RBP4.2□□□□□ -1.74
LMNB1-207ENST00000494185 CTBSQ01459 385 aa4.2□□□□□ -1.74
LMNB1-207ENST00000494185 SFSWAPQ12872 951 aaKnown RBP4.2□□□□□ -1.74
LMNB1-207ENST00000494185 C8orf34Q49A92 452 aa4.2□□□□□ -1.74
LMNB1-207ENST00000494185 GPR152Q8TDT2 470 aa4.2□□□□□ -1.74
LMNB1-207ENST00000494185 SNX29Q8TEQ0 813 aa4.2□□□□□ -1.74
LMNB1-207ENST00000494185 DMRTB1Q96MA1 342 aa4.2□□□□□ -1.74
LMNB1-207ENST00000494185 IGFLR1Q9H665 355 aa4.2□□□□□ -1.74
LMNB1-207ENST00000494185 ABI2Q9NYB9 513 aaPredicted RBP4.2□□□□□ -1.74
LMNB1-207ENST00000494185 DMGDHQ9UI17 866 aaKnown RBP4.2□□□□□ -1.74
LMNB1-207ENST00000494185 ZBTB39O15060 712 aa4.19□□□□□ -1.74
LMNB1-207ENST00000494185 LILRB5O75023 590 aa4.19□□□□□ -1.74
LMNB1-207ENST00000494185 SMNDC1O75940 238 aaKnown RBP eCLIP4.19□□□□□ -1.74
LMNB1-207ENST00000494185 GPLD1P80108 840 aa4.19□□□□□ -1.74
LMNB1-207ENST00000494185 HYAL2Q12891 473 aa4.19□□□□□ -1.74
LMNB1-207ENST00000494185 PRRT3Q5FWE3 981 aa4.19□□□□□ -1.74
LMNB1-207ENST00000494185 FAM26DQ5JW98 314 aa4.19□□□□□ -1.74
LMNB1-207ENST00000494185 LCE2AQ5TA79 106 aaPredicted RBP4.19□□□□□ -1.74
LMNB1-207ENST00000494185 CHSY3Q70JA7 882 aa4.19□□□□□ -1.74
LMNB1-207ENST00000494185 SND1Q7KZF4 910 aaKnown RBP eCLIP4.19□□□□□ -1.746e-8■□□□□ 9.8
LMNB1-207ENST00000494185 DHX32Q7L7V1 743 aaKnown RBP4.19□□□□□ -1.74
LMNB1-207ENST00000494185 EDEM1Q92611 657 aa4.19□□□□□ -1.74
LMNB1-207ENST00000494185 ACDQ96AP0 544 aa4.19□□□□□ -1.74
LMNB1-207ENST00000494185 NUDT16Q96DE0 195 aaKnown RBP4.19□□□□□ -1.74
LMNB1-207ENST00000494185 GSX2Q9BZM3 304 aa4.19□□□□□ -1.74
LMNB1-207ENST00000494185 GZF1Q9H116 711 aaPredicted RBP4.19□□□□□ -1.74
LMNB1-207ENST00000494185 MUC3BQ9H195 1237 aa4.19□□□□□ -1.74
LMNB1-207ENST00000494185 FRRS1LQ9P0K9 344 aa4.19□□□□□ -1.74
LMNB1-207ENST00000494185 OPLAHO14841 1288 aa4.18□□□□□ -1.74
LMNB1-207ENST00000494185 PHACTR2O75167 634 aa4.18□□□□□ -1.74
LMNB1-207ENST00000494185 RGS9O75916 674 aaPredicted RBP4.18□□□□□ -1.74
LMNB1-207ENST00000494185 EDN3P14138 238 aa4.18□□□□□ -1.74
LMNB1-207ENST00000494185 EIF2AK2P19525 551 aaKnown RBP4.18□□□□□ -1.74
LMNB1-207ENST00000494185 RAC1P63000 192 aa4.18□□□□□ -1.74
LMNB1-207ENST00000494185 ARHGAP4P98171 946 aa4.18□□□□□ -1.74
LMNB1-207ENST00000494185 KRT76Q01546 638 aa4.18□□□□□ -1.74
LMNB1-207ENST00000494185 TRIM26Q12899 539 aaPredicted RBP4.18□□□□□ -1.74
LMNB1-207ENST00000494185 ZNF385CQ66K41 422 aaPredicted RBP4.18□□□□□ -1.74
LMNB1-207ENST00000494185 ELMSAN1Q6PJG2 1045 aa4.18□□□□□ -1.74
LMNB1-207ENST00000494185 KRT25Q7Z3Z0 450 aa4.18□□□□□ -1.74
LMNB1-207ENST00000494185 FAM35AQ86V20 835 aa4.18□□□□□ -1.74
LMNB1-207ENST00000494185 ATCAYQ86WG3 371 aa4.18□□□□□ -1.74
LMNB1-207ENST00000494185 NCAPG2Q86XI2 1143 aa4.18□□□□□ -1.74
LMNB1-207ENST00000494185 NACC1Q96RE7 527 aa4.18□□□□□ -1.74
LMNB1-207ENST00000494185 SRA1Q9HD15 236 aaKnown RBP4.18□□□□□ -1.74
LMNB1-207ENST00000494185 TLR7Q9NYK1 1049 aaKnown RBP4.18□□□□□ -1.74
LMNB1-207ENST00000494185 PDGFAP04085 211 aa4.17□□□□□ -1.74
LMNB1-207ENST00000494185 CES1P23141 567 aa4.17□□□□□ -1.74
LMNB1-207ENST00000494185 CABP4P57796 275 aa4.17□□□□□ -1.74
LMNB1-207ENST00000494185 ATP2B2Q01814 1243 aa4.17□□□□□ -1.74
LMNB1-207ENST00000494185 ECM1Q16610 540 aa4.17□□□□□ -1.74
LMNB1-207ENST00000494185 FAM117BQ6P1L5 589 aa4.17□□□□□ -1.74
LMNB1-207ENST00000494185 LYPD4Q6UWN0 246 aa4.17□□□□□ -1.74
LMNB1-207ENST00000494185 RAB44Q7Z6P3 723 aaPredicted RBP4.17□□□□□ -1.74
LMNB1-207ENST00000494185 MAP4K3Q8IVH8 894 aa4.17□□□□□ -1.74
LMNB1-207ENST00000494185 TRPM4Q8TD43 1214 aa4.17□□□□□ -1.74
LMNB1-207ENST00000494185 SLC30A3Q99726 388 aa4.17□□□□□ -1.74
LMNB1-207ENST00000494185 JPH1Q9HDC5 661 aaPredicted RBP4.17□□□□□ -1.74
LMNB1-207ENST00000494185 STRN4Q9NRL3 753 aa4.17□□□□□ -1.74
LMNB1-207ENST00000494185 DNAJB12Q9NXW2 375 aaKnown RBP4.17□□□□□ -1.74
LMNB1-207ENST00000494185 DCTN4Q9UJW0 460 aa4.17□□□□□ -1.74
LMNB1-207ENST00000494185 SLC6A14Q9UN76 642 aa4.17□□□□□ -1.74
LMNB1-207ENST00000494185 POLIQ9UNA4 740 aa4.17□□□□□ -1.74
LMNB1-207ENST00000494185 FZD6O60353 706 aa4.16□□□□□ -1.74
LMNB1-207ENST00000494185 SASH3O75995 380 aa4.16□□□□□ -1.74
LMNB1-207ENST00000494185 HOXD8P13378 290 aaPredicted RBP4.16□□□□□ -1.74
LMNB1-207ENST00000494185 ERCC3P19447 782 aa4.16□□□□□ -1.74
LMNB1-207ENST00000494185 MAPK1P28482 360 aa4.16□□□□□ -1.74
LMNB1-207ENST00000494185 TMCO4Q5TGY1 634 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms